RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 LCORQ96JN0 433 aaPredicted RBP13.02□□□□□ -0.33
SFXN3-201ENST00000224807 EMC3Q9P0I2 261 aa13.02□□□□□ -0.33
SFXN3-201ENST00000224807 CHRNA9Q9UGM1 479 aa13.02□□□□□ -0.33
SFXN3-201ENST00000224807 CSAG2Q9Y5P2 127 aa13.02□□□□□ -0.33
SFXN3-201ENST00000224807 A0A0B4J2E0 115 aa13.01□□□□□ -0.33
SFXN3-201ENST00000224807 A0A1B0GX12 115 aa13.01□□□□□ -0.33
SFXN3-201ENST00000224807 SNRNP70P08621 437 aaKnown RBP13.01□□□□□ -0.33
SFXN3-201ENST00000224807 TYRP1P17643 537 aa13.01□□□□□ -0.33
SFXN3-201ENST00000224807 GNALP38405 381 aa13.01□□□□□ -0.33
SFXN3-201ENST00000224807 GRK6P43250 576 aa13.01□□□□□ -0.33
SFXN3-201ENST00000224807 TRA2BP62995 288 aaKnown RBP13.01□□□□□ -0.33
SFXN3-201ENST00000224807 RAB11BQ15907 218 aa13.01□□□□□ -0.33
SFXN3-201ENST00000224807 ATPAF1Q5TC12 328 aaPredicted RBP13.01□□□□□ -0.33
SFXN3-201ENST00000224807 ENPP7Q6UWV6 458 aa13.01□□□□□ -0.33
SFXN3-201ENST00000224807 RNF113BQ8IZP6 322 aaKnown RBP13.01□□□□□ -0.33
SFXN3-201ENST00000224807 OR6N1Q8NGY5 312 aa13.01□□□□□ -0.33
SFXN3-201ENST00000224807 NR4A3Q92570 626 aa13.01□□□□□ -0.33
SFXN3-201ENST00000224807 TRIM2Q9C040 744 aa13.01□□□□□ -0.33
SFXN3-201ENST00000224807 CST11Q9H112 138 aa13.01□□□□□ -0.33
SFXN3-201ENST00000224807 GAREM1Q9H706 876 aa13.01□□□□□ -0.33
SFXN3-201ENST00000224807 ELOVL3Q9HB03 270 aa13.01□□□□□ -0.33
SFXN3-201ENST00000224807 RPS10P5Q9NQ39 176 aa13.01□□□□□ -0.33
SFXN3-201ENST00000224807 CDC14CA4D256 554 aa13.01□□□□□ -0.33
SFXN3-201ENST00000224807 XRCC3O43542 346 aa13.01□□□□□ -0.33
SFXN3-201ENST00000224807 ICOSLGO75144 302 aa13.01□□□□□ -0.33
SFXN3-201ENST00000224807 FABP1P07148 127 aa13.01□□□□□ -0.33
SFXN3-201ENST00000224807 CD80P33681 288 aa13.01□□□□□ -0.33
SFXN3-201ENST00000224807 ENPP2Q13822 863 aa13.01□□□□□ -0.33
SFXN3-201ENST00000224807 GFOD2Q3B7J2 385 aa13.01□□□□□ -0.33
SFXN3-201ENST00000224807 ITPRIPL2Q3MIP1 535 aa13.01□□□□□ -0.33
SFXN3-201ENST00000224807 ZNF585AQ6P3V2 769 aa13.01□□□□□ -0.33
SFXN3-201ENST00000224807 PM20D2Q8IYS1 436 aa13.01□□□□□ -0.33
SFXN3-201ENST00000224807 CCDC107Q8WV48 283 aa13.01□□□□□ -0.33
SFXN3-201ENST00000224807 TMPRSS13Q9BYE2 586 aa13.01□□□□□ -0.33
SFXN3-201ENST00000224807 PRMT8Q9NR22 394 aaPredicted RBP13.01□□□□□ -0.33
SFXN3-201ENST00000224807 M0R036 132 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 RPA2P15927 270 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 AVPI1Q5T686 147 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 C11orf87Q6NUJ2 197 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 RPL13AP3Q6NVV1 102 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 ABHD13Q7L211 337 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 SYS1Q8N2H4 156 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 OR2G2Q8NGZ5 317 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 PHOSPHO1Q8TCT1 267 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 CCDC74AQ96AQ1 378 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 LINC00615Q96LM1 132 aaPredicted RBP13□□□□□ -0.33
SFXN3-201ENST00000224807 C10orf90Q96M02 699 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 KLHDC3Q9BQ90 382 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 CCDC3Q9BQI4 270 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 POTEKPQ9BYX7 375 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 CENPMQ9NSP4 180 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 TBC1D29Q9UFV1 150 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 COL4A6Q14031 1691 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 GPRIN2O60269 458 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 LMX1BO60663 402 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 LY86O95711 162 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 IGKV1D-16P01601 117 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 TACSTD2P09758 323 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 ERGP11308 486 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 CD53P19397 219 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 CASRP41180 1078 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 BIKQ13323 160 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 C2orf27AQ580R0 203 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 ANKRD33Q7Z3H0 272 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 PRSS58Q8IYP2 241 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 POMGNT2Q8NAT1 580 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 ADAD2Q8NCV1 583 aaKnown RBP13□□□□□ -0.33
SFXN3-201ENST00000224807 ZNF563Q8TA94 476 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 CNTNAP3BQ96NU0 1288 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 PLEKHA1Q9HB21 404 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 TAS2R4Q9NYW5 299 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 GRHPRQ9UBQ7 328 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 SPTBN5Q9NRC6 3674 aaKnown RBP13□□□□□ -0.33
SFXN3-201ENST00000224807 KIF26BQ2KJY2 2108 aa13□□□□□ -0.33
SFXN3-201ENST00000224807 ADAP1O75689 374 aa12.99□□□□□ -0.33
SFXN3-201ENST00000224807 HTR3BO95264 441 aa12.99□□□□□ -0.33
SFXN3-201ENST00000224807 APBB3O95704 486 aa12.99□□□□□ -0.33
SFXN3-201ENST00000224807 PMP2P02689 132 aa12.99□□□□□ -0.33
SFXN3-201ENST00000224807 ACAA1P09110 424 aaPredicted RBP12.99□□□□□ -0.33
SFXN3-201ENST00000224807 CSF2RAP15509 400 aa12.99□□□□□ -0.33
SFXN3-201ENST00000224807 HOXA1P49639 335 aaPredicted RBP12.99□□□□□ -0.33
SFXN3-201ENST00000224807 ALG10Q5BKT4 473 aa12.99□□□□□ -0.33
SFXN3-201ENST00000224807 C9orf152Q5JTZ5 239 aa12.99□□□□□ -0.33
SFXN3-201ENST00000224807 LHX8Q68G74 356 aa12.99□□□□□ -0.33
SFXN3-201ENST00000224807 GPR148Q8TDV2 347 aa12.99□□□□□ -0.33
SFXN3-201ENST00000224807 NDRG3Q9UGV2 375 aa12.99□□□□□ -0.33
SFXN3-201ENST00000224807 DAPP1Q9UN19 280 aa12.99□□□□□ -0.33
SFXN3-201ENST00000224807 ARHGEF17Q96PE2 2063 aaPredicted RBP12.99□□□□□ -0.33
SFXN3-201ENST00000224807 POM121BA6NF01 834 aa12.99□□□□□ -0.33
SFXN3-201ENST00000224807 OR6C65A6NJZ3 312 aa12.99□□□□□ -0.33
SFXN3-201ENST00000224807 CDC40O60508 579 aaKnown RBP eCLIP12.99□□□□□ -0.33
SFXN3-201ENST00000224807 RNGTTO60942 597 aaKnown RBP12.99□□□□□ -0.33
SFXN3-201ENST00000224807 AQP8O94778 261 aa12.99□□□□□ -0.33
SFXN3-201ENST00000224807 LYPD3O95274 346 aa12.99□□□□□ -0.33
SFXN3-201ENST00000224807 GLI4P10075 376 aa12.99□□□□□ -0.33
SFXN3-201ENST00000224807 PPP1CAP62136 330 aa12.99□□□□□ -0.33
SFXN3-201ENST00000224807 DHODHQ02127 395 aa12.99□□□□□ -0.33
SFXN3-201ENST00000224807 EBPQ15125 230 aaKnown RBP12.99□□□□□ -0.33
SFXN3-201ENST00000224807 ZIC1Q15915 447 aa12.99□□□□□ -0.33
SFXN3-201ENST00000224807 RNASE10Q5GAN6 216 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms