RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 GLIPR1L1Q6UWM5 242 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 PRSS35Q8N3Z0 413 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 BAHD1Q8TBE0 780 aaPredicted RBP9.85□□□□□ -0.83
CD44-201ENST00000263398 SECTM1Q8WVN6 248 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 CSF3RQ99062 836 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 OCSTAMPQ9BR26 566 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.85□□□□□ -0.83
CD44-201ENST00000263398 C19orf12Q9NSK7 152 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 SDHAF2Q9NX18 166 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 PRAMEF25A6NGN4 478 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 M0R082 166 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 NSA2O95478 260 aaKnown RBP9.85□□□□□ -0.83
CD44-201ENST00000263398 CBX7O95931 251 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 ITGBL1O95965 494 aaPredicted RBP9.85□□□□□ -0.83
CD44-201ENST00000263398 SERPINA7P05543 415 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 FKBP2P26885 142 aaKnown RBP9.85□□□□□ -0.83
CD44-201ENST00000263398 GRB2P62993 217 aaKnown RBP9.85□□□□□ -0.83
CD44-201ENST00000263398 IKZF1Q13422 519 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 CTF1Q16619 201 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 HAS2Q92819 552 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 SDSLQ96GA7 329 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 RHNO1Q9BSD3 238 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 OBP2BQ9NPH6 170 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 ZNF225Q9UK10 706 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 CEP290O15078 2479 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 CCDC163A0A0D9SF12 145 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 H0Y8X5 98 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 AIPO00170 330 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 ALOX12BO75342 701 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 ABHD16AO95870 558 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 MSR1P21757 451 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 APOBEC1P41238 236 aaKnown RBP9.85□□□□□ -0.83
CD44-201ENST00000263398 PPICP45877 212 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 CAMK2BQ13554 666 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 LIMS2Q7Z4I7 341 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 KDM8Q8N371 416 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 ARIH2OSQ8N7S6 290 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 PLPP5Q8NEB5 264 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 ELSPBP1Q96BH3 223 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 SMIM19Q96E16 107 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 CNRIP1Q96F85 164 aaPredicted RBP9.85□□□□□ -0.83
CD44-201ENST00000263398 MED18Q9BUE0 208 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 TCEAL2Q9H3H9 227 aaPredicted RBP9.85□□□□□ -0.83
CD44-201ENST00000263398 QPCTLQ9NXS2 382 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 TMEFF2Q9UIK5 374 aaPredicted RBP9.85□□□□□ -0.83
CD44-201ENST00000263398 CXCL10P02778 98 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 CD46P15529 392 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 ANXA7P20073 488 aaKnown RBP9.85□□□□□ -0.83
CD44-201ENST00000263398 NME2P22392 152 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 TNFSF4P23510 183 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 IL32P24001 234 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 B4GALNT1Q00973 533 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 CDK5R1Q15078 307 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 GLYR1Q49A26 553 aaPredicted RBP9.85□□□□□ -0.83
CD44-201ENST00000263398 ARSJQ5FYB0 599 aaPredicted RBP9.85□□□□□ -0.83
CD44-201ENST00000263398 AADACL3Q5VUY0 350 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 YOD1Q5VVQ6 348 aaPredicted RBP9.85□□□□□ -0.83
CD44-201ENST00000263398 TIGD3Q6B0B8 471 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 PARM1Q6UWI2 310 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 CNEP1R1Q8N9A8 125 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 HSD17B8Q92506 261 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 MRPL38Q96DV4 380 aaKnown RBP9.85□□□□□ -0.83
CD44-201ENST00000263398 TSSK2Q96PF2 358 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 PIGQQ9BRB3 760 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 CHRNA9Q9UGM1 479 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 OTOL1A6NHN0 477 aaPredicted RBP9.84□□□□□ -0.83
CD44-201ENST00000263398 ZNF749O43361 778 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 PRAMEF4O60810 478 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 CSF3P09919 207 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 OMGP23515 440 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 PDLIM3Q53GG5 364 aaPredicted RBP9.84□□□□□ -0.83
CD44-201ENST00000263398 FAM122BQ7Z309 247 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 FAM213BQ8TBF2 198 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 TAAR8Q969N4 342 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 PRMT8Q9NR22 394 aaPredicted RBP9.84□□□□□ -0.83
CD44-201ENST00000263398 MYOTQ9UBF9 498 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 TRAPPC2LQ9UL33 140 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 NOSIPQ9Y314 301 aaKnown RBP9.84□□□□□ -0.83
CD44-201ENST00000263398 GMDSO60547 372 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 SOD1P00441 154 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 ENPP1P22413 925 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 UBE2KP61086 200 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 SOHLH1Q5JUK2 328 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 ZNF813Q6ZN06 617 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 GRAMD2AQ8IUY3 354 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 EDAQ92838 391 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 CPNE4Q96A23 557 aaPredicted RBP9.84□□□□□ -0.83
CD44-201ENST00000263398 ABHD6Q9BV23 337 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 FKRPQ9H9S5 495 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 MED16Q9Y2X0 877 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 A0A0U1RQK1 487 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 LOC107986453A0A1B0GWG9 222 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 ANKRD34BA5PLL1 514 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 ASPDHA6ND91 283 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 IFITM5A6NNB3 132 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 PMP2P02689 132 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 C1QAP02745 245 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 GZMKP49863 264 aa9.84□□□□□ -0.83
CD44-201ENST00000263398 ZNF133P52736 654 aaPredicted RBP9.84□□□□□ -0.83
CD44-201ENST00000263398 CARD18P57730 90 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms