RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 MZT2BQ6NZ67 158 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 CHMP1BQ7LBR1 199 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 FAM71CQ8NEG0 241 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 OR4K13Q8NH42 304 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 RHBDD1Q8TEB9 315 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 CREB3L1Q96BA8 519 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 SCMH1Q96GD3 660 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 GPR61Q9BZJ8 451 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 SPIN1Q9Y657 262 aaPredicted RBP10.43□□□□□ -0.74
CLN6-217ENST00000636964 IGKV1D-42A0A075B6H8 117 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 FAM86C2PA6NEL3 165 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 BLOC1S5-TXNDC5H3BN57 136 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 KLK3P07288 261 aaPredicted RBP10.43□□□□□ -0.74
CLN6-217ENST00000636964 MRPL3P09001 348 aaKnown RBP10.43□□□□□ -0.74
CLN6-217ENST00000636964 LIMS3P0CW19 117 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 LIMS4P0CW20 117 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 CPEP16870 476 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 ZP3P21754 424 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 TACR3P29371 465 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 ZNF81P51508 661 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 CLDN6P56747 220 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 C1DQ13901 141 aaKnown RBP10.43□□□□□ -0.74
CLN6-217ENST00000636964 ANGPT1Q15389 498 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 ZSWIM7Q19AV6 140 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 ZNF791Q3KP31 576 aaPredicted RBP10.43□□□□□ -0.74
CLN6-217ENST00000636964 SIRT6Q8N6T7 355 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 OR51L1Q8NGJ5 315 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 SPSB2Q99619 263 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 EVA1AQ9H8M9 152 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 KLHL1Q9NR64 748 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 ZNF222Q9UK12 451 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 IER3IP1Q9Y5U9 82 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 SESN1Q9Y6P5 492 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 C7orf66A4D0T2 115 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 PRR23D1E9PI22 279 aaPredicted RBP10.42□□□□□ -0.74
CLN6-217ENST00000636964 IMPA2O14732 288 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 RAB3DO95716 219 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 PRR23D2P0DMB1 279 aaPredicted RBP10.42□□□□□ -0.74
CLN6-217ENST00000636964 RAB13P51153 203 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 DUSP3P51452 185 aaPredicted RBP10.42□□□□□ -0.74
CLN6-217ENST00000636964 FBXW4P57775 412 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 PAN3Q58A45 887 aaKnown RBP10.42□□□□□ -0.74
CLN6-217ENST00000636964 SAPCD1Q5SSQ6 148 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 ATRAIDQ6UW56 229 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 HDDC2Q7Z4H3 204 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 ZNF440Q8IYI8 595 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 SDR9C7Q8NEX9 313 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 OR52E2Q8NGJ4 325 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 DUSP19Q8WTR2 217 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 CXorf58Q96LI9 332 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 FGF20Q9NP95 211 aaPredicted RBP10.42□□□□□ -0.74
CLN6-217ENST00000636964 MED17Q9NVC6 651 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 GRHPRQ9UBQ7 328 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 FKBP7Q9Y680 259 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 R4GN57 208 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 ASPMQ8IZT6 3477 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 TRBV11-1A0A0K0K1C0 115 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 A0A1W2PPL8 197 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 MFSD2BA6NFX1 497 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 LGALS8O00214 317 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 NTN3O00634 580 aaPredicted RBP10.42□□□□□ -0.74
CLN6-217ENST00000636964 CIDEAO60543 219 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 QDPRP09417 244 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 HTR1FP30939 366 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 C3orf38Q5JPI3 329 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 ATG4DQ86TL0 474 aaPredicted RBP10.42□□□□□ -0.74
CLN6-217ENST00000636964 NR2C2APQ86WQ0 139 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 ZNF441Q8N8Z8 693 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 NFAM1Q8NET5 270 aaPredicted RBP10.42□□□□□ -0.74
CLN6-217ENST00000636964 FN3KQ9H479 309 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 NIT2Q9NQR4 276 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 CMC2Q9NRP2 79 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 MRPS18AQ9NVS2 196 aaKnown RBP10.42□□□□□ -0.74
CLN6-217ENST00000636964 RDH8Q9NYR8 311 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 UBQLN2Q9UHD9 624 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 ICAM5Q9UMF0 924 aa10.42□□□□□ -0.74
CLN6-217ENST00000636964 C4orf47A7E2U8 309 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 CDC40O60508 579 aaKnown RBP eCLIP10.41□□□□□ -0.744e-7■■□□□ 14.1
CLN6-217ENST00000636964 LDOC1O95751 146 aaPredicted RBP10.41□□□□□ -0.74
CLN6-217ENST00000636964 POU3F2P20265 443 aaPredicted RBP10.41□□□□□ -0.74
CLN6-217ENST00000636964 PAICSP22234 425 aaKnown RBP10.41□□□□□ -0.74
CLN6-217ENST00000636964 SLC6A6P31641 620 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 SLC1A3P43003 542 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 WNT4P56705 351 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 RPL13AP3Q6NVV1 102 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 NIPAL3Q6P499 406 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 FAM98AQ8NCA5 519 aaKnown RBP10.41□□□□□ -0.74
CLN6-217ENST00000636964 AGBL5Q8NDL9 886 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 AKR7LQ8NHP1 331 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 MOSPD2Q8NHP6 518 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 KTI12Q96EK9 354 aaPredicted RBP10.41□□□□□ -0.74
CLN6-217ENST00000636964 DMRTA2Q96SC8 542 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 WDR77Q9BQA1 342 aaPredicted RBP10.41□□□□□ -0.74
CLN6-217ENST00000636964 MED18Q9BUE0 208 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 EMC7Q9NPA0 242 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 NPFFR2Q9Y5X5 522 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 AHCTF1Q8WYP5 2266 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 RIIAD1A6NNX1 92 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 TEX46H3BTG2 121 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 SIGLEC5O15389 551 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms