RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 HSF2Q03933 536 aa16.01■□□□□ 0.15
KLHDC3-201ENST00000244670 CAMK2DQ13557 499 aa16.01■□□□□ 0.15
KLHDC3-201ENST00000244670 MEP1BQ16820 701 aa16.01■□□□□ 0.15
KLHDC3-201ENST00000244670 CDC20BQ86Y33 519 aa16.01■□□□□ 0.15
KLHDC3-201ENST00000244670 MDS2Q8NDY4 140 aa16.01■□□□□ 0.15
KLHDC3-201ENST00000244670 ABHD4Q8TB40 342 aa16.01■□□□□ 0.15
KLHDC3-201ENST00000244670 SMIM19Q96E16 107 aa16.01■□□□□ 0.15
KLHDC3-201ENST00000244670 ADAD1Q96M93 576 aaKnown RBP16.01■□□□□ 0.15
KLHDC3-201ENST00000244670 WDFY2Q96P53 400 aa16.01■□□□□ 0.15
KLHDC3-201ENST00000244670 OXGR1Q96P68 337 aa16.01■□□□□ 0.15
KLHDC3-201ENST00000244670 SDHCQ99643 169 aaPredicted RBP16.01■□□□□ 0.15
KLHDC3-201ENST00000244670 SRXN1Q9BYN0 137 aa16.01■□□□□ 0.15
KLHDC3-201ENST00000244670 TTTY12Q9BZ98 90 aa16.01■□□□□ 0.15
KLHDC3-201ENST00000244670 OR2B2Q9GZK3 357 aa16.01■□□□□ 0.15
KLHDC3-201ENST00000244670 RNF32Q9H0A6 362 aa16.01■□□□□ 0.15
KLHDC3-201ENST00000244670 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.01■□□□□ 0.15
KLHDC3-201ENST00000244670 KCNN2Q9H2S1 579 aa16.01■□□□□ 0.15
KLHDC3-201ENST00000244670 CMAHPQ9Y471 501 aa16.01■□□□□ 0.15
KLHDC3-201ENST00000244670 V9GYH0 126 aa16.01■□□□□ 0.15
KLHDC3-201ENST00000244670 GJE1A6NN92 205 aa16■□□□□ 0.15
KLHDC3-201ENST00000244670 SP1P08047 785 aa16■□□□□ 0.15
KLHDC3-201ENST00000244670 CD97P48960 835 aa16■□□□□ 0.15
KLHDC3-201ENST00000244670 GDI2P50395 445 aaKnown RBP16■□□□□ 0.15
KLHDC3-201ENST00000244670 GBX2P52951 348 aaPredicted RBP16■□□□□ 0.15
KLHDC3-201ENST00000244670 CSNK2A1P68400 391 aaPredicted RBP16■□□□□ 0.15
KLHDC3-201ENST00000244670 SIRPAP78324 504 aa16■□□□□ 0.15
KLHDC3-201ENST00000244670 TRAM1Q15629 374 aa16■□□□□ 0.15
KLHDC3-201ENST00000244670 CARD17Q5XLA6 110 aa16■□□□□ 0.15
KLHDC3-201ENST00000244670 SLC25A25Q6KCM7 469 aa16■□□□□ 0.15
KLHDC3-201ENST00000244670 NR2C2APQ86WQ0 139 aa16■□□□□ 0.15
KLHDC3-201ENST00000244670 KCNE4Q8WWG9 221 aa16■□□□□ 0.15
KLHDC3-201ENST00000244670 RNF166Q96A37 237 aaPredicted RBP16■□□□□ 0.15
KLHDC3-201ENST00000244670 ABCB9Q9NP78 766 aa16■□□□□ 0.15
KLHDC3-201ENST00000244670 MRPL22Q9NWU5 206 aaKnown RBP16■□□□□ 0.15
KLHDC3-201ENST00000244670 LAMP5Q9UJQ1 280 aa16■□□□□ 0.15
KLHDC3-201ENST00000244670 MPZL1O95297 269 aa16■□□□□ 0.15
KLHDC3-201ENST00000244670 CRABP1P29762 137 aa16■□□□□ 0.15
KLHDC3-201ENST00000244670 MAGEA5P43359 124 aa16■□□□□ 0.15
KLHDC3-201ENST00000244670 MEOX1P50221 254 aa16■□□□□ 0.15
KLHDC3-201ENST00000244670 SUCLG1P53597 346 aaKnown RBP16■□□□□ 0.15
KLHDC3-201ENST00000244670 H3F3AP84243 136 aa16■□□□□ 0.15
KLHDC3-201ENST00000244670 PLGLB1Q02325 96 aa16■□□□□ 0.15
KLHDC3-201ENST00000244670 MFAP5Q13361 173 aa16■□□□□ 0.15
KLHDC3-201ENST00000244670 RSPO4Q2I0M5 234 aaPredicted RBP16■□□□□ 0.15
KLHDC3-201ENST00000244670 FAM205BPQ63HN1 556 aa16■□□□□ 0.15
KLHDC3-201ENST00000244670 GGNQ86UU5 652 aa16■□□□□ 0.15
KLHDC3-201ENST00000244670 NSMAFQ92636 917 aa16■□□□□ 0.15
KLHDC3-201ENST00000244670 HTRA1Q92743 480 aa16■□□□□ 0.15
KLHDC3-201ENST00000244670 NEURL2Q9BR09 285 aa16■□□□□ 0.15
KLHDC3-201ENST00000244670 CCDC32Q9BV29 185 aa16■□□□□ 0.15
KLHDC3-201ENST00000244670 B4GALT7Q9UBV7 327 aa16■□□□□ 0.15
KLHDC3-201ENST00000244670 KCNG2Q9UJ96 466 aa16■□□□□ 0.15
KLHDC3-201ENST00000244670 KLK13Q9UKR3 277 aa16■□□□□ 0.15
KLHDC3-201ENST00000244670 ZNF593O00488 134 aaPredicted RBP15.99■□□□□ 0.15
KLHDC3-201ENST00000244670 NME2P1O60361 137 aa15.99■□□□□ 0.15
KLHDC3-201ENST00000244670 OR8G3PP0DMU2 310 aa15.99■□□□□ 0.15
KLHDC3-201ENST00000244670 SPINK2P20155 84 aa15.99■□□□□ 0.15
KLHDC3-201ENST00000244670 POU3F2P20265 443 aaPredicted RBP15.99■□□□□ 0.15
KLHDC3-201ENST00000244670 NME2P22392 152 aa15.99■□□□□ 0.15
KLHDC3-201ENST00000244670 ENPP1P22413 925 aa15.99■□□□□ 0.15
KLHDC3-201ENST00000244670 SOX8P57073 446 aa15.99■□□□□ 0.15
KLHDC3-201ENST00000244670 DEFA1P59665 94 aa15.99■□□□□ 0.15
KLHDC3-201ENST00000244670 DEFA3P59666 94 aa15.99■□□□□ 0.15
KLHDC3-201ENST00000244670 CDC20Q12834 499 aa15.99■□□□□ 0.15
KLHDC3-201ENST00000244670 ZNF239Q16600 458 aaKnown RBP15.99■□□□□ 0.15
KLHDC3-201ENST00000244670 DEFB109BQ30KR1 87 aa15.99■□□□□ 0.15
KLHDC3-201ENST00000244670 RPL22L1Q6P5R6 122 aaKnown RBP15.99■□□□□ 0.15
KLHDC3-201ENST00000244670 LRRC69Q6ZNQ3 347 aa15.99■□□□□ 0.15
KLHDC3-201ENST00000244670 CEACAM19Q7Z692 300 aa15.99■□□□□ 0.15
KLHDC3-201ENST00000244670 THEM6Q8WUY1 208 aa15.99■□□□□ 0.15
KLHDC3-201ENST00000244670 CSAG2Q9Y5P2 127 aa15.99■□□□□ 0.15
KLHDC3-201ENST00000244670 LAMA5O15230 3695 aa15.99■□□□□ 0.15
KLHDC3-201ENST00000244670 GFRA3O60609 400 aa15.98■□□□□ 0.15
KLHDC3-201ENST00000244670 EIF1BO60739 113 aaKnown RBP15.98■□□□□ 0.15
KLHDC3-201ENST00000244670 PTTG1O95997 202 aa15.98■□□□□ 0.15
KLHDC3-201ENST00000244670 SPARCP09486 303 aa15.98■□□□□ 0.15
KLHDC3-201ENST00000244670 EDNRAP25101 427 aa15.98■□□□□ 0.15
KLHDC3-201ENST00000244670 MTNR1BP49286 362 aa15.98■□□□□ 0.15
KLHDC3-201ENST00000244670 GFRA1P56159 465 aa15.98■□□□□ 0.15
KLHDC3-201ENST00000244670 CLDN17P56750 224 aa15.98■□□□□ 0.15
KLHDC3-201ENST00000244670 CLRN1P58418 232 aa15.98■□□□□ 0.15
KLHDC3-201ENST00000244670 RPS11P62280 158 aaKnown RBP eCLIP15.98■□□□□ 0.15
KLHDC3-201ENST00000244670 ADAM8P78325 824 aa15.98■□□□□ 0.15
KLHDC3-201ENST00000244670 GLO1Q04760 184 aa15.98■□□□□ 0.15
KLHDC3-201ENST00000244670 HBMQ6B0K9 141 aa15.98■□□□□ 0.15
KLHDC3-201ENST00000244670 FDCSPQ8NFU4 85 aa15.98■□□□□ 0.15
KLHDC3-201ENST00000244670 RPS4Y2Q8TD47 263 aa15.98■□□□□ 0.15
KLHDC3-201ENST00000244670 MRPL48Q96GC5 212 aaKnown RBP15.98■□□□□ 0.15
KLHDC3-201ENST00000244670 AMELYQ99218 206 aa15.98■□□□□ 0.15
KLHDC3-201ENST00000244670 ATF6BQ99941 703 aa15.98■□□□□ 0.15
KLHDC3-201ENST00000244670 PDCD1LG2Q9BQ51 273 aa15.98■□□□□ 0.15
KLHDC3-201ENST00000244670 MRM2Q9UI43 246 aaKnown RBP15.98■□□□□ 0.15
KLHDC3-201ENST00000244670 RASD1Q9Y272 281 aa15.98■□□□□ 0.15
KLHDC3-201ENST00000244670 KLF13Q9Y2Y9 288 aaPredicted RBP15.98■□□□□ 0.15
KLHDC3-201ENST00000244670 MRPS18CQ9Y3D5 142 aaKnown RBP15.98■□□□□ 0.15
KLHDC3-201ENST00000244670 DCHS1Q96JQ0 3298 aa15.98■□□□□ 0.15
KLHDC3-201ENST00000244670 ZNF407Q9C0G0 2248 aa15.98■□□□□ 0.15
KLHDC3-201ENST00000244670 CFAP47Q6ZTR5 3102 aa15.98■□□□□ 0.15
KLHDC3-201ENST00000244670 TRBV2A0A0J9YWF9 115 aa15.98■□□□□ 0.15
KLHDC3-201ENST00000244670 RPP14O95059 124 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms