RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 RUNX3Q13761 415 aa13.58□□□□□ -0.24
KCTD3-201ENST00000259154 GUCA2BQ16661 112 aa13.58□□□□□ -0.24
KCTD3-201ENST00000259154 CORO6Q6QEF8 472 aa13.58□□□□□ -0.24
KCTD3-201ENST00000259154 RASGRP3Q8IV61 690 aa13.58□□□□□ -0.24
KCTD3-201ENST00000259154 ZNF775Q96BV0 537 aaPredicted RBP13.58□□□□□ -0.24
KCTD3-201ENST00000259154 RAB11FIP5Q9BXF6 653 aa13.58□□□□□ -0.24
KCTD3-201ENST00000259154 PRTFDC1Q9NRG1 225 aa13.58□□□□□ -0.24
KCTD3-201ENST00000259154 SYT7O43581 403 aa13.58□□□□□ -0.24
KCTD3-201ENST00000259154 ZNF354AO60765 605 aaPredicted RBP13.58□□□□□ -0.24
KCTD3-201ENST00000259154 SERPINF1P36955 418 aa13.58□□□□□ -0.24
KCTD3-201ENST00000259154 EMP2P54851 167 aa13.58□□□□□ -0.24
KCTD3-201ENST00000259154 FABP9Q0Z7S8 132 aa13.58□□□□□ -0.24
KCTD3-201ENST00000259154 KIAA0141Q14154 515 aaPredicted RBP13.58□□□□□ -0.24
KCTD3-201ENST00000259154 NCMAPQ5T1S8 102 aa13.58□□□□□ -0.24
KCTD3-201ENST00000259154 AADACL4Q5VUY2 407 aa13.58□□□□□ -0.24
KCTD3-201ENST00000259154 ZNF793Q6ZN11 406 aa13.58□□□□□ -0.24
KCTD3-201ENST00000259154 CPEB2Q7Z5Q1 589 aaKnown RBP13.58□□□□□ -0.24
KCTD3-201ENST00000259154 CRIPAKQ8N1N5 446 aa13.58□□□□□ -0.24
KCTD3-201ENST00000259154 OR1M1Q8NGA1 313 aa13.58□□□□□ -0.24
KCTD3-201ENST00000259154 OR4D10Q8NGI6 311 aa13.58□□□□□ -0.24
KCTD3-201ENST00000259154 RNF141Q8WVD5 230 aa13.58□□□□□ -0.24
KCTD3-201ENST00000259154 ARRDC3Q96B67 414 aa13.58□□□□□ -0.24
KCTD3-201ENST00000259154 SMIM19Q96E16 107 aa13.58□□□□□ -0.24
KCTD3-201ENST00000259154 CPEB1Q9BZB8 566 aaKnown RBP13.58□□□□□ -0.24
KCTD3-201ENST00000259154 PRO1933Q9H354 126 aa13.58□□□□□ -0.24
KCTD3-201ENST00000259154 PIGMQ9H3S5 423 aa13.58□□□□□ -0.24
KCTD3-201ENST00000259154 TMEM269A0A1B0GVZ9 245 aa13.57□□□□□ -0.24
KCTD3-201ENST00000259154 SPP1P10451 314 aa13.57□□□□□ -0.24
KCTD3-201ENST00000259154 NKX6-1P78426 367 aaPredicted RBP13.57□□□□□ -0.24
KCTD3-201ENST00000259154 ZNF776Q68DI1 518 aaPredicted RBP13.57□□□□□ -0.24
KCTD3-201ENST00000259154 FBXO46Q6PJ61 603 aaPredicted RBP13.57□□□□□ -0.24
KCTD3-201ENST00000259154 STAC2Q6ZMT1 411 aa13.57□□□□□ -0.24
KCTD3-201ENST00000259154 GPR137Q96N19 417 aa13.57□□□□□ -0.24
KCTD3-201ENST00000259154 GAREM1Q9H706 876 aa13.57□□□□□ -0.24
KCTD3-201ENST00000259154 SPACA1Q9HBV2 294 aa13.57□□□□□ -0.24
KCTD3-201ENST00000259154 MED17Q9NVC6 651 aa13.57□□□□□ -0.24
KCTD3-201ENST00000259154 TMEM14AQ9Y6G1 99 aa13.57□□□□□ -0.24
KCTD3-201ENST00000259154 H7C417 338 aa13.57□□□□□ -0.24
KCTD3-201ENST00000259154 NSA2O95478 260 aaKnown RBP13.57□□□□□ -0.24
KCTD3-201ENST00000259154 SULT1A3P0DMM9 295 aa13.57□□□□□ -0.24
KCTD3-201ENST00000259154 SULT1A4P0DMN0 295 aa13.57□□□□□ -0.24
KCTD3-201ENST00000259154 GP1BBP13224 206 aa13.57□□□□□ -0.24
KCTD3-201ENST00000259154 GABRA1P14867 456 aa13.57□□□□□ -0.24
KCTD3-201ENST00000259154 ALDH3B1P43353 468 aa13.57□□□□□ -0.24
KCTD3-201ENST00000259154 RAB13P51153 203 aa13.57□□□□□ -0.24
KCTD3-201ENST00000259154 DOC2BQ14184 412 aa13.57□□□□□ -0.24
KCTD3-201ENST00000259154 HNRNPA1L2Q32P51 320 aaKnown RBP13.57□□□□□ -0.24
KCTD3-201ENST00000259154 GABRG1Q8N1C3 465 aa13.57□□□□□ -0.24
KCTD3-201ENST00000259154 SLC22A18Q96BI1 424 aa13.57□□□□□ -0.24
KCTD3-201ENST00000259154 MDC1Q14676 2089 aaKnown RBP13.57□□□□□ -0.24
KCTD3-201ENST00000259154 P2RY10O00398 339 aa13.57□□□□□ -0.24
KCTD3-201ENST00000259154 SDHAP31040 664 aa13.57□□□□□ -0.24
KCTD3-201ENST00000259154 MEOX2P50222 304 aa13.57□□□□□ -0.24
KCTD3-201ENST00000259154 ASCL1P50553 236 aa13.57□□□□□ -0.24
KCTD3-201ENST00000259154 ALKBH1Q13686 389 aaKnown RBP13.57□□□□□ -0.24
KCTD3-201ENST00000259154 HACD4Q5VWC8 232 aa13.57□□□□□ -0.24
KCTD3-201ENST00000259154 SLC48A1Q6P1K1 146 aa13.57□□□□□ -0.24
KCTD3-201ENST00000259154 OR4N2Q8NGD1 307 aa13.57□□□□□ -0.24
KCTD3-201ENST00000259154 CDC6Q99741 560 aa13.57□□□□□ -0.24
KCTD3-201ENST00000259154 JAM3Q9BX67 310 aa13.57□□□□□ -0.24
KCTD3-201ENST00000259154 ESPL1Q14674 2120 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 SPTBN2O15020 2390 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 ARG1P05089 322 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 HTR2CP28335 458 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 GNRHRP30968 328 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 C2orf76Q3KRA6 126 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 SLC18B1Q6NT16 456 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 SUCNR1Q9BXA5 334 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 PCDHGA5Q9Y5G8 931 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 HEBP2Q9Y5Z4 205 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 BORCS7-ASMTA0A0B4J1R7 106 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 CCDC85CA6NKD9 419 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 SLC34A2O95436 690 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 ZNF44P15621 663 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 GABRR1P24046 479 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 IDH3GP51553 393 aaPredicted RBP13.56□□□□□ -0.24
KCTD3-201ENST00000259154 CST6Q15828 149 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 SLC36A2Q495M3 483 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 FAM209BQ5JX69 171 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 PATE1Q8WXA2 126 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 PELI2Q9HAT8 420 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 IL20Q9NYY1 176 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 EHFQ9NZC4 300 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 TBX21Q9UL17 535 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 DOCK9Q9BZ29 2069 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 PTPRZ1P23471 2315 aaPredicted RBP13.56□□□□□ -0.24
KCTD3-201ENST00000259154 CENPVL1A0A0U1RR11 272 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 GPRIN2O60269 458 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 AFF3P51826 1226 aaKnown RBP13.56□□□□□ -0.24
KCTD3-201ENST00000259154 SSX2Q16385 188 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 TMEM215Q68D42 235 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 OR10AC1Q8NH08 325 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 OR5V1Q9UGF6 321 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 COL4A6Q14031 1691 aa13.56□□□□□ -0.24
KCTD3-201ENST00000259154 TMEM150CB9EJG8 249 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 F5H5K5 113 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 MRPS10P82664 201 aaKnown RBP13.55□□□□□ -0.24
KCTD3-201ENST00000259154 ZNF765Q7L2R6 523 aa13.55□□□□□ -0.24
KCTD3-201ENST00000259154 ABHD12BQ7Z5M8 362 aaPredicted RBP13.55□□□□□ -0.24
KCTD3-201ENST00000259154 FAM24BQ8N5W8 94 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms