RNA–Protein interactions for RNA: ENST00000637988.1

SCN1A-217, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-217ENST00000637988 NRG2O14511 850 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-217ENST00000637988 IMPA2O14732 288 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 FOSL1P15407 271 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 AREGP15514 252 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 AOAHP28039 575 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 MEP1BQ16820 701 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 Q56UQ5 140 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 CYP4V2Q6ZWL3 525 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-217ENST00000637988 ASCL5Q7RTU5 278 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 EGFL6Q8IUX8 553 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 PLPP6Q8IY26 295 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 GPR26Q8NDV2 337 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 OR11G2Q8NGC1 345 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 EBF4Q9BQW3 602 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 F2RL2O00254 374 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 GPR37O15354 613 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 CBR3O75828 277 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 NCR1O76036 304 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 LAMP1P11279 417 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 BMP5P22003 454 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 WNT4P56705 351 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 TMEM52BQ4KMG9 183 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 TP53I3Q53FA7 332 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 TFAP2EQ6VUC0 442 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 COX15Q7KZN9 410 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 CPOQ8IVL8 374 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 OR8B3Q8NGG8 313 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 OR9I1Q8NGQ6 314 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 OR2T11Q8NH01 316 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 EDARADDQ8WWZ3 215 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 MS4A4AQ96JQ5 239 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 OR8B2Q96RD0 313 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 SOX7Q9BT81 388 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 GPR87Q9BY21 358 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 PPA2Q9H2U2 334 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 ARMC1Q9NVT9 282 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 F5H5P2 479 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 INMT-MINDY4F8WBC2 141 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 F13BP05160 661 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 UBBP0CG47 229 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 TNFSF8P32971 234 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 LAPTM4AQ15012 233 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 PQLC3Q8N755 202 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 OR2AE1Q8NHA4 323 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 SUN5Q8TC36 379 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 FUBP1Q96AE4 644 aaKnown RBP5.64□□□□□ -1.51
SCN1A-217ENST00000637988 RPEQ96AT9 228 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 NSUN5Q96P11 429 aaKnown RBP5.64□□□□□ -1.51
SCN1A-217ENST00000637988 JAM3Q9BX67 310 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 GALNT9Q9HCQ5 603 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 KLK4Q9Y5K2 254 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 AGAP14A8MT82 685 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 SLC22A5O76082 557 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 TMEM267Q0VDI3 215 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-217ENST00000637988 FCRL6Q6DN72 434 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 ANKRD16Q6P6B7 361 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 DHRS13Q6UX07 377 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 Q6ZTK2 550 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 TCTE3Q8IZS6 198 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 SLC22A24Q8N4F4 322 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 NHLRC2Q8NBF2 726 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 CYB561A3Q8NBI2 242 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 TXLNGYQ9BZA5 131 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 MS4A7Q9GZW8 240 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-217ENST00000637988 SLC26A1Q9H2B4 701 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 GHITMQ9H3K2 345 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 FBXL17Q9UF56 701 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 TMEM59LQ9UK28 342 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 CCL26Q9Y258 94 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 ASB4Q9Y574 426 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 TNFRSF10AO00220 468 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 PIAS2O75928 621 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 SNRNP70P08621 437 aaKnown RBP5.64□□□□□ -1.51
SCN1A-217ENST00000637988 ZGLP1P0C6A0 271 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 FAM157BP0CG42 384 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 CD1CP29017 333 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 SELPLGQ14242 412 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 MICBQ29980 383 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 MEPCEQ7L2J0 689 aaKnown RBP5.64□□□□□ -1.51
SCN1A-217ENST00000637988 CD163Q86VB7 1156 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 MUC15Q8N387 334 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 DEFB108BQ8NET1 73 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 OR1M1Q8NGA1 313 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 GTF2H4Q92759 462 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 MRGPRX1Q96LB2 322 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 SERTM2A0A1B0GWG4 89 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 MROH6A6NGR9 719 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 HSPB2A8KAH6 182 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 WASH4PA8MWX3 477 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 ACP2P11117 423 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 PRKACGP22612 351 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 SSTR4P31391 388 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 MAP4K2Q12851 820 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 HSPB2Q16082 182 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 ARHGAP11BQ3KRB8 267 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 PRAMEF5Q5TYX0 476 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 PRAMEF6Q5VXH4 476 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 OR10G3Q8NGC4 313 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 OR2A14Q96R47 310 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 DLL4Q9NR61 685 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms