RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 IPCEF1Q8WWN9 437 aaPredicted RBP19.83■□□□□ 0.77
MMP28-203ENST00000612672 C11orf40Q8WZ69 217 aa19.83■□□□□ 0.77
MMP28-203ENST00000612672 CCL17Q92583 94 aa19.83■□□□□ 0.77
MMP28-203ENST00000612672 PAIP2Q9BPZ3 127 aaKnown RBP19.83■□□□□ 0.77
MMP28-203ENST00000612672 UBAP1Q9NZ09 502 aa19.83■□□□□ 0.77
MMP28-203ENST00000612672 GPR160Q9UJ42 338 aa19.83■□□□□ 0.77
MMP28-203ENST00000612672 SOX21Q9Y651 276 aaPredicted RBP19.83■□□□□ 0.77
MMP28-203ENST00000612672 TRPC5OSA6NMA1 111 aa19.82■□□□□ 0.76
MMP28-203ENST00000612672 SPRY3O43610 288 aa19.82■□□□□ 0.76
MMP28-203ENST00000612672 GATA3P23771 443 aa19.82■□□□□ 0.76
MMP28-203ENST00000612672 FPR2P25090 351 aa19.82■□□□□ 0.76
MMP28-203ENST00000612672 ZNF81P51508 661 aa19.82■□□□□ 0.76
MMP28-203ENST00000612672 SELENOVP59797 346 aa19.82■□□□□ 0.76
MMP28-203ENST00000612672 NCALDP61601 193 aa19.82■□□□□ 0.76
MMP28-203ENST00000612672 NPTX1Q15818 432 aa19.82■□□□□ 0.76
MMP28-203ENST00000612672 TBC1D28Q2M2D7 210 aa19.82■□□□□ 0.76
MMP28-203ENST00000612672 MIDNQ504T8 468 aa19.82■□□□□ 0.76
MMP28-203ENST00000612672 GCNT6Q5T4J0 391 aa19.82■□□□□ 0.76
MMP28-203ENST00000612672 TMEM53Q6P2H8 277 aa19.82■□□□□ 0.76
MMP28-203ENST00000612672 OR1J1Q8NGS3 322 aa19.82■□□□□ 0.76
MMP28-203ENST00000612672 RAB1CQ92928 201 aa19.82■□□□□ 0.76
MMP28-203ENST00000612672 RNF121Q9H920 327 aa19.82■□□□□ 0.76
MMP28-203ENST00000612672 TMEM27Q9HBJ8 222 aa19.82■□□□□ 0.76
MMP28-203ENST00000612672 NPHS2Q9NP85 383 aa19.82■□□□□ 0.76
MMP28-203ENST00000612672 TRAPPC2LH3BP13 241 aa19.81■□□□□ 0.76
MMP28-203ENST00000612672 M0R3H8 397 aa19.81■□□□□ 0.76
MMP28-203ENST00000612672 QDPRP09417 244 aa19.81■□□□□ 0.76
MMP28-203ENST00000612672 AQP1P29972 269 aa19.81■□□□□ 0.76
MMP28-203ENST00000612672 SEC61A1P61619 476 aaKnown RBP19.81■□□□□ 0.76
MMP28-203ENST00000612672 CDK6Q00534 326 aa19.81■□□□□ 0.76
MMP28-203ENST00000612672 ZNF74Q16587 644 aa19.81■□□□□ 0.76
MMP28-203ENST00000612672 REEP3Q6NUK4 255 aa19.81■□□□□ 0.76
MMP28-203ENST00000612672 SLC16A14Q7RTX9 510 aa19.81■□□□□ 0.76
MMP28-203ENST00000612672 GEMIN6Q8WXD5 167 aaKnown RBP19.81■□□□□ 0.76
MMP28-203ENST00000612672 ZNF566Q969W8 418 aa19.81■□□□□ 0.76
MMP28-203ENST00000612672 ELMOD3Q96FG2 381 aa19.81■□□□□ 0.76
MMP28-203ENST00000612672 SLC25A44Q96H78 314 aaPredicted RBP19.81■□□□□ 0.76
MMP28-203ENST00000612672 ZNF347Q96SE7 839 aa19.81■□□□□ 0.76
MMP28-203ENST00000612672 BCL2L14Q9BZR8 327 aa19.81■□□□□ 0.76
MMP28-203ENST00000612672 KCNK9Q9NPC2 374 aa19.81■□□□□ 0.76
MMP28-203ENST00000612672 TRIM33Q9UPN9 1127 aa19.81■□□□□ 0.76
MMP28-203ENST00000612672 ISPDA4D126 451 aa19.8■□□□□ 0.76
MMP28-203ENST00000612672 MT-ATP6P00846 226 aa19.8■□□□□ 0.76
MMP28-203ENST00000612672 RETREG3Q86VR2 466 aa19.8■□□□□ 0.76
MMP28-203ENST00000612672 LRRC18Q8N456 261 aa19.8■□□□□ 0.76
MMP28-203ENST00000612672 ANKRD42Q8N9B4 389 aa19.8■□□□□ 0.76
MMP28-203ENST00000612672 TIMD4Q96H15 378 aa19.8■□□□□ 0.76
MMP28-203ENST00000612672 RAD21L1Q9H4I0 556 aa19.8■□□□□ 0.76
MMP28-203ENST00000612672 SELENONQ9NZV5 590 aa19.8■□□□□ 0.76
MMP28-203ENST00000612672 CH25HO95992 272 aa19.79■□□□□ 0.76
MMP28-203ENST00000612672 HIST3H3Q16695 136 aa19.79■□□□□ 0.76
MMP28-203ENST00000612672 FAM209AQ5JX71 171 aa19.79■□□□□ 0.76
MMP28-203ENST00000612672 THEM4Q5T1C6 240 aa19.79■□□□□ 0.76
MMP28-203ENST00000612672 LRIF1Q5T3J3 769 aa19.79■□□□□ 0.76
MMP28-203ENST00000612672 SMYD1Q8NB12 490 aa19.79■□□□□ 0.76
MMP28-203ENST00000612672 RBM15BQ8NDT2 890 aaKnown RBP19.79■□□□□ 0.76
MMP28-203ENST00000612672 OR4D11Q8NGI4 311 aa19.79■□□□□ 0.76
MMP28-203ENST00000612672 MCHR2Q969V1 340 aa19.79■□□□□ 0.76
MMP28-203ENST00000612672 MARS2Q96GW9 593 aaKnown RBP19.79■□□□□ 0.76
MMP28-203ENST00000612672 C1orf198Q9H425 327 aa19.79■□□□□ 0.76
MMP28-203ENST00000612672 VAPAQ9P0L0 249 aa19.79■□□□□ 0.76
MMP28-203ENST00000612672 PURGQ9UJV8 347 aaKnown RBP19.79■□□□□ 0.76
MMP28-203ENST00000612672 NUP50Q9UKX7 468 aa19.79■□□□□ 0.76
MMP28-203ENST00000612672 TRBV5-3A0A0A0MS03 114 aa19.78■□□□□ 0.76
MMP28-203ENST00000612672 UBDO15205 165 aa19.78■□□□□ 0.76
MMP28-203ENST00000612672 RNF13O43567 381 aa19.78■□□□□ 0.76
MMP28-203ENST00000612672 FARS2O95363 451 aaKnown RBP19.78■□□□□ 0.76
MMP28-203ENST00000612672 IGHV2-70P01814 119 aa19.78■□□□□ 0.76
MMP28-203ENST00000612672 DRD4P21917 467 aa19.78■□□□□ 0.76
MMP28-203ENST00000612672 SCARB2Q14108 478 aa19.78■□□□□ 0.76
MMP28-203ENST00000612672 SLC36A2Q495M3 483 aa19.78■□□□□ 0.76
MMP28-203ENST00000612672 PABPC1L2AQ5JQF8 200 aa19.78■□□□□ 0.76
MMP28-203ENST00000612672 PAGE3Q5JUK9 113 aa19.78■□□□□ 0.76
MMP28-203ENST00000612672 CEP85LQ5SZL2 805 aa19.78■□□□□ 0.76
MMP28-203ENST00000612672 SWT1Q5T5J6 900 aaKnown RBP19.78■□□□□ 0.76
MMP28-203ENST00000612672 RFPL4BQ6ZWI9 263 aa19.78■□□□□ 0.76
MMP28-203ENST00000612672 RBM45Q8IUH3 476 aaKnown RBP19.78■□□□□ 0.76
MMP28-203ENST00000612672 FUNDC1Q8IVP5 155 aa19.78■□□□□ 0.76
MMP28-203ENST00000612672 GOLGA6L1Q8N7Z2 621 aa19.78■□□□□ 0.76
MMP28-203ENST00000612672 MCHR1Q99705 422 aa19.78■□□□□ 0.76
MMP28-203ENST00000612672 ARHGDIGQ99819 225 aa19.78■□□□□ 0.76
MMP28-203ENST00000612672 THAP1Q9NVV9 213 aa19.78■□□□□ 0.76
MMP28-203ENST00000612672 LOC100509620A0A075B734 347 aa19.77■□□□□ 0.76
MMP28-203ENST00000612672 PPIAL4EA0A075B759 164 aa19.77■□□□□ 0.76
MMP28-203ENST00000612672 PPIAL4CA0A0B4J2A2 164 aa19.77■□□□□ 0.76
MMP28-203ENST00000612672 PPIAL4DF5H284 164 aa19.77■□□□□ 0.76
MMP28-203ENST00000612672 KPNA4O00629 521 aaPredicted RBP19.77■□□□□ 0.76
MMP28-203ENST00000612672 MGRN1O60291 552 aa19.77■□□□□ 0.76
MMP28-203ENST00000612672 RNASE1P07998 156 aaKnown RBP19.77■□□□□ 0.76
MMP28-203ENST00000612672 PPIAL4FP0DN26 164 aa19.77■□□□□ 0.76
MMP28-203ENST00000612672 MDKP21741 143 aaPredicted RBP19.77■□□□□ 0.76
MMP28-203ENST00000612672 CCNOP22674 350 aa19.77■□□□□ 0.76
MMP28-203ENST00000612672 SRSF4Q08170 494 aaKnown RBP19.77■□□□□ 0.76
MMP28-203ENST00000612672 ZNF154Q13106 437 aa19.77■□□□□ 0.76
MMP28-203ENST00000612672 BAMBIQ13145 260 aa19.77■□□□□ 0.76
MMP28-203ENST00000612672 ARMCX4Q5H9R4 360 aa19.77■□□□□ 0.76
MMP28-203ENST00000612672 HHATQ5VTY9 493 aa19.77■□□□□ 0.76
MMP28-203ENST00000612672 JAZF1Q86VZ6 243 aa19.77■□□□□ 0.76
MMP28-203ENST00000612672 KRT73Q86Y46 540 aa19.77■□□□□ 0.76
MMP28-203ENST00000612672 MREGQ8N565 214 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms