RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 C12orf40Q86WS4 652 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 OR6N2Q8NGY6 317 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 ARSGQ96EG1 525 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 SAT2Q96F10 170 aaPredicted RBP11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 SLC41A2Q96JW4 573 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 RNF122Q9H9V4 155 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 FBXO4Q9UKT5 387 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 NOSIPQ9Y314 301 aaKnown RBP11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 MEX3AA1L020 520 aaKnown RBP11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 C9orf170A2RU37 121 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 TVP23AA6NH52 213 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 YKT6O15498 198 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 LATO43561 262 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 FGF17O60258 216 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 FGF18O76093 207 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 NPBWR1P48145 328 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 IL13RA1P78552 427 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 MGAT2Q10469 447 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 RNASE10Q5GAN6 216 aaKnown RBP11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 FBXO42Q6P3S6 717 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 C15orf54Q8N8G6 183 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 ZSCAN1Q8NBB4 408 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 RCBTB1Q8NDN9 531 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 OR4E2Q8NGC2 313 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 DOK4Q8TEW6 326 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 LIPHQ8WWY8 451 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 ASB17Q8WXJ9 295 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 CTHRC1Q96CG8 243 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 ARL5BQ96KC2 179 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 LMF2Q9BU23 707 aaKnown RBP11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 SRA1Q9HD15 236 aaKnown RBP11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 MBNL1Q9NR56 388 aaKnown RBP11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 FARSAQ9Y285 508 aaKnown RBP11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 HIF3AQ9Y2N7 669 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 A0A087WV48 116 aa11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 BLOC1S5-TXNDC5H3BN57 136 aa11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 CCSO14618 274 aa11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 DOK2O60496 412 aa11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 S100A6P06703 90 aa11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 DCNP07585 359 aaKnown RBP11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 ACAA1P09110 424 aaPredicted RBP11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 PNMTP11086 282 aa11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 CSF2RAP15509 400 aa11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 HTR2CP28335 458 aa11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 ARRB1P49407 418 aaPredicted RBP11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 CTXN1P60606 82 aa11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 ECH1Q13011 328 aa11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 ALG10Q5BKT4 473 aa11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 EIF5AL1Q6IS14 154 aaKnown RBP11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 PAPD4Q6PIY7 484 aaKnown RBP11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 LSRQ86X29 649 aaPredicted RBP11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 OR52R1Q8NGF1 315 aa11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 OR13C8Q8NGS7 320 aa11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 OR10AC1Q8NH08 325 aa11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 NANPQ8TBE9 248 aa11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 SMARCD2Q92925 531 aa11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 PTX4Q96A99 478 aa11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 INTS14Q96SY0 518 aa11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 ADAT1Q9BUB4 502 aaKnown RBP11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 G6PC3Q9BUM1 346 aa11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 CHMP1AQ9HD42 196 aaPredicted RBP11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 WBP1LQ9NX94 342 aa11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 GRHPRQ9UBQ7 328 aa11.21□□□□□ -0.61
CHMP2B-201ENST00000263780 TRBV6-7A0A0A0MS04 114 aa11.21□□□□□ -0.62
CHMP2B-201ENST00000263780 PRR19A6NJB7 356 aa11.21□□□□□ -0.62
CHMP2B-201ENST00000263780 OR6C76A6NM76 312 aa11.21□□□□□ -0.62
CHMP2B-201ENST00000263780 MAOAP21397 527 aa11.21□□□□□ -0.62
CHMP2B-201ENST00000263780 PTAFRP25105 342 aa11.21□□□□□ -0.62
CHMP2B-201ENST00000263780 AQP2P41181 271 aa11.21□□□□□ -0.62
CHMP2B-201ENST00000263780 PTGFRP43088 359 aa11.21□□□□□ -0.62
CHMP2B-201ENST00000263780 CX3CR1P49238 355 aa11.21□□□□□ -0.62
CHMP2B-201ENST00000263780 SKP1P63208 163 aa11.21□□□□□ -0.62
CHMP2B-201ENST00000263780 CCINQ13939 588 aa11.21□□□□□ -0.62
CHMP2B-201ENST00000263780 IGSF11Q5DX21 431 aa11.21□□□□□ -0.62
CHMP2B-201ENST00000263780 BIVMQ86UB2 503 aa11.21□□□□□ -0.62
CHMP2B-201ENST00000263780 ETFBKMTQ8IXQ9 262 aa11.21□□□□□ -0.62
CHMP2B-201ENST00000263780 PRSS35Q8N3Z0 413 aa11.21□□□□□ -0.62
CHMP2B-201ENST00000263780 C10orf53Q8N6V4 93 aa11.21□□□□□ -0.62
CHMP2B-201ENST00000263780 C2CD4CQ8TF44 421 aa11.21□□□□□ -0.62
CHMP2B-201ENST00000263780 OR2A5Q96R48 311 aa11.21□□□□□ -0.62
CHMP2B-201ENST00000263780 SLC6A7Q99884 636 aa11.21□□□□□ -0.62
CHMP2B-201ENST00000263780 CRB3Q9BUF7 120 aa11.21□□□□□ -0.62
CHMP2B-201ENST00000263780 DHDHQ9UQ10 334 aa11.21□□□□□ -0.62
CHMP2B-201ENST00000263780 A0A1B0GTH9 108 aa11.2□□□□□ -0.62
CHMP2B-201ENST00000263780 LINC01387J3KSC0 135 aa11.2□□□□□ -0.62
CHMP2B-201ENST00000263780 AKR7A3O95154 331 aa11.2□□□□□ -0.62
CHMP2B-201ENST00000263780 DUS4LO95620 317 aaKnown RBP11.2□□□□□ -0.62
CHMP2B-201ENST00000263780 CSTAP01040 98 aa11.2□□□□□ -0.62
CHMP2B-201ENST00000263780 CRHP06850 196 aa11.2□□□□□ -0.62
CHMP2B-201ENST00000263780 PGAM2P15259 253 aa11.2□□□□□ -0.62
CHMP2B-201ENST00000263780 S100PP25815 95 aa11.2□□□□□ -0.62
CHMP2B-201ENST00000263780 TAS2R31P59538 309 aa11.2□□□□□ -0.62
CHMP2B-201ENST00000263780 SP3Q02447 781 aa11.2□□□□□ -0.62
CHMP2B-201ENST00000263780 PMPCAQ10713 525 aa11.2□□□□□ -0.62
CHMP2B-201ENST00000263780 ENPP2Q13822 863 aa11.2□□□□□ -0.62
CHMP2B-201ENST00000263780 KIR2DS3Q14952 304 aa11.2□□□□□ -0.62
CHMP2B-201ENST00000263780 SMAD2Q15796 467 aaKnown RBP11.2□□□□□ -0.62
CHMP2B-201ENST00000263780 PLEKHN1Q494U1 663 aaPredicted RBP11.2□□□□□ -0.62
CHMP2B-201ENST00000263780 RNF212Q495C1 297 aa11.2□□□□□ -0.62
CHMP2B-201ENST00000263780 FAM109BQ6ICB4 259 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms