RNA–Protein interactions for RNA: ENST00000261302.9

FOXN3-201, Transcript of forkhead box N3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FOXN3, Length 2,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-201ENST00000261302 HIST1H2BCP62807 126 aa11.5□□□□□ -0.57
FOXN3-201ENST00000261302 MRPS11P82912 194 aaKnown RBP11.5□□□□□ -0.57
FOXN3-201ENST00000261302 NR0B2Q15466 257 aa11.5□□□□□ -0.57
FOXN3-201ENST00000261302 HIST2H2BEQ16778 126 aa11.5□□□□□ -0.57
FOXN3-201ENST00000261302 TP53I3Q53FA7 332 aa11.5□□□□□ -0.57
FOXN3-201ENST00000261302 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.5□□□□□ -0.57
FOXN3-201ENST00000261302 EIF5AL1Q6IS14 154 aaKnown RBP11.5□□□□□ -0.57
FOXN3-201ENST00000261302 NRMQ8IXM6 262 aa11.5□□□□□ -0.57
FOXN3-201ENST00000261302 MMP21Q8N119 569 aa11.5□□□□□ -0.57
FOXN3-201ENST00000261302 FRMD1Q8N878 549 aa11.5□□□□□ -0.57
FOXN3-201ENST00000261302 SMPDL3AQ92484 453 aa11.5□□□□□ -0.57
FOXN3-201ENST00000261302 DCUN1D4Q92564 292 aa11.5□□□□□ -0.57
FOXN3-201ENST00000261302 HIST1H2BHQ93079 126 aa11.5□□□□□ -0.57
FOXN3-201ENST00000261302 HIST1H2BNQ99877 126 aa11.5□□□□□ -0.57
FOXN3-201ENST00000261302 HIST1H2BMQ99879 126 aa11.5□□□□□ -0.57
FOXN3-201ENST00000261302 C20orf24Q9BUV8 137 aa11.5□□□□□ -0.57
FOXN3-201ENST00000261302 SYNPO2LQ9H987 977 aa11.5□□□□□ -0.57
FOXN3-201ENST00000261302 STARD10Q9Y365 291 aa11.5□□□□□ -0.57
FOXN3-201ENST00000261302 CSAG2Q9Y5P2 127 aa11.5□□□□□ -0.57
FOXN3-201ENST00000261302 TRBV2A0A0J9YWF9 115 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 CYTIPO60759 359 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 EFEMP2O95967 443 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 HLA-AP01891 365 aaKnown RBP11.49□□□□□ -0.57
FOXN3-201ENST00000261302 RPN2P04844 631 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 SPARCP09486 303 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 IL9P15248 144 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 SLC2A5P22732 501 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 MAP3K8P41279 467 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 SULT1A2P50226 295 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 MANFP55145 182 aaKnown RBP11.49□□□□□ -0.57
FOXN3-201ENST00000261302 GFI1BQ5VTD9 330 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 FAM46CQ5VWP2 391 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 MBOAT2Q6ZWT7 520 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 TMEM173Q86WV6 379 aaPredicted RBP11.49□□□□□ -0.57
FOXN3-201ENST00000261302 GABRG1Q8N1C3 465 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 ZNF664Q8N3J9 261 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 OR6K2Q8NGY2 324 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 MR1Q95460 341 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 SNHG12Q9BXW3 62 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 ZNF350Q9GZX5 532 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 PRDM7Q9NQW5 492 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 CUTCQ9NTM9 273 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 ZDHHC3Q9NYG2 299 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 SLC23A2Q9UGH3 650 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 MRPS18CQ9Y3D5 142 aaKnown RBP11.49□□□□□ -0.57
FOXN3-201ENST00000261302 DOCK6Q96HP0 2047 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 CDC42EP2O14613 210 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 SMAD9O15198 467 aaKnown RBP11.49□□□□□ -0.57
FOXN3-201ENST00000261302 OR2C1O95371 312 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 KLK1P06870 262 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 ZBTB25P24278 435 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 B4GALNT1Q00973 533 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 GUCA2AQ02747 115 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 JOSD1Q15040 202 aaPredicted RBP11.49□□□□□ -0.57
FOXN3-201ENST00000261302 TOMM34Q15785 309 aaPredicted RBP11.49□□□□□ -0.57
FOXN3-201ENST00000261302 FNDC3BQ53EP0 1204 aaKnown RBP11.49□□□□□ -0.57
FOXN3-201ENST00000261302 IER5LQ5T953 404 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 LANCL3Q6ZV70 420 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 PEG10Q86TG7 708 aaKnown RBP11.49□□□□□ -0.57
FOXN3-201ENST00000261302 OR9A4Q8NGU2 314 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 MAFAQ8NHW3 353 aaPredicted RBP11.49□□□□□ -0.57
FOXN3-201ENST00000261302 RSC1A1Q92681 617 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 SLC25A36Q96CQ1 311 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 NTNG2Q96CW9 530 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 RRNAD1Q96FB5 475 aaKnown RBP11.49□□□□□ -0.57
FOXN3-201ENST00000261302 CDC6Q99741 560 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 ARHGDIGQ99819 225 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 PDCD1LG2Q9BQ51 273 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 SPACA1Q9HBV2 294 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 DMRT3Q9NQL9 472 aa11.49□□□□□ -0.57
FOXN3-201ENST00000261302 CPSF4LA6NMK7 179 aaKnown RBP11.48□□□□□ -0.57
FOXN3-201ENST00000261302 C9J4A7 227 aa11.48□□□□□ -0.57
FOXN3-201ENST00000261302 F5H5T6 163 aa11.48□□□□□ -0.57
FOXN3-201ENST00000261302 DCTN6O00399 190 aa11.48□□□□□ -0.57
FOXN3-201ENST00000261302 SAP18O00422 153 aaKnown RBP11.48□□□□□ -0.57
FOXN3-201ENST00000261302 PHOX2AO14813 284 aa11.48□□□□□ -0.57
FOXN3-201ENST00000261302 IL2RAP01589 272 aa11.48□□□□□ -0.57
FOXN3-201ENST00000261302 OR1G1P47890 313 aa11.48□□□□□ -0.57
FOXN3-201ENST00000261302 SLC16A1P53985 500 aa11.48□□□□□ -0.57
FOXN3-201ENST00000261302 ACTA2P62736 377 aa11.48□□□□□ -0.57
FOXN3-201ENST00000261302 ACTG2P63267 376 aa11.48□□□□□ -0.57
FOXN3-201ENST00000261302 GABREP78334 506 aa11.48□□□□□ -0.57
FOXN3-201ENST00000261302 LTBQ06643 244 aa11.48□□□□□ -0.57
FOXN3-201ENST00000261302 SLBPQ14493 270 aaKnown RBP eCLIP11.48□□□□□ -0.57
FOXN3-201ENST00000261302 SLC10A1Q14973 349 aa11.48□□□□□ -0.57
FOXN3-201ENST00000261302 PLEKHS1Q5SXH7 462 aa11.48□□□□□ -0.57
FOXN3-201ENST00000261302 ZNF585AQ6P3V2 769 aa11.48□□□□□ -0.57
FOXN3-201ENST00000261302 ANKRD16Q6P6B7 361 aa11.48□□□□□ -0.57
FOXN3-201ENST00000261302 POMZP3Q6PJE2 187 aa11.48□□□□□ -0.57
FOXN3-201ENST00000261302 AGTRAPQ6RW13 159 aa11.48□□□□□ -0.57
FOXN3-201ENST00000261302 SLCO4C1Q6ZQN7 724 aa11.48□□□□□ -0.57
FOXN3-201ENST00000261302 LYG2Q86SG7 212 aa11.48□□□□□ -0.57
FOXN3-201ENST00000261302 BIVMQ86UB2 503 aa11.48□□□□□ -0.57
FOXN3-201ENST00000261302 CBARPQ8N350 705 aaPredicted RBP11.48□□□□□ -0.57
FOXN3-201ENST00000261302 ACOT4Q8N9L9 421 aa11.48□□□□□ -0.57
FOXN3-201ENST00000261302 ZSCAN4Q8NAM6 433 aaPredicted RBP11.48□□□□□ -0.57
FOXN3-201ENST00000261302 HSD17B11Q8NBQ5 300 aa11.48□□□□□ -0.57
FOXN3-201ENST00000261302 SUN3Q8TAQ9 357 aa11.48□□□□□ -0.57
FOXN3-201ENST00000261302 MITD1Q8WV92 249 aa11.48□□□□□ -0.57
FOXN3-201ENST00000261302 HPSE2Q8WWQ2 592 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms