RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 KIRREL2Q6UWL6 708 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 ZNF595Q8IYB9 648 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 GPR148Q8TDV2 347 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 GTF3AQ92664 365 aaKnown RBP13.58□□□□□ -0.24
XRCC1-201ENST00000262887 SEH1LQ96EE3 360 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 LMAN2LQ9H0V9 348 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 RNF122Q9H9V4 155 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 DNAJB12Q9NXW2 375 aaKnown RBP13.58□□□□□ -0.24
XRCC1-201ENST00000262887 NUP210LQ5VU65 1888 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 C5orf52A6NGY3 159 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 OR2T1O43869 369 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 FARS2O95363 451 aaKnown RBP13.57□□□□□ -0.24
XRCC1-201ENST00000262887 SLC35G6P0C7Q6 338 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 GPX4P36969 197 aaPredicted RBP13.57□□□□□ -0.24
XRCC1-201ENST00000262887 VEGFBP49765 207 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 CXADRP78310 365 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 EXOSC6Q5RKV6 272 aaKnown RBP13.57□□□□□ -0.24
XRCC1-201ENST00000262887 ZCCHC12Q6PEW1 402 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 ZNF784Q8NCA9 323 aaPredicted RBP13.57□□□□□ -0.24
XRCC1-201ENST00000262887 FAM3DQ96BQ1 224 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 C8orf33Q9H7E9 229 aaPredicted RBP13.57□□□□□ -0.24
XRCC1-201ENST00000262887 TMEM74BQ9NUR3 256 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 DAPP1Q9UN19 280 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 LOC100289279A0A1B0GTE1 492 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 OR4C45A6NMZ5 311 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 C1QTNF3-AMACRE9PGA6 284 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 UBE2CO00762 179 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 ALOX12BO75342 701 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 MOSPD3O75425 235 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 ADH5P11766 374 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 RELQ04864 619 aaPredicted RBP13.57□□□□□ -0.24
XRCC1-201ENST00000262887 AIMP2Q13155 320 aaKnown RBP13.57□□□□□ -0.24
XRCC1-201ENST00000262887 RAB11BQ15907 218 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 DEFB115Q30KQ5 88 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 EEF1A1P5Q5VTE0 462 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 LILRA6Q6PI73 481 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 LINC00114Q6XXX2 140 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 IL34Q6ZMJ4 242 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 PARGQ86W56 976 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 CACUL1Q86Y37 369 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 BAP18Q8IXM2 172 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 OR2G2Q8NGZ5 317 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 EDEM2Q9BV94 578 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 ACKR4Q9NPB9 350 aa13.57□□□□□ -0.24
XRCC1-201ENST00000262887 FARSAQ9Y285 508 aaKnown RBP13.57□□□□□ -0.24
XRCC1-201ENST00000262887 EML5Q05BV3 1969 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 ZNF860A6NHJ4 632 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 C1orf196B1AJZ1 125 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 F8VVB4 439 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 F8VWA3 439 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 KCNAB3O43448 404 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 B3GALT2O43825 422 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 ICOSLGO75144 302 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 ABHD16AO95870 558 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 CXCL10P02778 98 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 KLK3P07288 261 aaPredicted RBP13.56□□□□□ -0.24
XRCC1-201ENST00000262887 HLA-GP17693 338 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 CDKN2AP42771 156 aaKnown RBP13.56□□□□□ -0.24
XRCC1-201ENST00000262887 PJVKQ0ZLH3 352 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 GFOD2Q3B7J2 385 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 NKAPLQ5M9Q1 402 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 LHX8Q68G74 356 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 ZNF627Q7L945 461 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 BPIFB2Q8N4F0 458 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 SLC30A7Q8NEW0 376 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 TSEN15Q8WW01 171 aaKnown RBP13.56□□□□□ -0.24
XRCC1-201ENST00000262887 CPNE2Q96FN4 548 aaPredicted RBP13.56□□□□□ -0.24
XRCC1-201ENST00000262887 SERINC2Q96SA4 455 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 NKX3-1Q99801 234 aaPredicted RBP13.56□□□□□ -0.24
XRCC1-201ENST00000262887 MBNL1Q9NR56 388 aaKnown RBP13.56□□□□□ -0.24
XRCC1-201ENST00000262887 SLC17A5Q9NRA2 495 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 UFSP2Q9NUQ7 469 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 GHRLQ9UBU3 117 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 LAMP5Q9UJQ1 280 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 C2orf74A8MZ97 194 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 ZNF208O43345 1280 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 CD74P04233 296 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 ZNF735P0CB33 412 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 PGAM2P15259 253 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 EIF2S3LQ2VIR3 472 aaKnown RBP13.56□□□□□ -0.24
XRCC1-201ENST00000262887 PMM1Q92871 262 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 WDR77Q9BQA1 342 aaPredicted RBP13.56□□□□□ -0.24
XRCC1-201ENST00000262887 NRIP2Q9BQI9 281 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 RCC2Q9P258 522 aaKnown RBP13.56□□□□□ -0.24
XRCC1-201ENST00000262887 SCN2AQ99250 2005 aa13.56□□□□□ -0.24
XRCC1-201ENST00000262887 A0A087WV62 115 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 CPED1A4D0V7 1026 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 TMEM212A6NML5 194 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 ZNF736B4DX44 427 aaPredicted RBP13.55□□□□□ -0.24
XRCC1-201ENST00000262887 CYB5AP00167 134 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 CSN2P05814 226 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 RPS15AP62244 130 aaKnown RBP13.55□□□□□ -0.24
XRCC1-201ENST00000262887 ALG11Q2TAA5 492 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 RNF212Q495C1 297 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 PRRT3Q5FWE3 981 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 ABHD13Q7L211 337 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 LYG2Q86SG7 212 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 NAA40Q86UY6 237 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 OR10R2Q8NGX6 335 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 TMED6Q8WW62 240 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms