RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 MBOAT2Q6ZWT7 520 aa11.94□□□□□ -0.5
PNKP-228ENST00000637325 IGFN1Q86VF2 1251 aa11.94□□□□□ -0.5
PNKP-228ENST00000637325 SVOPLQ8N434 492 aa11.94□□□□□ -0.5
PNKP-228ENST00000637325 ANKS4BQ8N8V4 417 aa11.94□□□□□ -0.5
PNKP-228ENST00000637325 RBM15BQ8NDT2 890 aaKnown RBP11.94□□□□□ -0.5
PNKP-228ENST00000637325 OR10H5Q8NGA6 315 aa11.94□□□□□ -0.5
PNKP-228ENST00000637325 NSMAFQ92636 917 aa11.94□□□□□ -0.5
PNKP-228ENST00000637325 RBP7Q96R05 134 aa11.94□□□□□ -0.5
PNKP-228ENST00000637325 MRPL13Q9BYD1 178 aaKnown RBP11.94□□□□□ -0.5
PNKP-228ENST00000637325 NDEL1Q9GZM8 345 aa11.94□□□□□ -0.5
PNKP-228ENST00000637325 DYNLRB1Q9NP97 96 aa11.94□□□□□ -0.5
PNKP-228ENST00000637325 MAN2C1Q9NTJ4 1040 aa11.94□□□□□ -0.5
PNKP-228ENST00000637325 TAGLN3Q9UI15 199 aa11.94□□□□□ -0.5
PNKP-228ENST00000637325 A0A087WUU8 490 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 SH3PXD2BA1X283 911 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 NPIPB13A6NJU9 1138 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 NPIPB4C9JG80 1138 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 LY6HO94772 140 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 PTHP01270 115 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 SERPINA5P05154 406 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 H1F0P07305 194 aaKnown RBP11.93□□□□□ -0.5
PNKP-228ENST00000637325 ZNF35P13682 527 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 SLC25A16P16260 332 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 FUT4P22083 530 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 GPR4P46093 362 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 SLC9A3P48764 834 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 PPOXP50336 477 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 RPS23P62266 143 aaKnown RBP11.93□□□□□ -0.5
PNKP-228ENST00000637325 PLP2Q04941 152 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 ANKDD1AQ495B1 522 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 SAMD4BQ5PRF9 694 aaKnown RBP11.93□□□□□ -0.5
PNKP-228ENST00000637325 TBPL2Q6SJ96 375 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 PIGWQ7Z7B1 504 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 LRRC18Q8N456 261 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 OR13C2Q8NGS9 318 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 FGFBP3Q8TAT2 258 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 HDAC2Q92769 488 aaKnown RBP11.93□□□□□ -0.5
PNKP-228ENST00000637325 ZNF75AQ96N20 296 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 SORCS2Q96PQ0 1159 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 TNFRSF13CQ96RJ3 184 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 ALG12Q9BV10 488 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 LRMDAQ9H2I8 198 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 ANKRD19PQ9H560 264 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 NMNAT1Q9HAN9 279 aaPredicted RBP11.93□□□□□ -0.5
PNKP-228ENST00000637325 CDH20Q9HBT6 801 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 CCNB1IP1Q9NPC3 277 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 DCAF13Q9NV06 445 aaKnown RBP11.93□□□□□ -0.5
PNKP-228ENST00000637325 ZNF346Q9UL40 294 aaKnown RBP11.93□□□□□ -0.5
PNKP-228ENST00000637325 TMEM5Q9Y2B1 443 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 V9GYQ6 96 aa11.93□□□□□ -0.5
PNKP-228ENST00000637325 IQCMA0A1B0GVH7 501 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 A6NIZ1 184 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 INAFM1C9JVW0 142 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 MGRN1O60291 552 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 PRSS23O95084 383 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 SLC2A10O95528 541 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 RHCEP18577 417 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 GLRXP35754 106 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 RPL4P36578 427 aaKnown RBP11.92□□□□□ -0.5
PNKP-228ENST00000637325 GUCA1AP43080 201 aaPredicted RBP11.92□□□□□ -0.5
PNKP-228ENST00000637325 RAP1BP61224 184 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 RAP1AP62834 184 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 HSF2Q03933 536 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 SGCAQ16586 387 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 NRN1LQ496H8 165 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 FGD3Q5JSP0 725 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 C10orf128Q5T292 105 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 FAM205BPQ63HN1 556 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 PODNL1Q6PEZ8 512 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 C16orf89Q6UX73 402 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 PGAM4Q8N0Y7 254 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 FAM156AQ8NDB6 213 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 SLC30A7Q8NEW0 376 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 OR1J2Q8NGS2 313 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 FNDC8Q8TC99 324 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 C10orf105Q8TEF2 133 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 CDRT15Q96T59 188 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 SEPHS2Q99611 448 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 DOK1Q99704 481 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 C1orf198Q9H425 327 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 GORASP2Q9H8Y8 452 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 SIAEQ9HAT2 523 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 SMURF2Q9HAU4 748 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 MYOZ1Q9NP98 299 aaPredicted RBP11.92□□□□□ -0.5
PNKP-228ENST00000637325 KRCC1Q9NPI7 259 aaPredicted RBP11.92□□□□□ -0.5
PNKP-228ENST00000637325 ARL8BQ9NVJ2 186 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 NDE1Q9NXR1 346 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 SLC7A8Q9UHI5 535 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 MAGEL2Q9UJ55 1249 aa11.92□□□□□ -0.5
PNKP-228ENST00000637325 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.91□□□□□ -0.52e-7■■■□□ 17.5
PNKP-228ENST00000637325 TMEM129A0AVI4 362 aa11.91□□□□□ -0.5
PNKP-228ENST00000637325 SLC22A23A1A5C7 686 aa11.91□□□□□ -0.5
PNKP-228ENST00000637325 GPRIN2O60269 458 aa11.91□□□□□ -0.5
PNKP-228ENST00000637325 IGHMP01871 453 aa11.91□□□□□ -0.5
PNKP-228ENST00000637325 ITGA2P17301 1181 aa11.91□□□□□ -0.5
PNKP-228ENST00000637325 CDAP32320 146 aa11.91□□□□□ -0.5
PNKP-228ENST00000637325 ZNF133P52736 654 aaPredicted RBP11.91□□□□□ -0.5
PNKP-228ENST00000637325 ERVK-25P63136 954 aa11.91□□□□□ -0.5
PNKP-228ENST00000637325 FMODQ06828 376 aa11.91□□□□□ -0.5
PNKP-228ENST00000637325 TBC1D28Q2M2D7 210 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms