RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 SLC22A24Q8N4F4 322 aa9.85□□□□□ -0.83
SF3B6-201ENST00000233468 OR9Q2Q8NGE9 314 aa9.85□□□□□ -0.83
SF3B6-201ENST00000233468 HDAC2Q92769 488 aaKnown RBP9.85□□□□□ -0.83
SF3B6-201ENST00000233468 ERMAPQ96PL5 475 aaPredicted RBP9.85□□□□□ -0.83
SF3B6-201ENST00000233468 SLC38A2Q96QD8 506 aa9.85□□□□□ -0.83
SF3B6-201ENST00000233468 SNX18Q96RF0 628 aa9.85□□□□□ -0.83
SF3B6-201ENST00000233468 GPA33Q99795 319 aa9.85□□□□□ -0.83
SF3B6-201ENST00000233468 FOXC2Q99958 501 aa9.85□□□□□ -0.83
SF3B6-201ENST00000233468 TMEM204Q9BSN7 226 aa9.85□□□□□ -0.83
SF3B6-201ENST00000233468 WACQ9BTA9 647 aa9.85□□□□□ -0.83
SF3B6-201ENST00000233468 SIAEQ9HAT2 523 aa9.85□□□□□ -0.83
SF3B6-201ENST00000233468 FAIMQ9NVQ4 179 aa9.85□□□□□ -0.83
SF3B6-201ENST00000233468 TMEM38BQ9NVV0 291 aa9.85□□□□□ -0.83
SF3B6-201ENST00000233468 IL20Q9NYY1 176 aa9.85□□□□□ -0.83
SF3B6-201ENST00000233468 PDP1Q9P0J1 537 aaPredicted RBP9.85□□□□□ -0.83
SF3B6-201ENST00000233468 POU2F3Q9UKI9 436 aa9.85□□□□□ -0.83
SF3B6-201ENST00000233468 ADAM18Q9Y3Q7 739 aa9.85□□□□□ -0.83
SF3B6-201ENST00000233468 TEX13CA0A0J9YWL9 993 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 DPRXA6NFQ7 191 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 ABCD4O14678 606 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 TMCC2O75069 709 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 CRYAAP02489 173 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 CD79AP11912 226 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 ERFP50548 548 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 ACTR3P61158 418 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 PCBD1P61457 104 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 MRPS34P82930 218 aaKnown RBP9.84□□□□□ -0.83
SF3B6-201ENST00000233468 MYBPC1Q00872 1141 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 GABPB1Q06547 395 aaPredicted RBP9.84□□□□□ -0.83
SF3B6-201ENST00000233468 KEAP1Q14145 624 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 ATP6AP1Q15904 470 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 LCE2AQ5TA79 106 aaPredicted RBP9.84□□□□□ -0.83
SF3B6-201ENST00000233468 SHQ1Q6PI26 577 aaKnown RBP9.84□□□□□ -0.83
SF3B6-201ENST00000233468 SLC22A25Q6T423 547 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 SEZ6L2Q6UXD5 910 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 SLC16A14Q7RTX9 510 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 ATG16L2Q8NAA4 619 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 OR2T33Q8NG76 320 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 TEX47Q8TBZ9 253 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 NSMAFQ92636 917 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 PIGTQ969N2 578 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 GTPBP3Q969Y2 492 aaKnown RBP9.84□□□□□ -0.83
SF3B6-201ENST00000233468 SLCO4A1Q96BD0 722 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 ZNF837Q96EG3 531 aaPredicted RBP9.84□□□□□ -0.83
SF3B6-201ENST00000233468 SAMD8Q96LT4 415 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 Q96M85 177 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 FEVQ99581 238 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 C1QTNF6Q9BXI9 259 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 C1orf198Q9H425 327 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 PLEKHF2Q9H8W4 249 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 RNF121Q9H920 327 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 TBC1D23Q9NUY8 699 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 KIF17Q9P2E2 1029 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 CRNNQ9UBG3 495 aaPredicted RBP9.84□□□□□ -0.83
SF3B6-201ENST00000233468 IL20RAQ9UHF4 553 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 ENOPH1Q9UHY7 261 aa9.84□□□□□ -0.83
SF3B6-201ENST00000233468 SLC22A23A1A5C7 686 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 H3BN98 237 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 SOCS2O14508 198 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 KHDRBS3O75525 346 aaKnown RBP9.83□□□□□ -0.84
SF3B6-201ENST00000233468 TIPRLO75663 272 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 PPP1R3DO95685 299 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 IFNGP01579 166 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 IGKV3-15P01624 115 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 RAF1P04049 648 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 ZNF26P17031 533 aaPredicted RBP9.83□□□□□ -0.84
SF3B6-201ENST00000233468 CDH11P55287 796 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 RAB1AP62820 205 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 ADAM8P78325 824 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 PLP2Q04941 152 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 PPP1R8Q12972 351 aaKnown RBP9.83□□□□□ -0.84
SF3B6-201ENST00000233468 CCNIQ14094 377 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 MESTQ5EB52 335 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 CLEC12AQ5QGZ9 265 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 SLC25A47Q6Q0C1 308 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 PAMR1Q6UXH9 720 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 ZDHHC13Q8IUH4 622 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 SVOPLQ8N434 492 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 OR4F15Q8NGB8 312 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 OR5K1Q8NHB7 308 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 AKAP1Q92667 903 aaKnown RBP eCLIP9.83□□□□□ -0.84
SF3B6-201ENST00000233468 FBXW5Q969U6 566 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 NMD3Q96D46 503 aaKnown RBP9.83□□□□□ -0.84
SF3B6-201ENST00000233468 SMR3AQ99954 134 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 TSSK6Q9BXA6 273 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 OSBPL10Q9BXB5 764 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 NELFAQ9H3P2 528 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 SEC61A2Q9H9S3 476 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 UBTD1Q9HAC8 227 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 CCNB1IP1Q9NPC3 277 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 DLL4Q9NR61 685 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 VNN3Q9NY84 501 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 NPAP1Q9NZP6 1156 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 VSX1Q9NZR4 365 aaPredicted RBP9.83□□□□□ -0.84
SF3B6-201ENST00000233468 KLHL21Q9UJP4 597 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 SPEF1Q9Y4P9 236 aa9.83□□□□□ -0.84
SF3B6-201ENST00000233468 NSD1Q96L73 2696 aaPredicted RBP9.82□□□□□ -0.84
SF3B6-201ENST00000233468 ZANQ9Y493 2812 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 IQCMA0A1B0GVH7 501 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 A0A1W2PPL8 197 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms