RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 SELENOWP63302 87 aa16.36■□□□□ 0.21
CDX1-202ENST00000616154 NPRL3Q12980 569 aa16.36■□□□□ 0.21
CDX1-202ENST00000616154 C1orf146Q5VVC0 180 aa16.36■□□□□ 0.21
CDX1-202ENST00000616154 WDFY1Q8IWB7 410 aa16.36■□□□□ 0.21
CDX1-202ENST00000616154 HPS1Q92902 700 aa16.36■□□□□ 0.21
CDX1-202ENST00000616154 FAM162AQ96A26 154 aa16.36■□□□□ 0.21
CDX1-202ENST00000616154 TRIM15Q9C019 465 aa16.36■□□□□ 0.21
CDX1-202ENST00000616154 DENND2DQ9H6A0 471 aaPredicted RBP16.36■□□□□ 0.21
CDX1-202ENST00000616154 NOX3Q9HBY0 568 aa16.36■□□□□ 0.21
CDX1-202ENST00000616154 NANSQ9NR45 359 aa16.36■□□□□ 0.21
CDX1-202ENST00000616154 MED29Q9NX70 200 aa16.36■□□□□ 0.21
CDX1-202ENST00000616154 LRP5LA4QPB2 252 aa16.35■□□□□ 0.21
CDX1-202ENST00000616154 CH25HO95992 272 aa16.35■□□□□ 0.21
CDX1-202ENST00000616154 SERPINA1P01009 418 aa16.35■□□□□ 0.21
CDX1-202ENST00000616154 MT-ND1P03886 318 aa16.35■□□□□ 0.21
CDX1-202ENST00000616154 IGFBP1P08833 259 aaPredicted RBP16.35■□□□□ 0.21
CDX1-202ENST00000616154 CAPZA2P47755 286 aa16.35■□□□□ 0.21
CDX1-202ENST00000616154 CHN2P52757 468 aa16.35■□□□□ 0.21
CDX1-202ENST00000616154 IL1RL1Q01638 556 aa16.35■□□□□ 0.21
CDX1-202ENST00000616154 SNTB2Q13425 540 aaKnown RBP16.35■□□□□ 0.21
CDX1-202ENST00000616154 CCNIQ14094 377 aa16.35■□□□□ 0.21
CDX1-202ENST00000616154 DAG1Q14118 895 aa16.35■□□□□ 0.21
CDX1-202ENST00000616154 CR1LQ2VPA4 569 aa16.35■□□□□ 0.21
CDX1-202ENST00000616154 LRRC23Q53EV4 343 aaPredicted RBP16.35■□□□□ 0.21
CDX1-202ENST00000616154 PHYHD1Q5SRE7 291 aa16.35■□□□□ 0.21
CDX1-202ENST00000616154 CYP2R1Q6VVX0 501 aa16.35■□□□□ 0.21
CDX1-202ENST00000616154 NKAIN4Q8IVV8 208 aa16.35■□□□□ 0.21
CDX1-202ENST00000616154 CDK20Q8IZL9 346 aa16.35■□□□□ 0.21
CDX1-202ENST00000616154 ZCCHC24Q8N2G6 241 aaKnown RBP16.35■□□□□ 0.21
CDX1-202ENST00000616154 ZNF786Q8N393 782 aa16.35■□□□□ 0.21
CDX1-202ENST00000616154 C10orf53Q8N6V4 93 aa16.35■□□□□ 0.21
CDX1-202ENST00000616154 OR6X1Q8NH79 312 aa16.35■□□□□ 0.21
CDX1-202ENST00000616154 DUS3LQ96G46 650 aaKnown RBP16.35■□□□□ 0.21
CDX1-202ENST00000616154 TXNDC15Q96J42 360 aa16.35■□□□□ 0.21
CDX1-202ENST00000616154 DYNLRB1Q9NP97 96 aa16.35■□□□□ 0.21
CDX1-202ENST00000616154 B3GNT2Q9NY97 397 aa16.35■□□□□ 0.21
CDX1-202ENST00000616154 RIMS3Q9UJD0 308 aa16.35■□□□□ 0.21
CDX1-202ENST00000616154 RPS6KA6Q9UK32 745 aa16.35■□□□□ 0.21
CDX1-202ENST00000616154 SAMD4AQ9UPU9 718 aaKnown RBP16.35■□□□□ 0.21
CDX1-202ENST00000616154 HTR3EA5X5Y0 456 aa16.34■□□□□ 0.21
CDX1-202ENST00000616154 M0R3G1 203 aa16.34■□□□□ 0.21
CDX1-202ENST00000616154 LILRA1O75019 489 aa16.34■□□□□ 0.21
CDX1-202ENST00000616154 SEC14L2O76054 403 aa16.34■□□□□ 0.21
CDX1-202ENST00000616154 SEMG1P04279 462 aa16.34■□□□□ 0.21
CDX1-202ENST00000616154 ADORA3P0DMS8 318 aa16.34■□□□□ 0.21
CDX1-202ENST00000616154 OR1E2P47887 323 aa16.34■□□□□ 0.21
CDX1-202ENST00000616154 UGT2B15P54855 530 aa16.34■□□□□ 0.21
CDX1-202ENST00000616154 TAS2R41P59536 307 aa16.34■□□□□ 0.21
CDX1-202ENST00000616154 SRSF2Q01130 221 aaKnown RBP16.34■□□□□ 0.21
CDX1-202ENST00000616154 PIN1Q13526 163 aaPredicted RBP16.34■□□□□ 0.21
CDX1-202ENST00000616154 DEF8Q6ZN54 512 aa16.34■□□□□ 0.21
CDX1-202ENST00000616154 FAM86B1Q8N7N1 296 aa16.34■□□□□ 0.21
CDX1-202ENST00000616154 PRRC1Q96M27 445 aa16.34■□□□□ 0.21
CDX1-202ENST00000616154 EMC6Q9BV81 110 aa16.34■□□□□ 0.21
CDX1-202ENST00000616154 A4GNTQ9UNA3 340 aa16.34■□□□□ 0.21
CDX1-202ENST00000616154 HLA-HP01893 362 aa16.33■□□□□ 0.2
CDX1-202ENST00000616154 UMPSP11172 480 aa16.33■□□□□ 0.2
CDX1-202ENST00000616154 NR4A1P22736 598 aa16.33■□□□□ 0.2
CDX1-202ENST00000616154 AHCYP23526 432 aa16.33■□□□□ 0.2
CDX1-202ENST00000616154 RIN1Q13671 783 aa16.33■□□□□ 0.2
CDX1-202ENST00000616154 KPNB1Q14974 876 aaKnown RBP16.33■□□□□ 0.2
CDX1-202ENST00000616154 KRT80Q6KB66 452 aa16.33■□□□□ 0.2
CDX1-202ENST00000616154 ADGRG5Q8IZF4 528 aa16.33■□□□□ 0.2
CDX1-202ENST00000616154 LRRC17Q8N6Y2 441 aa16.33■□□□□ 0.2
CDX1-202ENST00000616154 UBASH3BQ8TF42 649 aa16.33■□□□□ 0.2
CDX1-202ENST00000616154 TMEM255BQ8WV15 326 aa16.33■□□□□ 0.2
CDX1-202ENST00000616154 TMEM239Q8WW34 195 aa16.33■□□□□ 0.2
CDX1-202ENST00000616154 LZICQ8WZA0 190 aa16.33■□□□□ 0.2
CDX1-202ENST00000616154 TMEM54Q969K7 222 aa16.33■□□□□ 0.2
CDX1-202ENST00000616154 LRGUKQ96M69 825 aa16.33■□□□□ 0.2
CDX1-202ENST00000616154 SEPHS2Q99611 448 aa16.33■□□□□ 0.2
CDX1-202ENST00000616154 B3GAT2Q9NPZ5 323 aa16.33■□□□□ 0.2
CDX1-202ENST00000616154 CMAHPQ9Y471 501 aa16.33■□□□□ 0.2
CDX1-202ENST00000616154 NPIPB13A6NJU9 1138 aa16.32■□□□□ 0.2
CDX1-202ENST00000616154 NPIPB4C9JG80 1138 aa16.32■□□□□ 0.2
CDX1-202ENST00000616154 KPNA4O00629 521 aaPredicted RBP16.32■□□□□ 0.2
CDX1-202ENST00000616154 OR7A10O76100 309 aa16.32■□□□□ 0.2
CDX1-202ENST00000616154 ADRA2AP08913 450 aa16.32■□□□□ 0.2
CDX1-202ENST00000616154 IFNGR1P15260 489 aa16.32■□□□□ 0.2
CDX1-202ENST00000616154 HOXB6P17509 224 aaKnown RBP16.32■□□□□ 0.2
CDX1-202ENST00000616154 APEX1P27695 318 aaKnown RBP16.32■□□□□ 0.2
CDX1-202ENST00000616154 IL2RGP31785 369 aa16.32■□□□□ 0.2
CDX1-202ENST00000616154 EVX1P49640 407 aa16.32■□□□□ 0.2
CDX1-202ENST00000616154 GSG1Q2KHT4 349 aa16.32■□□□□ 0.2
CDX1-202ENST00000616154 CARD17Q5XLA6 110 aa16.32■□□□□ 0.2
CDX1-202ENST00000616154 SLC35D2Q76EJ3 337 aa16.32■□□□□ 0.2
CDX1-202ENST00000616154 OFCC1Q8IZS5 231 aa16.32■□□□□ 0.2
CDX1-202ENST00000616154 LINC01356Q8N9X3 169 aa16.32■□□□□ 0.2
CDX1-202ENST00000616154 MRPL24Q96A35 216 aaKnown RBP16.32■□□□□ 0.2
CDX1-202ENST00000616154 C1orf159Q96HA4 380 aa16.32■□□□□ 0.2
CDX1-202ENST00000616154 PYURFQ96I23 114 aa16.32■□□□□ 0.2
CDX1-202ENST00000616154 ZNF75AQ96N20 296 aa16.32■□□□□ 0.2
CDX1-202ENST00000616154 MAGIXQ9H6Y5 334 aa16.32■□□□□ 0.2
CDX1-202ENST00000616154 SH3PXD2BA1X283 911 aa16.31■□□□□ 0.2
CDX1-202ENST00000616154 ZNF726A6NNF4 738 aa16.31■□□□□ 0.2
CDX1-202ENST00000616154 CENPBD1B2RD01 187 aa16.31■□□□□ 0.2
CDX1-202ENST00000616154 OR6A2O95222 327 aa16.31■□□□□ 0.2
CDX1-202ENST00000616154 CD79AP11912 226 aa16.31■□□□□ 0.2
CDX1-202ENST00000616154 ZNF35P13682 527 aa16.31■□□□□ 0.2
CDX1-202ENST00000616154 ZNF14P17017 642 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms