RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 ANAPC16Q96DE5 110 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 VN1R3Q9BXE9 311 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 ULBP2Q9BZM5 246 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 METTL17Q9H7H0 456 aaPredicted RBP5.62□□□□□ -1.51
VPS13D-201ENST00000011700 H0YIG0 161 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 GP1BAP07359 652 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 STAG3L3P0CL85 134 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 CSNK1G2P78368 415 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 ADPRMQ3LIE5 342 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 UBE2UQ5VVX9 321 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 STXBP6Q8NFX7 210 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 ZNRF4Q8WWF5 429 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 TXNDC17Q9BRA2 123 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 WDR83Q9BRX9 315 aaKnown RBP5.62□□□□□ -1.51
VPS13D-201ENST00000011700 ST6GALNAC5Q9BVH7 336 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 GOLGA2P5Q9HBQ8 144 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 MANBALQ9NQG1 85 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 MRPS16Q9Y3D3 137 aaKnown RBP5.62□□□□□ -1.51
VPS13D-201ENST00000011700 H3BQ06 376 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-201ENST00000011700 GALR2O43603 387 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-201ENST00000011700 AQP8O94778 261 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 OR4E1P0C645 316 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 ARAFP10398 606 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 LGALS4P56470 323 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 CTF1Q16619 201 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 ODF4Q2M2E3 257 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 FAM217AQ8IXS0 508 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 RAB8BQ92930 207 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 DTD2Q96FN9 168 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 APOBEC3GQ9HC16 384 aaKnown RBP5.61□□□□□ -1.51
VPS13D-201ENST00000011700 FZD1Q9UP38 647 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 PRKAB1Q9Y478 270 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 ADAMTSL3P82987 1691 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 KCPQ6ZWJ8 1503 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 TMEM233B4DJY2 109 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 OR1D4P47884 311 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 OR10A3P58181 314 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 TEX19Q8NA77 164 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 AGBL5Q8NDL9 886 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 MEIS3P1A6NDR6 274 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 FAM74A7A6NL05 159 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 G3V2L1 256 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 ALX3O95076 343 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 F3P13726 295 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 TIMP2P16035 220 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 ACHEP22303 614 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 AOAHP28039 575 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 SEC13P55735 322 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 FXYD4P59646 89 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.61□□□□□ -1.51
VPS13D-201ENST00000011700 SLC5A12Q1EHB4 618 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 FAM213BQ8TBF2 198 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 RAB24Q969Q5 203 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 UTP23Q9BRU9 249 aaKnown RBP5.61□□□□□ -1.51
VPS13D-201ENST00000011700 PRSS16Q9NQE7 514 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 FTSJ1Q9UET6 329 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-201ENST00000011700 SLC35E2P0CK97 266 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 RPL7P18124 248 aaKnown RBP5.61□□□□□ -1.51
VPS13D-201ENST00000011700 DRD5P21918 477 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 PSMB6P28072 239 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 RAB38P57729 211 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 IHHQ14623 411 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 OPCMLQ14982 345 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 FCN2Q15485 313 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 RPE65Q16518 533 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 FAM182BQ5T319 152 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 TSEN54Q7Z6J9 526 aaKnown RBP5.61□□□□□ -1.51
VPS13D-201ENST00000011700 C2orf73Q8N5S3 287 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-201ENST00000011700 OR14J1Q9UGF5 321 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 TICRRQ7Z2Z1 1910 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 PDGFBP01127 241 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-201ENST00000011700 EPHA1P21709 976 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 AMTP48728 403 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 SUMO3P55854 103 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-201ENST00000011700 ADIRFQ15847 76 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 OGFOD3Q6PK18 319 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 C15orf39Q6ZRI6 1047 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 GDPD3Q7L5L3 318 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 SAT2Q96F10 170 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-201ENST00000011700 SGPP1Q9BX95 441 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF275Q9NSD4 429 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-201ENST00000011700 PSORS1C1Q9UIG5 152 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 GOLT1BQ9Y3E0 138 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 TIMM8BQ9Y5J9 83 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-201ENST00000011700 CRYM-AS1A6NIL9 109 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 NME4O00746 187 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 CLIC3O95833 236 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 CPN1P15169 458 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 GABREP78334 506 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 PRDX1Q06830 199 aaKnown RBP5.61□□□□□ -1.51
VPS13D-201ENST00000011700 MGAT3Q09327 533 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 OR1Q1Q15612 314 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF626Q68DY1 528 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 MEX3BQ6ZN04 569 aaKnown RBP5.61□□□□□ -1.51
VPS13D-201ENST00000011700 IGDCC3Q8IVU1 814 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 GALNT16Q8N428 558 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 MFSD9Q8NBP5 474 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 OR13C5Q8NGS8 318 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 CYB5D2Q8WUJ1 264 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms