RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 BEND4Q6ZU67 534 aa13.9□□□□□ -0.18
CCDC90B-201ENST00000260054 ABHD12BQ7Z5M8 362 aaPredicted RBP13.9□□□□□ -0.18
CCDC90B-201ENST00000260054 KISS1RQ969F8 398 aaPredicted RBP13.9□□□□□ -0.18
CCDC90B-201ENST00000260054 H2AFY2Q9P0M6 372 aaPredicted RBP13.9□□□□□ -0.18
CCDC90B-201ENST00000260054 A0A1W2PPL8 197 aa13.89□□□□□ -0.19
CCDC90B-201ENST00000260054 ZNF99A8MXY4 864 aaPredicted RBP13.89□□□□□ -0.19
CCDC90B-201ENST00000260054 ZG16O60844 167 aa13.89□□□□□ -0.19
CCDC90B-201ENST00000260054 GLCEO94923 617 aa13.89□□□□□ -0.19
CCDC90B-201ENST00000260054 MPZL1O95297 269 aa13.89□□□□□ -0.19
CCDC90B-201ENST00000260054 MPGP29372 298 aa13.89□□□□□ -0.19
CCDC90B-201ENST00000260054 FMO3P31513 532 aa13.89□□□□□ -0.19
CCDC90B-201ENST00000260054 CENPAP49450 140 aa13.89□□□□□ -0.19
CCDC90B-201ENST00000260054 NUDT6P53370 316 aa13.89□□□□□ -0.19
CCDC90B-201ENST00000260054 CDH11P55287 796 aa13.89□□□□□ -0.19
CCDC90B-201ENST00000260054 RPS7P62081 194 aaKnown RBP13.89□□□□□ -0.19
CCDC90B-201ENST00000260054 C11orf91Q3C1V1 193 aa13.89□□□□□ -0.19
CCDC90B-201ENST00000260054 FOXL2NBQ6ZUU3 175 aa13.89□□□□□ -0.19
CCDC90B-201ENST00000260054 MEPCEQ7L2J0 689 aaKnown RBP13.89□□□□□ -0.19
CCDC90B-201ENST00000260054 GID4Q8IVV7 300 aa13.89□□□□□ -0.19
CCDC90B-201ENST00000260054 OR6K6Q8NGW6 343 aa13.89□□□□□ -0.19
CCDC90B-201ENST00000260054 ASB5Q8WWX0 329 aa13.89□□□□□ -0.19
CCDC90B-201ENST00000260054 ZMYND19Q96E35 227 aaPredicted RBP13.89□□□□□ -0.19
CCDC90B-201ENST00000260054 TEAD3Q99594 435 aa13.89□□□□□ -0.19
CCDC90B-201ENST00000260054 FOXB1Q99853 325 aa13.89□□□□□ -0.19
CCDC90B-201ENST00000260054 CLN6Q9NWW5 311 aa13.89□□□□□ -0.19
CCDC90B-201ENST00000260054 TAS2R16Q9NYV7 291 aa13.89□□□□□ -0.19
CCDC90B-201ENST00000260054 UBAP1Q9NZ09 502 aa13.89□□□□□ -0.19
CCDC90B-201ENST00000260054 MOKQ9UQ07 419 aa13.89□□□□□ -0.19
CCDC90B-201ENST00000260054 SCG5P05408 212 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 GAAP10253 952 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 COX5AP20674 150 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 LAP3P28838 519 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 HTR1FP30939 366 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 ZNF84P51523 738 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 ARF1P84077 181 aaKnown RBP13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 GLO1Q04760 184 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 STK11Q15831 433 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 SLC35D3Q5M8T2 416 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 GLB1L2Q8IW92 636 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 ZNF511Q8NB15 262 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 LILRB4Q8NHJ6 448 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 NABP1Q96AH0 204 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 SEC61A2Q9H9S3 476 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 SLC24A3Q9HC58 644 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 AMBNQ9NP70 447 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 TMEM38BQ9NVV0 291 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 TVP23AA6NH52 213 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 FAM90A27PA6NNH2 459 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 LYZL6O75951 148 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 TFP02787 698 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 B4GALT1P15291 398 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 GSTT1P30711 240 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 MRPS34P82930 218 aaKnown RBP13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 TEKQ02763 1124 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 HSF2Q03933 536 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 MED21Q13503 144 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 TSC22D1Q15714 1073 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 MEP1BQ16820 701 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 SLC25A35Q3KQZ1 300 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 KRT80Q6KB66 452 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 CXorf67Q86X51 503 aaPredicted RBP13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 ZNF433Q8N7K0 673 aaPredicted RBP13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 SLC26A10Q8NG04 563 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 RFKQ969G6 155 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 Q96MT0 163 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 NELFAQ9H3P2 528 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 POLE4Q9NR33 117 aa13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 MRPL22Q9NWU5 206 aaKnown RBP13.88□□□□□ -0.19
CCDC90B-201ENST00000260054 SLC22A31A6NKX4 558 aa13.87□□□□□ -0.19
CCDC90B-201ENST00000260054 HLA-DQA2P01906 255 aa13.87□□□□□ -0.19
CCDC90B-201ENST00000260054 PLA2G2AP14555 144 aa13.87□□□□□ -0.19
CCDC90B-201ENST00000260054 ZNF91Q05481 1191 aa13.87□□□□□ -0.19
CCDC90B-201ENST00000260054 P2RY6Q15077 328 aa13.87□□□□□ -0.19
CCDC90B-201ENST00000260054 C6orf141Q5SZD1 244 aa13.87□□□□□ -0.19
CCDC90B-201ENST00000260054 ZNF627Q7L945 461 aa13.87□□□□□ -0.19
CCDC90B-201ENST00000260054 OR1K1Q8NGR3 316 aa13.87□□□□□ -0.19
CCDC90B-201ENST00000260054 CA5BP1Q8WTZ4 195 aa13.87□□□□□ -0.19
CCDC90B-201ENST00000260054 ITLN2Q8WWU7 325 aaPredicted RBP13.87□□□□□ -0.19
CCDC90B-201ENST00000260054 C11orf40Q8WZ69 217 aa13.87□□□□□ -0.19
CCDC90B-201ENST00000260054 SH3GL3Q99963 347 aa13.87□□□□□ -0.19
CCDC90B-201ENST00000260054 WDR76Q9H967 626 aa13.87□□□□□ -0.19
CCDC90B-201ENST00000260054 WARS2Q9UGM6 360 aaKnown RBP13.87□□□□□ -0.19
CCDC90B-201ENST00000260054 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.87□□□□□ -0.19
CCDC90B-201ENST00000260054 COMMD3-BMI1R4GMX3 469 aa13.87□□□□□ -0.19
CCDC90B-201ENST00000260054 A0A096LPE4 126 aa13.86□□□□□ -0.19
CCDC90B-201ENST00000260054 A0A1W2PPZ6 126 aa13.86□□□□□ -0.19
CCDC90B-201ENST00000260054 SH3D21A4FU49 640 aa13.86□□□□□ -0.19
CCDC90B-201ENST00000260054 NKX2-6A6NCS4 301 aa13.86□□□□□ -0.19
CCDC90B-201ENST00000260054 RAD51DO75771 328 aa13.86□□□□□ -0.19
CCDC90B-201ENST00000260054 DBTP11182 482 aaKnown RBP13.86□□□□□ -0.19
CCDC90B-201ENST00000260054 SH3BGRP55822 239 aaPredicted RBP13.86□□□□□ -0.19
CCDC90B-201ENST00000260054 FAM27E3Q08E93 113 aa13.86□□□□□ -0.19
CCDC90B-201ENST00000260054 SGCAQ16586 387 aa13.86□□□□□ -0.19
CCDC90B-201ENST00000260054 SFRP5Q5T4F7 317 aa13.86□□□□□ -0.19
CCDC90B-201ENST00000260054 KLHL24Q6TFL4 600 aa13.86□□□□□ -0.19
CCDC90B-201ENST00000260054 UGT2A3Q6UWM9 527 aa13.86□□□□□ -0.19
CCDC90B-201ENST00000260054 STAC2Q6ZMT1 411 aa13.86□□□□□ -0.19
CCDC90B-201ENST00000260054 ZNF813Q6ZN06 617 aa13.86□□□□□ -0.19
CCDC90B-201ENST00000260054 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.86□□□□□ -0.19
CCDC90B-201ENST00000260054 SLC22A24Q8N4F4 322 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms