RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 ARMC10Q8N2F6 343 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 ARIH2OSQ8N7S6 290 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 LGALS14Q8TCE9 139 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 TSSK2Q96PF2 358 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 SDHCQ99643 169 aaPredicted RBP14.8□□□□□ -0.04
CTCF-201ENST00000264010 NUBP2Q9Y5Y2 271 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 VSTM2BA6NLU5 285 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 IMPA2O14732 288 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 EIF4EP06730 217 aaKnown RBP14.8□□□□□ -0.04
CTCF-201ENST00000264010 NR2C1P13056 603 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 OR4K17Q8NGC6 315 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 ST7LQ8TDW4 575 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 LMF1Q96S06 567 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 DEFB126Q9BYW3 111 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 TINAGL1Q9GZM7 467 aaPredicted RBP14.8□□□□□ -0.04
CTCF-201ENST00000264010 CAMK2AQ9UQM7 478 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 PRELID3BQ9Y3B1 194 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 OR6C76A6NM76 312 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 A8MVM7 634 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 ARPC1BO15143 372 aaKnown RBP14.79□□□□□ -0.04
CTCF-201ENST00000264010 HYAL3O43820 417 aaPredicted RBP14.79□□□□□ -0.04
CTCF-201ENST00000264010 CCR6P51684 374 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 SLC37A1P57057 533 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 ADAM8P78325 824 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 CD226Q15762 336 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 Q499Y3 187 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 UBE2NLQ5JXB2 153 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 LIPNQ5VXI9 398 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 ADAM5Q6NVV9 412 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 CBLN3Q6UW01 205 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 RDH10Q8IZV5 341 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 EXO5Q9H790 373 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 UNKLQ9H9P5 680 aaKnown RBP14.79□□□□□ -0.04
CTCF-201ENST00000264010 KLHL9Q9P2J3 617 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 CABIN1Q9Y6J0 2220 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 HLA-DMAP28067 261 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 SLC25A1P53007 311 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 PNLIPRP2P54317 469 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 FAM69AQ5T7M9 428 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 GLT8D1Q68CQ7 371 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 C5orf46Q6UWT4 87 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 PTPMT1Q8WUK0 201 aaPredicted RBP14.79□□□□□ -0.04
CTCF-201ENST00000264010 KIF26AQ9ULI4 1882 aaPredicted RBP14.79□□□□□ -0.04
CTCF-201ENST00000264010 SNRNP200O75643 2136 aaKnown RBP14.79□□□□□ -0.04
CTCF-201ENST00000264010 A6NIZ1 184 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 P2RX1P51575 399 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 RAP1BP61224 184 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 RAP1AP62834 184 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 ISXQ2M1V0 245 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 SLC25A35Q3KQZ1 300 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 OR5M10Q6IEU7 315 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 ASB17Q8WXJ9 295 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 WWTR1Q9GZV5 400 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 DHDHQ9UQ10 334 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 KIAA1549LQ6ZVL6 1849 aa14.79□□□□□ -0.04
CTCF-201ENST00000264010 ACSM4P0C7M7 580 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 RFX2P48378 723 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 AIMP2Q13155 320 aaKnown RBP14.78□□□□□ -0.04
CTCF-201ENST00000264010 GPR176Q14439 515 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 FCRLAQ7L513 359 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 GRINAQ7Z429 371 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 SYT9Q86SS6 491 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 ATG4DQ86TL0 474 aaPredicted RBP14.78□□□□□ -0.04
CTCF-201ENST00000264010 NPEPL1Q8NDH3 523 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 CCDC74AQ96AQ1 378 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 ZNF346Q9UL40 294 aaKnown RBP14.78□□□□□ -0.04
CTCF-201ENST00000264010 HIF3AQ9Y2N7 669 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 A0A1W2PR77 199 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 CREBL2O60519 120 aaPredicted RBP14.78□□□□□ -0.04
CTCF-201ENST00000264010 LYPD3O95274 346 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 KLK3P07288 261 aaPredicted RBP14.78□□□□□ -0.04
CTCF-201ENST00000264010 SNRNP70P08621 437 aaKnown RBP14.78□□□□□ -0.04
CTCF-201ENST00000264010 CD63P08962 238 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 GAAP10253 952 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 FXYD6P3P58550 94 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 GLO1Q04760 184 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 C1orf140Q5VVS0 124 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 SLC25A24Q6NUK1 477 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 TEX261Q6UWH6 196 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 KTI12Q96EK9 354 aaPredicted RBP14.78□□□□□ -0.04
CTCF-201ENST00000264010 U3KQ87 197 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 C9J4A7 227 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 NGFRP08138 427 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 LIPCP11150 499 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 FOLR1P15328 257 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 VASNQ6EMK4 673 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 OR1N1Q8NGS0 311 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 LHFPL5Q8TAF8 219 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 STT3BQ8TCJ2 826 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 PAQR8Q8TEZ7 354 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 GIMAP1Q8WWP7 306 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 DDIT4LQ96D03 193 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 LINC00052Q96N35 136 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 ELOVL3Q9HB03 270 aa14.78□□□□□ -0.04
CTCF-201ENST00000264010 TICRRQ7Z2Z1 1910 aa14.77□□□□□ -0.04
CTCF-201ENST00000264010 TMEM212A6NML5 194 aa14.77□□□□□ -0.04
CTCF-201ENST00000264010 TGFBR3LH3BV60 316 aa14.77□□□□□ -0.04
CTCF-201ENST00000264010 OGG1O15527 345 aa14.77□□□□□ -0.04
CTCF-201ENST00000264010 TLX3O43711 291 aaPredicted RBP14.77□□□□□ -0.04
CTCF-201ENST00000264010 SCRG1O75711 98 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms