RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 SUSD4Q5VX71 490 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 FBXO46Q6PJ61 603 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-213ENST00000613099 OR6N1Q8NGY5 312 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 CMTM2Q8TAZ6 248 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 GHSRQ92847 366 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 HMCESQ96FZ2 354 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 ZPBPQ9BS86 351 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 NSUN3Q9H649 340 aaKnown RBP4.58□□□□□ -1.68
VPS13D-213ENST00000613099 MBNL1Q9NR56 388 aaKnown RBP4.58□□□□□ -1.68
VPS13D-213ENST00000613099 GIMAP2Q9UG22 337 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 WASHC3Q9Y3C0 194 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 YDJCA8MPS7 323 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 ADAP1O75689 374 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 GASTP01350 101 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 SFTPDP35247 375 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 CSNK1A1P48729 337 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 CXCR3P49682 368 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 TAZQ16635 292 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 STUMQ69YW2 141 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 OR52L2PQ8NGH6 319 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 TMEM106AQ96A25 262 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 SLC35E1Q96K37 410 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 MIEN1Q9BRT3 115 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 SMIM3Q9BZL3 60 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 TMEM100Q9NV29 134 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-213ENST00000613099 ZNF593O00488 134 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-213ENST00000613099 PAGE1O75459 146 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 ACTR1BP42025 376 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 HOXC5Q00444 222 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 SP3Q02447 781 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 TMEM151BQ8IW70 566 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 SLC26A10Q8NG04 563 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 OR2AE1Q8NHA4 323 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 ABHD16BQ9H3Z7 469 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 GSTO2Q9H4Y5 243 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 SLAMF8Q9P0V8 285 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 NTMQ9P121 344 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 ASB1Q9Y576 335 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 MDFIC2A0A1B0GVS7 189 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 LOC730098B7Z3J9 87 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 PEX12O00623 359 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 NUDT21O43809 227 aaKnown RBP4.58□□□□□ -1.68
VPS13D-213ENST00000613099 KLK3P07288 261 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-213ENST00000613099 EDNRBP24530 442 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 SUCLG1P53597 346 aaKnown RBP4.58□□□□□ -1.68
VPS13D-213ENST00000613099 RGNQ15493 299 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 ARSJQ5FYB0 599 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-213ENST00000613099 LYRM7Q5U5X0 104 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 HLA-DQA1Q5Y7H0 255 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 OR4K13Q8NH42 304 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 FGGYQ96C11 551 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 TMPRSS4Q9NRS4 437 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 AMDHD2Q9Y303 409 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 COL24A1Q17RW2 1714 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 E5RGE8 158 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 USP2O75604 605 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-213ENST00000613099 KCNK5O95279 499 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 ABHD16AO95870 558 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 CSNK2A2P19784 350 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-213ENST00000613099 SIRPAP78324 504 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 TEPSINQ96N21 525 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 GSX1Q9H4S2 264 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-213ENST00000613099 ADARB2Q9NS39 739 aaKnown RBP4.58□□□□□ -1.68
VPS13D-213ENST00000613099 RAB22AQ9UL26 194 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 NSG2Q9Y328 171 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 C7orf66A4D0T2 115 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 FAM227AF5H4B4 570 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 M0R2N6 131 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 SLC16A5O15375 505 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 PLA2G10O15496 165 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 PDE6DO43924 150 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 MAS1P04201 325 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 TMIGD3P0DMS9 266 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-213ENST00000613099 ARAFP10398 606 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 BACE1P56817 501 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 SELENOVP59797 346 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 EFEMP1Q12805 493 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 C1orf185Q5T7R7 199 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 OOSP2Q86WS3 158 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 OR10P1Q8NGE3 313 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 HDAC8Q9BY41 377 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 DNAJC4Q9NNZ3 241 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 AK3Q9UIJ7 227 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 B3GALT1Q9Y5Z6 326 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 SOCS7O14512 581 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 SLC35G6P0C7Q6 338 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 UBE2MP61081 183 aaKnown RBP4.58□□□□□ -1.68
VPS13D-213ENST00000613099 TXNRD3NBQ6F5E7 133 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 PRR22Q8IZ63 422 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 SLC25A44Q96H78 314 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-213ENST00000613099 IKZF4Q9H2S9 585 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 MEIS3P1A6NDR6 274 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 THPOP40225 353 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 NPBWR2P48146 333 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 SOX2P48431 317 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 ACTR1AP61163 376 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 DLEU7Q6UYE1 221 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 CPXM2Q8N436 756 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 NICN1Q9BSH3 213 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms