RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 FAM166BA8MTA8 275 aa15.52■□□□□ 0.07
SRSF1-201ENST00000258962 PRR32B1ATL7 298 aa15.52■□□□□ 0.07
SRSF1-201ENST00000258962 E9PI62 339 aa15.52■□□□□ 0.07
SRSF1-201ENST00000258962 MAGEB4O15481 346 aaPredicted RBP15.52■□□□□ 0.07
SRSF1-201ENST00000258962 MT-ND5P03915 603 aa15.52■□□□□ 0.07
SRSF1-201ENST00000258962 PSKH1P11801 424 aa15.52■□□□□ 0.07
SRSF1-201ENST00000258962 STARP49675 285 aa15.52■□□□□ 0.07
SRSF1-201ENST00000258962 OR12D2P58182 307 aa15.52■□□□□ 0.07
SRSF1-201ENST00000258962 CSNK2A1P68400 391 aaPredicted RBP15.52■□□□□ 0.07
SRSF1-201ENST00000258962 BDH1Q02338 343 aa15.52■□□□□ 0.07
SRSF1-201ENST00000258962 FMODQ06828 376 aa15.52■□□□□ 0.07
SRSF1-201ENST00000258962 MOGQ16653 247 aa15.52■□□□□ 0.07
SRSF1-201ENST00000258962 CDONQ4KMG0 1287 aa15.52■□□□□ 0.07
SRSF1-201ENST00000258962 VASH1Q7L8A9 365 aaPredicted RBP15.52■□□□□ 0.07
SRSF1-201ENST00000258962 GPAT4Q86UL3 456 aa15.52■□□□□ 0.07
SRSF1-201ENST00000258962 CDC20BQ86Y33 519 aa15.52■□□□□ 0.07
SRSF1-201ENST00000258962 TMEM251Q8N6I4 163 aa15.52■□□□□ 0.07
SRSF1-201ENST00000258962 SYT14Q8NB59 555 aa15.52■□□□□ 0.07
SRSF1-201ENST00000258962 DTNBP1Q96EV8 351 aa15.52■□□□□ 0.07
SRSF1-201ENST00000258962 ADGRG7Q96K78 797 aa15.52■□□□□ 0.07
SRSF1-201ENST00000258962 UCN2Q96RP3 112 aa15.52■□□□□ 0.07
SRSF1-201ENST00000258962 WDR76Q9H967 626 aa15.52■□□□□ 0.07
SRSF1-201ENST00000258962 STUB1Q9UNE7 303 aa15.52■□□□□ 0.07
SRSF1-201ENST00000258962 RASD1Q9Y272 281 aa15.52■□□□□ 0.07
SRSF1-201ENST00000258962 J3QLW9 94 aa15.51■□□□□ 0.07
SRSF1-201ENST00000258962 EIF1AYO14602 144 aaKnown RBP15.51■□□□□ 0.07
SRSF1-201ENST00000258962 EIF1BO60739 113 aaKnown RBP15.51■□□□□ 0.07
SRSF1-201ENST00000258962 WISP2O76076 250 aa15.51■□□□□ 0.07
SRSF1-201ENST00000258962 AGFG2O95081 481 aa15.51■□□□□ 0.07
SRSF1-201ENST00000258962 ZNF19P17023 458 aa15.51■□□□□ 0.07
SRSF1-201ENST00000258962 MAGEA5P43359 124 aa15.51■□□□□ 0.07
SRSF1-201ENST00000258962 AGFG1P52594 562 aaKnown RBP15.51■□□□□ 0.07
SRSF1-201ENST00000258962 SUCLG1P53597 346 aaKnown RBP15.51■□□□□ 0.07
SRSF1-201ENST00000258962 CASP6P55212 293 aa15.51■□□□□ 0.07
SRSF1-201ENST00000258962 CLDN15P56746 228 aa15.51■□□□□ 0.07
SRSF1-201ENST00000258962 HYAL4Q2M3T9 481 aa15.51■□□□□ 0.07
SRSF1-201ENST00000258962 TP53I3Q53FA7 332 aa15.51■□□□□ 0.07
SRSF1-201ENST00000258962 SYS1Q8N2H4 156 aa15.51■□□□□ 0.07
SRSF1-201ENST00000258962 FOXN4Q96NZ1 517 aa15.51■□□□□ 0.07
SRSF1-201ENST00000258962 MRPL13Q9BYD1 178 aaKnown RBP15.51■□□□□ 0.07
SRSF1-201ENST00000258962 SIAEQ9HAT2 523 aa15.51■□□□□ 0.07
SRSF1-201ENST00000258962 IGKV1D-43A0A0B4J1Z2 117 aa15.5■□□□□ 0.07
SRSF1-201ENST00000258962 SMAD9O15198 467 aaKnown RBP15.5■□□□□ 0.07
SRSF1-201ENST00000258962 DNPH1O43598 174 aa15.5■□□□□ 0.07
SRSF1-201ENST00000258962 CELP19835 753 aa15.5■□□□□ 0.07
SRSF1-201ENST00000258962 POU3F2P20265 443 aaPredicted RBP15.5■□□□□ 0.07
SRSF1-201ENST00000258962 CRABP1P29762 137 aa15.5■□□□□ 0.07
SRSF1-201ENST00000258962 GABRA5P31644 462 aa15.5■□□□□ 0.07
SRSF1-201ENST00000258962 PTGS2P35354 604 aa15.5■□□□□ 0.07
SRSF1-201ENST00000258962 ACTA2P62736 377 aa15.5■□□□□ 0.07
SRSF1-201ENST00000258962 ACTG2P63267 376 aa15.5■□□□□ 0.07
SRSF1-201ENST00000258962 HSF2Q03933 536 aa15.5■□□□□ 0.07
SRSF1-201ENST00000258962 DCTN2Q13561 401 aaKnown RBP15.5■□□□□ 0.07
SRSF1-201ENST00000258962 OTPQ5XKR4 325 aa15.5■□□□□ 0.07
SRSF1-201ENST00000258962 ESPNLQ6ZVH7 1005 aa15.5■□□□□ 0.07
SRSF1-201ENST00000258962 CROCCP3Q8IVE0 287 aa15.5■□□□□ 0.07
SRSF1-201ENST00000258962 TMEM203Q969S6 136 aa15.5■□□□□ 0.07
SRSF1-201ENST00000258962 MRPL48Q96GC5 212 aaKnown RBP15.5■□□□□ 0.07
SRSF1-201ENST00000258962 INTS14Q96SY0 518 aa15.5■□□□□ 0.07
SRSF1-201ENST00000258962 NAA11Q9BSU3 229 aaPredicted RBP15.5■□□□□ 0.07
SRSF1-201ENST00000258962 DEFB127Q9H1M4 99 aa15.5■□□□□ 0.07
SRSF1-201ENST00000258962 DCSTAMPQ9H295 470 aa15.5■□□□□ 0.07
SRSF1-201ENST00000258962 PLGRKTQ9HBL7 147 aa15.5■□□□□ 0.07
SRSF1-201ENST00000258962 TRIM36Q9NQ86 728 aa15.5■□□□□ 0.07
SRSF1-201ENST00000258962 MRPL22Q9NWU5 206 aaKnown RBP15.5■□□□□ 0.07
SRSF1-201ENST00000258962 ZNF670-ZNF695F2Z2N8 137 aa15.49■□□□□ 0.07
SRSF1-201ENST00000258962 UBR5O95071 2799 aaPredicted RBP15.49■□□□□ 0.07
SRSF1-201ENST00000258962 PGA4P0DJD7 388 aa15.49■□□□□ 0.07
SRSF1-201ENST00000258962 PGA3P0DJD8 388 aa15.49■□□□□ 0.07
SRSF1-201ENST00000258962 ZNF43P17038 809 aa15.49■□□□□ 0.07
SRSF1-201ENST00000258962 ENPP1P22413 925 aa15.49■□□□□ 0.07
SRSF1-201ENST00000258962 RPS27P42677 84 aaKnown RBP15.49■□□□□ 0.07
SRSF1-201ENST00000258962 RAC3P60763 192 aa15.49■□□□□ 0.07
SRSF1-201ENST00000258962 SLC10A1Q14973 349 aa15.49■□□□□ 0.07
SRSF1-201ENST00000258962 POU4F3Q15319 338 aa15.49■□□□□ 0.07
SRSF1-201ENST00000258962 ZNF684Q5T5D7 378 aa15.49■□□□□ 0.07
SRSF1-201ENST00000258962 HBMQ6B0K9 141 aa15.49■□□□□ 0.07
SRSF1-201ENST00000258962 CD200R1LQ6Q8B3 271 aa15.49■□□□□ 0.07
SRSF1-201ENST00000258962 TRILQ7L0X0 811 aa15.49■□□□□ 0.07
SRSF1-201ENST00000258962 UBQLNLQ8IYU4 475 aa15.49■□□□□ 0.07
SRSF1-201ENST00000258962 FAM109AQ8N4B1 249 aa15.49■□□□□ 0.07
SRSF1-201ENST00000258962 NOXO1Q8NFA2 376 aa15.49■□□□□ 0.07
SRSF1-201ENST00000258962 OR6N2Q8NGY6 317 aa15.49■□□□□ 0.07
SRSF1-201ENST00000258962 OR6X1Q8NH79 312 aa15.49■□□□□ 0.07
SRSF1-201ENST00000258962 SLC6A15Q9H2J7 730 aa15.49■□□□□ 0.07
SRSF1-201ENST00000258962 EXOSC4Q9NPD3 245 aaKnown RBP15.49■□□□□ 0.07
SRSF1-201ENST00000258962 SSR3Q9UNL2 185 aa15.49■□□□□ 0.07
SRSF1-201ENST00000258962 COA3Q9Y2R0 106 aaPredicted RBP15.49■□□□□ 0.07
SRSF1-201ENST00000258962 GRIP1Q9Y3R0 1128 aa15.49■□□□□ 0.07
SRSF1-201ENST00000258962 A3GALT2U3KPV4 340 aa15.49■□□□□ 0.07
SRSF1-201ENST00000258962 TRGV8A0A0C4DH27 118 aa15.48■□□□□ 0.07
SRSF1-201ENST00000258962 SLC35F4A4IF30 521 aa15.48■□□□□ 0.07
SRSF1-201ENST00000258962 LINC01387J3KSC0 135 aa15.48■□□□□ 0.07
SRSF1-201ENST00000258962 CXCL13O43927 109 aa15.48■□□□□ 0.07
SRSF1-201ENST00000258962 SLC19A2O60779 497 aa15.48■□□□□ 0.07
SRSF1-201ENST00000258962 ABOP16442 354 aa15.48■□□□□ 0.07
SRSF1-201ENST00000258962 SOX6P35712 828 aa15.48■□□□□ 0.07
SRSF1-201ENST00000258962 CENPAP49450 140 aa15.48■□□□□ 0.07
SRSF1-201ENST00000258962 BLVRAP53004 296 aa15.48■□□□□ 0.07
SRSF1-201ENST00000258962 CREB3L2Q70SY1 520 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms