RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 ZNF716A6NP11 495 aa12.83□□□□□ -0.35
LINC00339-208ENST00000634934 LOC110117498-PIK3R3F6TDL0 507 aa12.83□□□□□ -0.35
LINC00339-208ENST00000634934 CD14P08571 375 aa12.83□□□□□ -0.35
LINC00339-208ENST00000634934 IFNGR1P15260 489 aa12.83□□□□□ -0.35
LINC00339-208ENST00000634934 GINS1Q14691 196 aa12.83□□□□□ -0.35
LINC00339-208ENST00000634934 POU4F3Q15319 338 aa12.83□□□□□ -0.35
LINC00339-208ENST00000634934 ACKR1Q16570 336 aa12.83□□□□□ -0.35
LINC00339-208ENST00000634934 TMEM236Q5W0B7 351 aa12.83□□□□□ -0.35
LINC00339-208ENST00000634934 OR2A2Q6IF42 318 aa12.83□□□□□ -0.35
LINC00339-208ENST00000634934 SEM1Q6ZVN7 128 aa12.83□□□□□ -0.35
LINC00339-208ENST00000634934 CREB3L2Q70SY1 520 aa12.83□□□□□ -0.35
LINC00339-208ENST00000634934 SLC35D2Q76EJ3 337 aa12.83□□□□□ -0.35
LINC00339-208ENST00000634934 ATCAYQ86WG3 371 aa12.83□□□□□ -0.35
LINC00339-208ENST00000634934 TUSC5Q8IXB3 177 aa12.83□□□□□ -0.35
LINC00339-208ENST00000634934 CADM3Q8N126 398 aa12.83□□□□□ -0.35
LINC00339-208ENST00000634934 OR2T33Q8NG76 320 aa12.83□□□□□ -0.35
LINC00339-208ENST00000634934 INTS12Q96CB8 462 aaKnown RBP12.83□□□□□ -0.35
LINC00339-208ENST00000634934 TTYH2Q9BSA4 534 aa12.83□□□□□ -0.35
LINC00339-208ENST00000634934 CCDC32Q9BV29 185 aa12.83□□□□□ -0.35
LINC00339-208ENST00000634934 CDADC1Q9BWV3 514 aa12.83□□□□□ -0.35
LINC00339-208ENST00000634934 IMPAD1Q9NX62 359 aa12.83□□□□□ -0.35
LINC00339-208ENST00000634934 MED29Q9NX70 200 aa12.83□□□□□ -0.35
LINC00339-208ENST00000634934 NPAP1Q9NZP6 1156 aa12.83□□□□□ -0.35
LINC00339-208ENST00000634934 EMC3Q9P0I2 261 aa12.83□□□□□ -0.35
LINC00339-208ENST00000634934 ADAM18Q9Y3Q7 739 aa12.83□□□□□ -0.35
LINC00339-208ENST00000634934 MBD3L4A6NDZ8 208 aaPredicted RBP12.83□□□□□ -0.36
LINC00339-208ENST00000634934 MBD3L3A6NE82 208 aaPredicted RBP12.83□□□□□ -0.36
LINC00339-208ENST00000634934 MBD3L5A6NJ08 208 aaPredicted RBP12.83□□□□□ -0.36
LINC00339-208ENST00000634934 GPR171O14626 319 aa12.83□□□□□ -0.36
LINC00339-208ENST00000634934 TRAF3IP2O43734 574 aaPredicted RBP12.83□□□□□ -0.36
LINC00339-208ENST00000634934 IL2RAP01589 272 aa12.83□□□□□ -0.36
LINC00339-208ENST00000634934 YES1P07947 543 aa12.83□□□□□ -0.36
LINC00339-208ENST00000634934 GLI4P10075 376 aa12.83□□□□□ -0.36
LINC00339-208ENST00000634934 GADD45AP24522 165 aa12.83□□□□□ -0.36
LINC00339-208ENST00000634934 NOS3P29474 1203 aa12.83□□□□□ -0.36
LINC00339-208ENST00000634934 CA7P43166 264 aa12.83□□□□□ -0.36
LINC00339-208ENST00000634934 GIPRP48546 466 aa12.83□□□□□ -0.36
LINC00339-208ENST00000634934 SLC16A1P53985 500 aa12.83□□□□□ -0.36
LINC00339-208ENST00000634934 CLDN17P56750 224 aa12.83□□□□□ -0.36
LINC00339-208ENST00000634934 PMPCAQ10713 525 aa12.83□□□□□ -0.36
LINC00339-208ENST00000634934 MELKQ14680 651 aa12.83□□□□□ -0.36
LINC00339-208ENST00000634934 PTGES3Q15185 160 aaKnown RBP12.83□□□□□ -0.36
LINC00339-208ENST00000634934 EIF2S3LQ2VIR3 472 aaKnown RBP12.83□□□□□ -0.36
LINC00339-208ENST00000634934 SLX4IPQ5VYV7 408 aa12.83□□□□□ -0.36
LINC00339-208ENST00000634934 SLC27A4Q6P1M0 643 aa12.83□□□□□ -0.36
LINC00339-208ENST00000634934 LYSMD2Q8IV50 215 aa12.83□□□□□ -0.36
LINC00339-208ENST00000634934 STX19Q8N4C7 294 aa12.83□□□□□ -0.36
LINC00339-208ENST00000634934 MBD3L2Q8NHZ7 208 aaPredicted RBP12.83□□□□□ -0.36
LINC00339-208ENST00000634934 GMPPAQ96IJ6 420 aaPredicted RBP12.83□□□□□ -0.36
LINC00339-208ENST00000634934 ERMAPQ96PL5 475 aaPredicted RBP12.83□□□□□ -0.36
LINC00339-208ENST00000634934 ZNF385AQ96PM9 386 aaKnown RBP12.83□□□□□ -0.36
LINC00339-208ENST00000634934 GPX7Q96SL4 187 aaPredicted RBP12.83□□□□□ -0.36
LINC00339-208ENST00000634934 RHNO1Q9BSD3 238 aa12.83□□□□□ -0.36
LINC00339-208ENST00000634934 TXNIPQ9H3M7 391 aa12.83□□□□□ -0.36
LINC00339-208ENST00000634934 FANCFQ9NPI8 374 aa12.83□□□□□ -0.36
LINC00339-208ENST00000634934 NRIP3Q9NQ35 241 aa12.83□□□□□ -0.36
LINC00339-208ENST00000634934 CLN6Q9NWW5 311 aa12.83□□□□□ -0.36
LINC00339-208ENST00000634934 GRHPRQ9UBQ7 328 aa12.83□□□□□ -0.36
LINC00339-208ENST00000634934 ING1Q9UK53 422 aaPredicted RBP12.83□□□□□ -0.36
LINC00339-208ENST00000634934 ZNF346Q9UL40 294 aaKnown RBP12.83□□□□□ -0.36
LINC00339-208ENST00000634934 FLVCR1Q9Y5Y0 555 aa12.83□□□□□ -0.36
LINC00339-208ENST00000634934 IGKV3D-15A0A087WSY6 115 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 SLC35F4A4IF30 521 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 E9PLN8 166 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 ATP6V1G1O75348 118 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 TOXO94900 526 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 NR4A1P22736 598 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 C21orf33P30042 268 aaPredicted RBP12.82□□□□□ -0.36
LINC00339-208ENST00000634934 S100A5P33763 92 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 SOX6P35712 828 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 DAP3P51398 398 aaKnown RBP12.82□□□□□ -0.36
LINC00339-208ENST00000634934 SMSP52788 366 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 BIDP55957 195 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 RPL27P61353 136 aaKnown RBP12.82□□□□□ -0.36
LINC00339-208ENST00000634934 SIRPAP78324 504 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 ST3GAL4Q11206 333 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 OCLNQ16625 522 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 PGGHGQ32M88 737 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 SLC35F1Q5T1Q4 408 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 C12orf73Q69YU5 71 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 CNEP1R1Q8N9A8 125 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 ZIC4Q8N9L1 334 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 OR4Q3Q8NH05 313 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 PRR7Q8TB68 274 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 SETD6Q8TBK2 473 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 RPL3LQ92901 407 aaKnown RBP12.82□□□□□ -0.36
LINC00339-208ENST00000634934 UBE2FQ969M7 185 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 Q96M85 177 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 TSPAN32Q96QS1 320 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 VKORC1Q9BQB6 163 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 EMC6Q9BV81 110 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 BCO1Q9HAY6 547 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 GLRX2Q9NS18 164 aa12.82□□□□□ -0.36
LINC00339-208ENST00000634934 NOSIPQ9Y314 301 aaKnown RBP12.82□□□□□ -0.36
LINC00339-208ENST00000634934 KIAA1549Q9HCM3 1950 aa12.81□□□□□ -0.36
LINC00339-208ENST00000634934 POLEQ07864 2286 aa12.81□□□□□ -0.36
LINC00339-208ENST00000634934 TEX13CA0A0J9YWL9 993 aa12.81□□□□□ -0.36
LINC00339-208ENST00000634934 ZNF726A6NNF4 738 aa12.81□□□□□ -0.36
LINC00339-208ENST00000634934 ZNF724A8MTY0 619 aa12.81□□□□□ -0.36
LINC00339-208ENST00000634934 CCRL2O00421 344 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms