RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 KCNS3Q9BQ31 491 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 SAP130Q9H0E3 1048 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 SHARPINQ9H0F6 387 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 RANBP3Q9H6Z4 567 aaPredicted RBP7.56□□□□□ -1.2
GPC6-202ENST00000617456 BARX1Q9HBU1 254 aaPredicted RBP7.56□□□□□ -1.2
GPC6-202ENST00000617456 AKIP1Q9NQ31 210 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 ABCD2Q9UBJ2 740 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 EGFL7Q9UHF1 273 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 VDAC3Q9Y277 283 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 CORINQ9Y5Q5 1042 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 FKBP7Q9Y680 259 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 HSPE1-MOB4S4R3N1 261 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 A0A0J9YW62 118 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 MFSD2BA6NFX1 497 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 SERINC4A6NH21 518 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 MARCH11A6NNE9 402 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 GTPBP1O00178 669 aaKnown RBP7.55□□□□□ -1.2
GPC6-202ENST00000617456 ZNF195O14628 629 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 TNFSF11O14788 317 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 TSPAN4O14817 238 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 ANKRD28O15084 1053 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 CFLARO15519 480 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 DNPH1O43598 174 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 CXCL13O43927 109 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 SCN2BO60939 215 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 DEAF1O75398 565 aaPredicted RBP7.55□□□□□ -1.2
GPC6-202ENST00000617456 PRKD3O94806 890 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 C6orf47O95873 294 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 PTTG1O95997 202 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 CD8AP01732 235 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 MATN1P21941 496 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 UQCRC2P22695 453 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 CRABP1P29762 137 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 ERP29P30040 261 aaKnown RBP7.55□□□□□ -1.2
GPC6-202ENST00000617456 APOBEC1P41238 236 aaKnown RBP7.55□□□□□ -1.2
GPC6-202ENST00000617456 SLC1A6P48664 564 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 VEGFCP49767 419 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 CCR9P51686 369 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 NUDT6P53370 316 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 ZNF117Q03924 483 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 CD226Q15762 336 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 ZNF239Q16600 458 aaKnown RBP7.55□□□□□ -1.2
GPC6-202ENST00000617456 ZSWIM7Q19AV6 140 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 TMEM249Q2WGJ8 235 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 PGGHGQ32M88 737 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 CGB2Q6NT52 195 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 FDX2Q6P4F2 183 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 ZCCHC23Q6ZST2 131 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 IL17RELQ6ZVW7 336 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 EIF3MQ7L2H7 374 aaKnown RBP7.55□□□□□ -1.2
GPC6-202ENST00000617456 ZAR1Q86SH2 424 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 GALNT10Q86SR1 603 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 CMIPQ8IY22 773 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 TIGD4Q8IY51 512 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 KRTCAP2Q8N6L1 136 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 C10orf53Q8N6V4 93 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 GLB1L3Q8NCI6 653 aaPredicted RBP7.55□□□□□ -1.2
GPC6-202ENST00000617456 OR6Q1Q8NGQ2 317 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 ZFAND1Q8TCF1 268 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 SLC25A43Q8WUT9 341 aaPredicted RBP7.55□□□□□ -1.2
GPC6-202ENST00000617456 DUS3LQ96G46 650 aaKnown RBP7.55□□□□□ -1.2
GPC6-202ENST00000617456 NSL1Q96IY1 281 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 OR7D2Q96RA2 312 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 SORT1Q99523 831 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 C2orf88Q9BSF0 95 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 CHID1Q9BWS9 393 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 DPY30Q9C005 99 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 ZNF350Q9GZX5 532 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 LAT2Q9GZY6 243 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 C1orf21Q9H246 121 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 ESRP2Q9H6T0 727 aaKnown RBP7.55□□□□□ -1.2
GPC6-202ENST00000617456 AKTIPQ9H8T0 292 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 MEAF6Q9HAF1 191 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 BCO1Q9HAY6 547 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 NGBQ9NPG2 151 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 EXOSC3Q9NQT5 275 aaKnown RBP7.55□□□□□ -1.2
GPC6-202ENST00000617456 FBXO34Q9NWN3 711 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 ZIM2Q9NZV7 527 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 SLC35A3Q9Y2D2 325 aa7.55□□□□□ -1.2
GPC6-202ENST00000617456 PLCE1Q9P212 2302 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 A0A087WXM4 84 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 LOC100506127A0A0U1RQW1 187 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 ZNF724A8MTY0 619 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 RAMP1O60894 148 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 ZNF780AO75290 641 aaPredicted RBP7.54□□□□□ -1.2
GPC6-202ENST00000617456 CIB2O75838 187 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 RPP14O95059 124 aaKnown RBP7.54□□□□□ -1.2
GPC6-202ENST00000617456 H6PDO95479 791 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 LCKP06239 509 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 GSNP06396 782 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 FCER2P06734 321 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 CLEC2LP0C7M8 214 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 PSKH1P11801 424 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 CREB1P16220 341 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 SPI1P17947 270 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 LBPP18428 481 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 PGCP20142 388 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 PTAFRP25105 342 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 AGTR1P30556 359 aa7.54□□□□□ -1.2
GPC6-202ENST00000617456 APOBEC3AP31941 199 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms