RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 FAM208BQ5VWN6 2430 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 PIN1P1O15428 100 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 ZFAND5O76080 213 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 ENDOUP21128 410 aaKnown RBP8.17□□□□□ -1.1
CKAP2-201ENST00000258607 ANOS1P23352 680 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 UGT2B10P36537 528 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 P2RX1P51575 399 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 ZMYND11Q15326 602 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 ZNF181Q2M3W8 571 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 GLYATL3Q5SZD4 288 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 ATAD3CQ5T2N8 411 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 ZCCHC12Q6PEW1 402 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 RAB11FIP2Q7L804 512 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 ZNF283Q8N7M2 679 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 ZSCAN1Q8NBB4 408 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 OR13C3Q8NGS6 347 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 FGGYQ96C11 551 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 SPSB2Q99619 263 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 SEC22CQ9BRL7 303 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 ABHD6Q9BV23 337 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 SDHAF3Q9NRP4 125 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 MED17Q9NVC6 651 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 EML5Q05BV3 1969 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 A0A1W2PP11 408 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 FRG2CA6NGY1 282 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 HSPB6O14558 160 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 GLCEO94923 617 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 RPS4Y1P22090 263 aaKnown RBP8.17□□□□□ -1.1
CKAP2-201ENST00000258607 CLDN20P56880 219 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 SLC26A5P58743 744 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 FHL1Q13642 323 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.17□□□□□ -1.1
CKAP2-201ENST00000258607 RHBDD2Q6NTF9 364 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 TUBA3EQ6PEY2 450 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 CD300LDQ6UXZ3 194 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 C3P1Q6ZMU1 363 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 FOXRED2Q8IWF2 684 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 SCAIQ8N9R8 606 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 BOLLQ8N9W6 283 aaKnown RBP8.17□□□□□ -1.1
CKAP2-201ENST00000258607 LIN37Q96GY3 246 aaPredicted RBP8.17□□□□□ -1.1
CKAP2-201ENST00000258607 SLC41A2Q96JW4 573 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 TMEM246Q9BRR3 403 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 SLITRK2Q9H156 845 aa8.17□□□□□ -1.1
CKAP2-201ENST00000258607 MN1Q10571 1320 aaPredicted RBP8.16□□□□□ -1.1
CKAP2-201ENST00000258607 SPAARA0A1B0GVQ0 90 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 C5orf63A6NC05 138 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 GMDSO60547 372 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 OR2T7P0C7T2 308 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 PI3P19957 117 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 SNTB2Q13425 540 aaKnown RBP8.16□□□□□ -1.1
CKAP2-201ENST00000258607 GPR176Q14439 515 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 FAM57BQ71RH2 274 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 TRILQ7L0X0 811 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 ARIH2OSQ8N7S6 290 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 OR4S1Q8NGB4 309 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 OR2T27Q8NH04 317 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 OR2AE1Q8NHA4 323 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 CHAC2Q8WUX2 184 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 DNASE2BQ8WZ79 361 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 GINS4Q9BRT9 223 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 PILRBQ9UKJ0 227 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 MYO18BQ8IUG5 2567 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 TRAV36DV7A0A075B6V5 113 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 FAM221AA4D161 298 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 D6RAR5 112 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 LDOC1O95751 146 aaPredicted RBP8.16□□□□□ -1.1
CKAP2-201ENST00000258607 ANXA7P20073 488 aaKnown RBP8.16□□□□□ -1.1
CKAP2-201ENST00000258607 DLSTP36957 453 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 PITPNBP48739 271 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 EVX1P49640 407 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 VEGFCP49767 419 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 PPP3R1P63098 170 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 HSF1Q00613 529 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 EFR3AQ14156 821 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 SLC22A6Q4U2R8 563 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 SLC22A10Q63ZE4 541 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 RPS19BP1Q86WX3 136 aaKnown RBP8.16□□□□□ -1.1
CKAP2-201ENST00000258607 OR52N1Q8NH53 320 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 OR51E1Q8TCB6 317 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 CASTOR1Q8WTX7 329 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 RGP1Q92546 391 aaPredicted RBP8.16□□□□□ -1.1
CKAP2-201ENST00000258607 WDR89Q96FK6 387 aaPredicted RBP8.16□□□□□ -1.1
CKAP2-201ENST00000258607 MS4A3Q96HJ5 214 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 RADILQ96JH8 1075 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 PGLYRP3Q96LB9 341 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 PLEKHA1Q9HB21 404 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 SRPK3Q9UPE1 567 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 CEP192Q8TEP8 1941 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 A0A0B4J293 547 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 IRGMA1A4Y4 181 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 PRSS37A4D1T9 235 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 A8MVM7 634 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 ARPC1BO15143 372 aaKnown RBP8.16□□□□□ -1.1
CKAP2-201ENST00000258607 EFNA2O43921 213 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 ARL6IP5O75915 188 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 ANKRD34CP0C6C1 535 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 RFPL3SP0C7P2 107 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 GDF1P27539 372 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 PTH2RP49190 550 aa8.16□□□□□ -1.1
CKAP2-201ENST00000258607 POLR2HP52434 150 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms