RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 DBPQ10586 325 aaPredicted RBP11□□□□□ -0.65
LSM5-201ENST00000223084 SGCAQ16586 387 aa11□□□□□ -0.65
LSM5-201ENST00000223084 RFX4Q33E94 735 aa11□□□□□ -0.65
LSM5-201ENST00000223084 GPR139Q6DWJ6 353 aa11□□□□□ -0.65
LSM5-201ENST00000223084 VHLLQ6RSH7 139 aa11□□□□□ -0.65
LSM5-201ENST00000223084 PTCHD4Q6ZW05 846 aa11□□□□□ -0.65
LSM5-201ENST00000223084 SLC16A14Q7RTX9 510 aa11□□□□□ -0.65
LSM5-201ENST00000223084 TMEM179BQ7Z7N9 219 aa11□□□□□ -0.65
LSM5-201ENST00000223084 KRTAP1-3Q8IUG1 177 aa11□□□□□ -0.65
LSM5-201ENST00000223084 AQP11Q8NBQ7 271 aa11□□□□□ -0.65
LSM5-201ENST00000223084 NABP1Q96AH0 204 aa11□□□□□ -0.65
LSM5-201ENST00000223084 SLCO4A1Q96BD0 722 aa11□□□□□ -0.65
LSM5-201ENST00000223084 FOXN4Q96NZ1 517 aa11□□□□□ -0.65
LSM5-201ENST00000223084 ERMAPQ96PL5 475 aaPredicted RBP11□□□□□ -0.65
LSM5-201ENST00000223084 TRAF4Q9BUZ4 470 aaPredicted RBP11□□□□□ -0.65
LSM5-201ENST00000223084 IFT27Q9BW83 186 aa11□□□□□ -0.65
LSM5-201ENST00000223084 EGLN3Q9H6Z9 239 aa11□□□□□ -0.65
LSM5-201ENST00000223084 RNF121Q9H920 327 aa11□□□□□ -0.65
LSM5-201ENST00000223084 SMURF2Q9HAU4 748 aa11□□□□□ -0.65
LSM5-201ENST00000223084 CELSR1Q9NYQ6 3014 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 ARFGEF3Q5TH69 2177 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 FKBP6O75344 327 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 TXNDC12O95881 172 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 IGFBP1P08833 259 aaPredicted RBP10.99□□□□□ -0.65
LSM5-201ENST00000223084 NR2C1P13056 603 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 CTLA4P16410 223 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 SLC6A6P31641 620 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 CDKN2AP42771 156 aaKnown RBP10.99□□□□□ -0.65
LSM5-201ENST00000223084 RPS6KA3P51812 740 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 ADAM8P78325 824 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 NKX6-1P78426 367 aaPredicted RBP10.99□□□□□ -0.65
LSM5-201ENST00000223084 CBX1P83916 185 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 MICAQ29983 383 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 CLEC12AQ5QGZ9 265 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 OTPQ5XKR4 325 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 SPNS3Q6ZMD2 512 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 ZNF620Q6ZNG0 422 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 DTX2Q86UW9 622 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 ZNF584Q8IVC4 421 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 FBXL14Q8N1E6 418 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 LINC00471Q8N535 108 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 WFDC11Q8NEX6 87 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 OR10G2Q8NGC3 310 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 PLA2G12AQ9BZM1 189 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 SYT4Q9H2B2 425 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 LRMDAQ9H2I8 198 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 CXorf56Q9H5V9 222 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 RERGLQ9H628 205 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 DENND2DQ9H6A0 471 aaPredicted RBP10.99□□□□□ -0.65
LSM5-201ENST00000223084 SIAEQ9HAT2 523 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 MOV10Q9HCE1 1003 aaKnown RBP10.99□□□□□ -0.65
LSM5-201ENST00000223084 HIVEP1P15822 2718 aa10.99□□□□□ -0.65
LSM5-201ENST00000223084 OVOL3O00110 214 aa10.98□□□□□ -0.65
LSM5-201ENST00000223084 GNGT2O14610 69 aa10.98□□□□□ -0.65
LSM5-201ENST00000223084 SLC16A7O60669 478 aa10.98□□□□□ -0.65
LSM5-201ENST00000223084 MMP7P09237 267 aaPredicted RBP10.98□□□□□ -0.65
LSM5-201ENST00000223084 CCL2P13500 99 aa10.98□□□□□ -0.65
LSM5-201ENST00000223084 NPR2P20594 1047 aa10.98□□□□□ -0.65
LSM5-201ENST00000223084 LAP3P28838 519 aa10.98□□□□□ -0.65
LSM5-201ENST00000223084 APOBEC3AP31941 199 aaPredicted RBP10.98□□□□□ -0.65
LSM5-201ENST00000223084 SLC36A2Q495M3 483 aa10.98□□□□□ -0.65
LSM5-201ENST00000223084 NRN1LQ496H8 165 aa10.98□□□□□ -0.65
LSM5-201ENST00000223084 Q5PR19 223 aa10.98□□□□□ -0.65
LSM5-201ENST00000223084 AGAP6Q5VW22 663 aa10.98□□□□□ -0.65
LSM5-201ENST00000223084 KRT80Q6KB66 452 aa10.98□□□□□ -0.65
LSM5-201ENST00000223084 ZNF544Q6NX49 715 aa10.98□□□□□ -0.65
LSM5-201ENST00000223084 TMEM53Q6P2H8 277 aa10.98□□□□□ -0.65
LSM5-201ENST00000223084 FOXL2NBQ6ZUU3 175 aa10.98□□□□□ -0.65
LSM5-201ENST00000223084 MUC15Q8N387 334 aa10.98□□□□□ -0.65
LSM5-201ENST00000223084 OR8D4Q8NGM9 314 aa10.98□□□□□ -0.65
LSM5-201ENST00000223084 OR4K13Q8NH42 304 aa10.98□□□□□ -0.65
LSM5-201ENST00000223084 FNDC8Q8TC99 324 aa10.98□□□□□ -0.65
LSM5-201ENST00000223084 GIPC3Q8TF64 312 aa10.98□□□□□ -0.65
LSM5-201ENST00000223084 FBXO17Q96EF6 278 aa10.98□□□□□ -0.65
LSM5-201ENST00000223084 NIPSNAP1Q9BPW8 284 aa10.98□□□□□ -0.65
LSM5-201ENST00000223084 GSX2Q9BZM3 304 aa10.98□□□□□ -0.65
LSM5-201ENST00000223084 EMC7Q9NPA0 242 aa10.98□□□□□ -0.65
LSM5-201ENST00000223084 ZNF701Q9NV72 531 aaPredicted RBP10.98□□□□□ -0.65
LSM5-201ENST00000223084 FAIMQ9NVQ4 179 aa10.98□□□□□ -0.65
LSM5-201ENST00000223084 VSX1Q9NZR4 365 aaPredicted RBP10.98□□□□□ -0.65
LSM5-201ENST00000223084 CDH10Q9Y6N8 788 aa10.98□□□□□ -0.65
LSM5-201ENST00000223084 ACANP16112 2415 aa10.98□□□□□ -0.65
LSM5-201ENST00000223084 ARPC3O15145 178 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 MGRN1O60291 552 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 NDUFS7O75251 213 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 ENTPD5O75356 428 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 TIPRLO75663 272 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 MPZL1O95297 269 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 SOX14O95416 240 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 GPANK1O95872 356 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 SERPINA5P05154 406 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 ZNF35P13682 527 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 APEHP13798 732 aaKnown RBP10.97□□□□□ -0.65
LSM5-201ENST00000223084 HIST1H1CP16403 213 aaKnown RBP10.97□□□□□ -0.65
LSM5-201ENST00000223084 ZNF32P17041 273 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 THBS4P35443 961 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 ATP5J2P56134 94 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 SLC35F1Q5T1Q4 408 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 C1orf146Q5VVC0 180 aa10.97□□□□□ -0.65
LSM5-201ENST00000223084 C11orf71Q6IPW1 123 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms