RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 SKA3Q8IX90 412 aa16.36■□□□□ 0.21
CYSTM1-201ENST00000261811 LNX2Q8N448 690 aa16.36■□□□□ 0.21
CYSTM1-201ENST00000261811 OR4K13Q8NH42 304 aa16.36■□□□□ 0.21
CYSTM1-201ENST00000261811 WACQ9BTA9 647 aa16.36■□□□□ 0.21
CYSTM1-201ENST00000261811 PAPOLBQ9NRJ5 636 aaKnown RBP16.36■□□□□ 0.21
CYSTM1-201ENST00000261811 NPAP1Q9NZP6 1156 aa16.36■□□□□ 0.21
CYSTM1-201ENST00000261811 CRNNQ9UBG3 495 aaPredicted RBP16.36■□□□□ 0.21
CYSTM1-201ENST00000261811 TACC2O95359 2948 aa16.35■□□□□ 0.21
CYSTM1-201ENST00000261811 HRNRQ86YZ3 2850 aaPredicted RBP16.35■□□□□ 0.21
CYSTM1-201ENST00000261811 BHLHE40O14503 412 aa16.35■□□□□ 0.21
CYSTM1-201ENST00000261811 IGKV3-15P01624 115 aa16.35■□□□□ 0.21
CYSTM1-201ENST00000261811 HLA-HP01893 362 aa16.35■□□□□ 0.21
CYSTM1-201ENST00000261811 HIST1H1CP16403 213 aaKnown RBP16.35■□□□□ 0.21
CYSTM1-201ENST00000261811 POU1F1P28069 291 aa16.35■□□□□ 0.21
CYSTM1-201ENST00000261811 CDKN2AP42771 156 aaKnown RBP16.35■□□□□ 0.21
CYSTM1-201ENST00000261811 PTDSS1P48651 473 aaKnown RBP16.35■□□□□ 0.21
CYSTM1-201ENST00000261811 PLP2Q04941 152 aa16.35■□□□□ 0.21
CYSTM1-201ENST00000261811 PIGFQ07326 219 aa16.35■□□□□ 0.21
CYSTM1-201ENST00000261811 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.35■□□□□ 0.21
CYSTM1-201ENST00000261811 NPRL3Q12980 569 aa16.35■□□□□ 0.21
CYSTM1-201ENST00000261811 SLC35F1Q5T1Q4 408 aa16.35■□□□□ 0.21
CYSTM1-201ENST00000261811 GLB1L2Q8IW92 636 aa16.35■□□□□ 0.21
CYSTM1-201ENST00000261811 HS3ST5Q8IZT8 346 aa16.35■□□□□ 0.21
CYSTM1-201ENST00000261811 LRRC18Q8N456 261 aa16.35■□□□□ 0.21
CYSTM1-201ENST00000261811 OR52E2Q8NGJ4 325 aa16.35■□□□□ 0.21
CYSTM1-201ENST00000261811 HS3ST6Q96QI5 342 aa16.35■□□□□ 0.21
CYSTM1-201ENST00000261811 TMEM204Q9BSN7 226 aa16.35■□□□□ 0.21
CYSTM1-201ENST00000261811 PLA2G12AQ9BZM1 189 aa16.35■□□□□ 0.21
CYSTM1-201ENST00000261811 SEMA6AQ9H2E6 1030 aa16.35■□□□□ 0.21
CYSTM1-201ENST00000261811 UBTD1Q9HAC8 227 aa16.35■□□□□ 0.21
CYSTM1-201ENST00000261811 KRT84Q9NSB2 600 aa16.35■□□□□ 0.21
CYSTM1-201ENST00000261811 RAI1Q7Z5J4 1906 aaPredicted RBP16.35■□□□□ 0.21
CYSTM1-201ENST00000261811 RIIAD1A6NNX1 92 aa16.34■□□□□ 0.21
CYSTM1-201ENST00000261811 HMGN1P05114 100 aa16.34■□□□□ 0.21
CYSTM1-201ENST00000261811 MSR1P21757 451 aa16.34■□□□□ 0.21
CYSTM1-201ENST00000261811 LAP3P28838 519 aa16.34■□□□□ 0.21
CYSTM1-201ENST00000261811 CENPAP49450 140 aa16.34■□□□□ 0.21
CYSTM1-201ENST00000261811 FAM27BQ5VT28 67 aa16.34■□□□□ 0.21
CYSTM1-201ENST00000261811 ADAM5Q6NVV9 412 aa16.34■□□□□ 0.21
CYSTM1-201ENST00000261811 C20orf204Q6ZNR8 217 aa16.34■□□□□ 0.21
CYSTM1-201ENST00000261811 PTCHD4Q6ZW05 846 aa16.34■□□□□ 0.21
CYSTM1-201ENST00000261811 MDP1Q86V88 176 aa16.34■□□□□ 0.21
CYSTM1-201ENST00000261811 ICA1LQ8NDH6 482 aa16.34■□□□□ 0.21
CYSTM1-201ENST00000261811 NMNAT3Q96T66 252 aa16.34■□□□□ 0.21
CYSTM1-201ENST00000261811 SH3GL3Q99963 347 aa16.34■□□□□ 0.21
CYSTM1-201ENST00000261811 PRRG3Q9BZD7 231 aa16.34■□□□□ 0.21
CYSTM1-201ENST00000261811 C1orf198Q9H425 327 aa16.34■□□□□ 0.21
CYSTM1-201ENST00000261811 FAIMQ9NVQ4 179 aa16.34■□□□□ 0.21
CYSTM1-201ENST00000261811 B3GNT2Q9NY97 397 aa16.34■□□□□ 0.21
CYSTM1-201ENST00000261811 LRBAP50851 2863 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 IGHV1-18A0A0C4DH31 117 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 IQCMA0A1B0GVH7 501 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 C12orf71A8MTZ7 269 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 IGLV1-44P01699 117 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 CST2P09228 141 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 ZNF3P17036 446 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 PAICSP22234 425 aaKnown RBP16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 LOXP28300 417 aaPredicted RBP16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 CDAP32320 146 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 GRK5P34947 590 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 GIPRP48546 466 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 IDH3GP51553 393 aaPredicted RBP16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 KRTAP10-9P60411 292 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 GLO1Q04760 184 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 FAHD1Q6P587 224 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 ALDH16A1Q8IZ83 802 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 PARP8Q8N3A8 854 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 SDR9C7Q8NEX9 313 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 OR8D4Q8NGM9 314 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 OR2T4Q8NH00 348 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 AKAP1Q92667 903 aaKnown RBP eCLIP16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 FBXW5Q969U6 566 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 PLEKHA8Q96JA3 519 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 NUAK2Q9H093 628 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 GABARAPL1Q9H0R8 117 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 PLEKHF2Q9H8W4 249 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 S100A14Q9HCY8 104 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 SRA1Q9HD15 236 aaKnown RBP16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 RPRD1BQ9NQG5 326 aaKnown RBP16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 REV1Q9UBZ9 1251 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 SPEF1Q9Y4P9 236 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 UGT2A1Q9Y4X1 527 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 ORC6Q9Y5N6 252 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 FKBP7Q9Y680 259 aa16.33■□□□□ 0.2
CYSTM1-201ENST00000261811 IGKV1D-43A0A0B4J1Z2 117 aa16.32■□□□□ 0.2
CYSTM1-201ENST00000261811 VSTM5A8MXK1 200 aa16.32■□□□□ 0.2
CYSTM1-201ENST00000261811 HS3ST1O14792 307 aa16.32■□□□□ 0.2
CYSTM1-201ENST00000261811 CECR9P0C854 216 aa16.32■□□□□ 0.2
CYSTM1-201ENST00000261811 CTLA4P16410 223 aa16.32■□□□□ 0.2
CYSTM1-201ENST00000261811 DNASE1P24855 282 aa16.32■□□□□ 0.2
CYSTM1-201ENST00000261811 ESRRGP62508 458 aa16.32■□□□□ 0.2
CYSTM1-201ENST00000261811 HSF2Q03933 536 aa16.32■□□□□ 0.2
CYSTM1-201ENST00000261811 KEAP1Q14145 624 aa16.32■□□□□ 0.2
CYSTM1-201ENST00000261811 PGGHGQ32M88 737 aa16.32■□□□□ 0.2
CYSTM1-201ENST00000261811 ZNF672Q499Z4 452 aaPredicted RBP16.32■□□□□ 0.2
CYSTM1-201ENST00000261811 FOXL2NBQ6ZUU3 175 aa16.32■□□□□ 0.2
CYSTM1-201ENST00000261811 SYT9Q86SS6 491 aa16.32■□□□□ 0.2
CYSTM1-201ENST00000261811 CDH24Q86UP0 819 aa16.32■□□□□ 0.2
CYSTM1-201ENST00000261811 OR1J2Q8NGS2 313 aa16.32■□□□□ 0.2
CYSTM1-201ENST00000261811 NINJ1Q92982 152 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms