RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 M0R082 166 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 TCRBP04435 133 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 CD14P08571 375 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 MYF5P13349 255 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 HOXD12P35452 270 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 THBS3P49746 956 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 P2RX1P51575 399 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 ELLP55199 621 aaPredicted RBP11.09□□□□□ -0.63
COL8A1-201ENST00000261037 KIAA1024LP59773 190 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 RPL27P61353 136 aaKnown RBP11.09□□□□□ -0.63
COL8A1-201ENST00000261037 SLC22A25Q6T423 547 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 FUNDC1Q8IVP5 155 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 UBQLN3Q9H347 655 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 TMEM38AQ9H6F2 299 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 KCND3Q9UK17 655 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.09□□□□□ -0.63
COL8A1-201ENST00000261037 HMGN4O00479 90 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 GRB2P62993 217 aaKnown RBP11.09□□□□□ -0.63
COL8A1-201ENST00000261037 TLE4Q04727 773 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 SAXO2Q658L1 398 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 GDPD3Q7L5L3 318 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 WDR5BQ86VZ2 330 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 SEMA6DQ8NFY4 1073 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 ASB16Q96NS5 453 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 KCNJ15Q99712 375 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 PLK3Q9H4B4 646 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 A0A1B0GUL6 1792 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 ZNF732B4DXR9 585 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 HMGA1P17096 107 aaKnown RBP11.09□□□□□ -0.63
COL8A1-201ENST00000261037 RAB5CP51148 216 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 BTG2P78543 158 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 ZMAT1Q5H9K5 638 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 CD300LGQ6UXG3 332 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 OR51E1Q8TCB6 317 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 HPSE2Q8WWQ2 592 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 SEMA4CQ9C0C4 833 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 OSGIN2Q9Y236 505 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 SPINT2O43291 252 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 ICOSLGO75144 302 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 CNIH1O95406 144 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 TRHRP34981 398 aaPredicted RBP11.09□□□□□ -0.63
COL8A1-201ENST00000261037 GSK3AP49840 483 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 KDM4DQ6B0I6 523 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 HSD17B11Q8NBQ5 300 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 OR51H1Q8NH63 302 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 EPHX3Q9H6B9 360 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 FAM212BQ9NTI7 297 aaPredicted RBP11.09□□□□□ -0.63
COL8A1-201ENST00000261037 SAGE1Q9NXZ1 904 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 OR51B4Q9Y5P0 310 aa11.09□□□□□ -0.63
COL8A1-201ENST00000261037 A0A096LPE4 126 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 A0A1W2PPZ6 126 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 POM121BA6NF01 834 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 H7C1Q1 480 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 SLC16A6O15403 523 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 SOD1P00441 154 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 CPT2P23786 658 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 ARNTP27540 789 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 HOXD11P31277 338 aaPredicted RBP11.08□□□□□ -0.64
COL8A1-201ENST00000261037 RFC3P40938 356 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 OR8G1Q15617 311 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 IAH1Q2TAA2 248 aaPredicted RBP11.08□□□□□ -0.64
COL8A1-201ENST00000261037 ZNF385BQ569K4 471 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 OR2B11Q5JQS5 317 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 ZDHHC5Q9C0B5 715 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 B3GAT1Q9P2W7 334 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 RAB22AQ9UL26 194 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 LRP5O75197 1615 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 A0A1W2PR48 441 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 STMND1H3BQB6 276 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 ACOT8O14734 319 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 SGCEO43556 437 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 HBG1P69891 147 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 HBG2P69892 147 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 ARL16Q0P5N6 197 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 ALKBH6Q3KRA9 238 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 MDGA2Q7Z553 956 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 NAA40Q86UY6 237 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 SVBPQ8N300 66 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 ZNF439Q8NDP4 499 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 GJC3Q8NFK1 279 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 STACQ99469 402 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 LYRM4Q9HD34 91 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 PPP1R3CQ9UQK1 317 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 FITM1A5D6W6 292 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 M0R1B8 84 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 YKT6O15498 198 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 CT45A6P0DMU7 189 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 CT45A5P0DMU8 189 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 CT45A7P0DMV0 189 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 CT45A8P0DMV1 189 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 CT45A9P0DMV2 189 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 CT45A2Q5DJT8 189 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 CT45A1Q5HYN5 189 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 ASTLQ6HA08 431 aaPredicted RBP11.08□□□□□ -0.64
COL8A1-201ENST00000261037 SSX9Q7RTT3 188 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 CT45A3Q8NHU0 189 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 KCTD12Q96CX2 325 aaKnown RBP11.08□□□□□ -0.64
COL8A1-201ENST00000261037 RNF170Q96K19 258 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 NPFFR2Q9Y5X5 522 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 TCRBV5S1A1TA0A578 114 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms