RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 PCGF1Q9BSM1 259 aa8.58□□□□□ -1.04
SSX3-204ENST00000612497 SLC19A3Q9BZV2 496 aa8.58□□□□□ -1.04
SSX3-204ENST00000612497 MSL2Q9HCI7 577 aa8.58□□□□□ -1.04
SSX3-204ENST00000612497 KIF17Q9P2E2 1029 aa8.58□□□□□ -1.04
SSX3-204ENST00000612497 MARCOQ9UEW3 520 aaPredicted RBP8.58□□□□□ -1.04
SSX3-204ENST00000612497 DCDC2Q9UHG0 476 aa8.58□□□□□ -1.04
SSX3-204ENST00000612497 PRDM4Q9UKN5 801 aa8.58□□□□□ -1.04
SSX3-204ENST00000612497 EMCNQ9ULC0 261 aa8.58□□□□□ -1.04
SSX3-204ENST00000612497 EXOC1LA0A1B0GW35 172 aa8.57□□□□□ -1.04
SSX3-204ENST00000612497 TMEM233B4DJY2 109 aa8.57□□□□□ -1.04
SSX3-204ENST00000612497 MS4A18H0YCH9 400 aa8.57□□□□□ -1.04
SSX3-204ENST00000612497 RNASET2O00584 256 aaKnown RBP8.57□□□□□ -1.04
SSX3-204ENST00000612497 SERPINI2O75830 405 aa8.57□□□□□ -1.04
SSX3-204ENST00000612497 FARS2O95363 451 aaKnown RBP8.57□□□□□ -1.04
SSX3-204ENST00000612497 SFTPBP07988 381 aa8.57□□□□□ -1.04
SSX3-204ENST00000612497 CRHR1P34998 444 aa8.57□□□□□ -1.04
SSX3-204ENST00000612497 APLNRP35414 380 aa8.57□□□□□ -1.04
SSX3-204ENST00000612497 CSNK1A1P48729 337 aa8.57□□□□□ -1.04
SSX3-204ENST00000612497 MS4A18Q3C1V0 323 aa8.57□□□□□ -1.04
SSX3-204ENST00000612497 SLC36A2Q495M3 483 aa8.57□□□□□ -1.04
SSX3-204ENST00000612497 ZMAT1Q5H9K5 638 aa8.57□□□□□ -1.04
SSX3-204ENST00000612497 FAM69AQ5T7M9 428 aa8.57□□□□□ -1.04
SSX3-204ENST00000612497 FOXB2Q5VYV0 432 aa8.57□□□□□ -1.04
SSX3-204ENST00000612497 ZNF836Q6ZNA1 936 aa8.57□□□□□ -1.04
SSX3-204ENST00000612497 LRRC74BQ6ZQY2 392 aa8.57□□□□□ -1.04
SSX3-204ENST00000612497 VRK2Q86Y07 508 aa8.57□□□□□ -1.04
SSX3-204ENST00000612497 KLBQ86Z14 1044 aa8.57□□□□□ -1.04
SSX3-204ENST00000612497 C11orf44Q8N8P7 122 aa8.57□□□□□ -1.04
SSX3-204ENST00000612497 SLC25A40Q8TBP6 338 aa8.57□□□□□ -1.04
SSX3-204ENST00000612497 GATAD2BQ8WXI9 593 aa8.57□□□□□ -1.04
SSX3-204ENST00000612497 SLC35A5Q9BS91 424 aa8.57□□□□□ -1.04
SSX3-204ENST00000612497 TOR3AQ9H497 397 aa8.57□□□□□ -1.04
SSX3-204ENST00000612497 ACOXLQ9NUZ1 547 aa8.57□□□□□ -1.04
SSX3-204ENST00000612497 TMEM38BQ9NVV0 291 aa8.57□□□□□ -1.04
SSX3-204ENST00000612497 EIF3KQ9UBQ5 218 aaKnown RBP8.57□□□□□ -1.04
SSX3-204ENST00000612497 CGGBP1Q9UFW8 167 aaPredicted RBP8.57□□□□□ -1.04
SSX3-204ENST00000612497 DNAH9Q9NYC9 4486 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 RYR2Q92736 4967 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 A0A087WUV0 522 aaPredicted RBP8.56□□□□□ -1.04
SSX3-204ENST00000612497 K7EIL1 84 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 NPHS1O60500 1241 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 PROCP04070 461 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 NR2F1P10589 423 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 G6PDP11413 515 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 TNFRSF1AP19438 455 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 TNFSF4P23510 183 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 IER3P46695 156 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 CD69Q07108 199 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 NRN1LQ496H8 165 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 LIN52Q52LA3 116 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 XKR7Q5GH72 579 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 C6orf136Q5SQH8 315 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 ZNF774Q6NX45 483 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 SLC27A4Q6P1M0 643 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 SLC16A14Q7RTX9 510 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 NET1Q7Z628 596 aaPredicted RBP8.56□□□□□ -1.04
SSX3-204ENST00000612497 DPPA2Q7Z7J5 298 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 ZNF101Q8IZC7 436 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 FITM2Q8N6M3 262 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 CCDC63Q8NA47 563 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 RBM15BQ8NDT2 890 aaKnown RBP8.56□□□□□ -1.04
SSX3-204ENST00000612497 OR4K5Q8NGD3 323 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 OR52P1PQ8NH57 321 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 KLF14Q8TD94 323 aaPredicted RBP8.56□□□□□ -1.04
SSX3-204ENST00000612497 ACMSDQ8TDX5 336 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 SLC38A4Q969I6 547 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 DACT3Q96B18 629 aaPredicted RBP8.56□□□□□ -1.04
SSX3-204ENST00000612497 SIGLEC11Q96RL6 698 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 TRIM15Q9C019 465 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 OR2J1Q9GZK6 312 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 DPAGT1Q9H3H5 408 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 TMEM165Q9HC07 324 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 MIOXQ9UGB7 285 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 PPP1R3CQ9UQK1 317 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 TENM2Q9NT68 2774 aa8.56□□□□□ -1.04
SSX3-204ENST00000612497 A0A087WUJ7 227 aa8.55□□□□□ -1.04
SSX3-204ENST00000612497 CENPVL3A0A0U1RRI6 287 aa8.55□□□□□ -1.04
SSX3-204ENST00000612497 TMEM178BH3BS89 294 aa8.55□□□□□ -1.04
SSX3-204ENST00000612497 TIMM8AO60220 97 aaPredicted RBP8.55□□□□□ -1.04
SSX3-204ENST00000612497 FZD7O75084 574 aa8.55□□□□□ -1.04
SSX3-204ENST00000612497 TSPAN9O75954 239 aa8.55□□□□□ -1.04
SSX3-204ENST00000612497 ZNF205O95201 554 aa8.55□□□□□ -1.04
SSX3-204ENST00000612497 PPP1R3DO95685 299 aa8.55□□□□□ -1.04
SSX3-204ENST00000612497 C1QCP02747 245 aa8.55□□□□□ -1.04
SSX3-204ENST00000612497 CPA3P15088 417 aa8.55□□□□□ -1.04
SSX3-204ENST00000612497 AHCYP23526 432 aa8.55□□□□□ -1.04
SSX3-204ENST00000612497 CPT2P23786 658 aa8.55□□□□□ -1.04
SSX3-204ENST00000612497 ANXA11P50995 505 aaKnown RBP8.55□□□□□ -1.04
SSX3-204ENST00000612497 CLDN8P56748 225 aa8.55□□□□□ -1.04
SSX3-204ENST00000612497 COL10A1Q03692 680 aa8.55□□□□□ -1.04
SSX3-204ENST00000612497 HSF2Q03933 536 aa8.55□□□□□ -1.04
SSX3-204ENST00000612497 DOC2BQ14184 412 aa8.55□□□□□ -1.04
SSX3-204ENST00000612497 UGT3A2Q3SY77 523 aa8.55□□□□□ -1.04
SSX3-204ENST00000612497 COX20Q5RI15 118 aa8.55□□□□□ -1.04
SSX3-204ENST00000612497 MBNL2Q5VZF2 373 aaKnown RBP8.55□□□□□ -1.04
SSX3-204ENST00000612497 UNQ6126/PRO20091Q6UXV3 157 aa8.55□□□□□ -1.04
SSX3-204ENST00000612497 WDR88Q6ZMY6 472 aa8.55□□□□□ -1.04
SSX3-204ENST00000612497 VASH1Q7L8A9 365 aaPredicted RBP8.55□□□□□ -1.04
SSX3-204ENST00000612497 SERPINA11Q86U17 422 aa8.55□□□□□ -1.04
SSX3-204ENST00000612497 CLIP4Q8N3C7 705 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms