RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 TMEM139Q8IV31 216 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 OR1J1Q8NGS3 322 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 PPIL3Q9H2H8 161 aaKnown RBP11.67□□□□□ -0.54
TCF4-248ENST00000616053 MED9Q9NWA0 146 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 ACP2P11117 423 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 TAS2R19P59542 299 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 GAMTQ14353 236 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 HNRNPA1L2Q32P51 320 aaKnown RBP11.67□□□□□ -0.54
TCF4-248ENST00000616053 AMMECR1LQ6DCA0 310 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 FA2HQ7L5A8 372 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 LPAR2Q9HBW0 351 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 FABP7O15540 132 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 EPOP01588 193 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 ANKRD34CP0C6C1 535 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 GABARAPL2P60520 117 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 FAM71CQ8NEG0 241 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 OR4K5Q8NGD3 323 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 OR2A1Q8NGT9 310 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 ANGPTL6Q8NI99 470 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 DNAJC19Q96DA6 116 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 FAM103A1Q9BTL3 118 aaKnown RBP11.67□□□□□ -0.54
TCF4-248ENST00000616053 C5orf52A6NGY3 159 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 AOAHP28039 575 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 RPS27LQ71UM5 84 aaKnown RBP11.66□□□□□ -0.54
TCF4-248ENST00000616053 PHF7Q9BWX1 381 aaPredicted RBP11.66□□□□□ -0.54
TCF4-248ENST00000616053 GYPBP06028 91 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 IZUMO4Q1ZYL8 232 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 DCTN6O00399 190 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 TGFB1I1O43294 461 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 SEMA7AO75326 666 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 IMPA1P29218 277 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 NPY4RP50391 375 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 WDR5P61964 334 aaKnown RBP11.66□□□□□ -0.54
TCF4-248ENST00000616053 PCK2Q16822 640 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 DTWD2Q8NBA8 298 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 MRPL37Q9BZE1 423 aaKnown RBP11.66□□□□□ -0.54
TCF4-248ENST00000616053 NRSN2Q9GZP1 204 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 SEC16AO15027 2179 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 BMPR1BO00238 502 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 PRRX1P54821 245 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 GSG1Q2KHT4 349 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 SIGIRRQ6IA17 410 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 CLEC2AQ6UVW9 174 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 BORCS6Q96GS4 357 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 WDR61Q9GZS3 305 aaKnown RBP11.66□□□□□ -0.54
TCF4-248ENST00000616053 L2HGDHQ9H9P8 463 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 A0A1B0GX78 115 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 M0R3H8 397 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 S100A8P05109 93 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 IL7P13232 177 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 OR2I1PQ8NGU4 316 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 UBALD1Q8TB05 177 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 PTDSS2Q9BVG9 487 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 V9GY05 133 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 DOCK9Q9BZ29 2069 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 SMAD7O15105 426 aaKnown RBP11.66□□□□□ -0.54
TCF4-248ENST00000616053 VNN1O95497 513 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 THSD4Q6ZMP0 1018 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 PTRH1Q86Y79 214 aaKnown RBP11.66□□□□□ -0.54
TCF4-248ENST00000616053 MAML2Q8IZL2 1156 aaPredicted RBP11.66□□□□□ -0.54
TCF4-248ENST00000616053 MUL1Q969V5 352 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 HSD17B10Q99714 261 aaKnown RBP11.66□□□□□ -0.54
TCF4-248ENST00000616053 ADGRB3O60242 1522 aa11.66□□□□□ -0.54
TCF4-248ENST00000616053 CD3EP07766 207 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 ERVPABLB-1P60509 514 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 RELBQ01201 579 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 RING1Q06587 406 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 TMEM267Q0VDI3 215 aaPredicted RBP11.65□□□□□ -0.54
TCF4-248ENST00000616053 CRELD2Q6UXH1 353 aaPredicted RBP11.65□□□□□ -0.54
TCF4-248ENST00000616053 NLKQ9UBE8 527 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 TLCD2A6NGC4 264 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 ADIPOQQ15848 244 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 Q3ZCU0 254 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 NADK2Q4G0N4 442 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 PIP5KL1Q5T9C9 394 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 OR52L2PQ8NGH6 319 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 SLC23A1Q9UHI7 598 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 HPGDSO60760 199 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 CD27P26842 260 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 ZNF133P52736 654 aaPredicted RBP11.65□□□□□ -0.54
TCF4-248ENST00000616053 ACSM5Q6NUN0 579 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 SCGB1D4Q6XE38 83 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 REC114Q7Z4M0 266 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 SGK494Q96LW2 274 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 OR2J1Q9GZK6 312 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 GABARAPL1Q9H0R8 117 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 HLCSP50747 726 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 MARCH8Q5T0T0 291 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 UBE3DQ7Z6J8 389 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 LINC00052Q96N35 136 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 ZNF318Q5VUA4 2279 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 CROCC2H7BZ55 1655 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 TRAV17A0A0B4J275 112 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 H0YGG7 62 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 SYT5O00445 386 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 MYF6P23409 242 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 KCNAB2Q13303 367 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 SMIM21Q3B7S5 101 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 FAM162BQ5T6X4 162 aa11.65□□□□□ -0.54
TCF4-248ENST00000616053 SLC35D2Q76EJ3 337 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms