RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 HYAL4Q2M3T9 481 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 MZT2BQ6NZ67 158 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 CORO6Q6QEF8 472 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 GPAT4Q86UL3 456 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 ZNF248Q8NDW4 579 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 OR6F1Q8NGZ6 308 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 TMEM234Q8WY98 164 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 NAT6Q93015 286 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 TMEM106AQ96A25 262 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 GAL3ST1Q99999 423 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 NEK6Q9HC98 313 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 TCF7L1Q9HCS4 588 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 FBXL2Q9UKC9 423 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 PTRH2Q9Y3E5 179 aaKnown RBP11.17□□□□□ -0.62
CIITA-212ENST00000618207 FAM186AA6NE01 2351 aa11.16□□□□□ -0.62
CIITA-212ENST00000618207 NPIPB7O75200 414 aa11.16□□□□□ -0.62
CIITA-212ENST00000618207 TLE3Q04726 772 aa11.16□□□□□ -0.62
CIITA-212ENST00000618207 PUDPQ08623 228 aa11.16□□□□□ -0.62
CIITA-212ENST00000618207 GPR176Q14439 515 aa11.16□□□□□ -0.62
CIITA-212ENST00000618207 CCDC58Q4VC31 144 aa11.16□□□□□ -0.62
CIITA-212ENST00000618207 ZNF684Q5T5D7 378 aa11.16□□□□□ -0.62
CIITA-212ENST00000618207 ZNF385CQ66K41 422 aaPredicted RBP11.16□□□□□ -0.62
CIITA-212ENST00000618207 METAP1DQ6UB28 335 aaPredicted RBP11.16□□□□□ -0.62
CIITA-212ENST00000618207 MAML2Q8IZL2 1156 aaPredicted RBP11.16□□□□□ -0.62
CIITA-212ENST00000618207 OR2G2Q8NGZ5 317 aa11.16□□□□□ -0.62
CIITA-212ENST00000618207 MAP6Q96JE9 813 aa11.16□□□□□ -0.62
CIITA-212ENST00000618207 TXNIPQ9H3M7 391 aa11.16□□□□□ -0.62
CIITA-212ENST00000618207 AUNIPQ9H7T9 357 aa11.16□□□□□ -0.62
CIITA-212ENST00000618207 LIN7BQ9HAP6 207 aa11.16□□□□□ -0.62
CIITA-212ENST00000618207 MRPL22Q9NWU5 206 aaKnown RBP11.16□□□□□ -0.62
CIITA-212ENST00000618207 TRAV8-7A0A075B6U6 113 aa11.16□□□□□ -0.62
CIITA-212ENST00000618207 IGKV1D-43A0A0B4J1Z2 117 aa11.16□□□□□ -0.62
CIITA-212ENST00000618207 CENPBD1B2RD01 187 aa11.16□□□□□ -0.62
CIITA-212ENST00000618207 SLC43A1O75387 559 aa11.16□□□□□ -0.62
CIITA-212ENST00000618207 ZFAND5O76080 213 aa11.16□□□□□ -0.62
CIITA-212ENST00000618207 PNLIPP16233 465 aa11.16□□□□□ -0.62
CIITA-212ENST00000618207 AGFG1P52594 562 aaKnown RBP11.16□□□□□ -0.62
CIITA-212ENST00000618207 EFR3AQ14156 821 aa11.16□□□□□ -0.62
CIITA-212ENST00000618207 EMC4Q5J8M3 183 aa11.16□□□□□ -0.62
CIITA-212ENST00000618207 CHAC2Q8WUX2 184 aa11.16□□□□□ -0.62
CIITA-212ENST00000618207 TSEN15Q8WW01 171 aaKnown RBP11.16□□□□□ -0.62
CIITA-212ENST00000618207 BEX1Q9HBH7 125 aa11.16□□□□□ -0.62
CIITA-212ENST00000618207 ANKRD10Q9NXR5 420 aa11.16□□□□□ -0.62
CIITA-212ENST00000618207 TRAV1-2A0A0B4J238 106 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 TRABD2BA6NFA1 517 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 EFNA2O43921 213 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 GATBO75879 557 aaKnown RBP11.15□□□□□ -0.62
CIITA-212ENST00000618207 MT-ATP6P00846 226 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 ANKRD34CP0C6C1 535 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 HSF2Q03933 536 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 TRILQ7L0X0 811 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 LINGO2Q7L985 606 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 TMPRSS12Q86WS5 348 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 C1orf210Q8IVY1 113 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 CMTM4Q8IZR5 234 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 PRSS35Q8N3Z0 413 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 KCTD12Q96CX2 325 aaKnown RBP11.15□□□□□ -0.62
CIITA-212ENST00000618207 JSRP1Q96MG2 331 aaPredicted RBP11.15□□□□□ -0.62
CIITA-212ENST00000618207 DHRS9Q9BPW9 319 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 SLC22A23A1A5C7 686 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 D6RAR5 112 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 NPIPA5E9PKD4 350 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 MS4A18H0YCH9 400 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 OR2T1O43869 369 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 DXOO77932 396 aaKnown RBP11.15□□□□□ -0.62
CIITA-212ENST00000618207 ABHD16AO95870 558 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 PNPP00491 289 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 BTF3P20290 206 aaKnown RBP11.15□□□□□ -0.62
CIITA-212ENST00000618207 M6PRP20645 277 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 RBMS1P29558 406 aaKnown RBP11.15□□□□□ -0.62
CIITA-212ENST00000618207 ZNF41P51814 821 aaPredicted RBP11.15□□□□□ -0.62
CIITA-212ENST00000618207 EIF2B1Q14232 305 aaKnown RBP11.15□□□□□ -0.62
CIITA-212ENST00000618207 MS4A18Q3C1V0 323 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 YIF1BQ5BJH7 314 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 WDR38Q5JTN6 314 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 STAC2Q6ZMT1 411 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 KRT77Q7Z794 578 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 WDR5BQ86VZ2 330 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 OR5L2Q8NGL0 311 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 OTOSQ8NHW6 89 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 NUBPLQ8TB37 319 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 RASL10BQ96S79 203 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 KCNK15Q9H427 330 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 CENPMQ9NSP4 180 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 GPN3Q9UHW5 284 aaPredicted RBP11.15□□□□□ -0.62
CIITA-212ENST00000618207 NPIPA1Q9UND3 350 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 ALG5Q9Y673 324 aa11.15□□□□□ -0.62
CIITA-212ENST00000618207 ANKUB1A6NFN9 424 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 VSTM2BA6NLU5 285 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 IFITM5A6NNB3 132 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 GPRIN2O60269 458 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 ITGA10O75578 1167 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 IGF2P01344 180 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 KLK3P07288 261 aaPredicted RBP11.14□□□□□ -0.63
CIITA-212ENST00000618207 ADRA2CP18825 462 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 LCN1P31025 176 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 DDOSTP39656 456 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 RPS15P62841 145 aaKnown RBP11.14□□□□□ -0.63
CIITA-212ENST00000618207 MRPS15P82914 257 aaKnown RBP11.14□□□□□ -0.63
CIITA-212ENST00000618207 SF3A2Q15428 464 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms