RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 C5orf67F2Z3F1 127 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 ICOSLGO75144 302 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 GLSO94925 669 aaPredicted RBP12.72□□□□□ -0.37
COL6A1-207ENST00000612273 MYF5P13349 255 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 NR0B1P51843 470 aaKnown RBP12.72□□□□□ -0.37
COL6A1-207ENST00000612273 CSRP2Q16527 193 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 GLYATL3Q5SZD4 288 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 C1orf189Q5VU69 101 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 CORO6Q6QEF8 472 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 BAIAP2L2Q6UXY1 529 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 TMUB2Q71RG4 321 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 GRAMD2AQ8IUY3 354 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 OR6M1Q8NGM8 313 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 ELSPBP1Q96BH3 223 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 NMNAT2Q9BZQ4 307 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 ZCCHC4Q9H5U6 513 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 NUP50Q9UKX7 468 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 hCG_1807616A0A1W2PRN6 198 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 EFCAB7A8K855 629 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 CDK2AP1O14519 115 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 RP2O75695 350 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 UTS2O95399 124 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 RENP00797 406 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 S100A11P31949 105 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 GGTLC2Q14390 218 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 ZNF141Q15928 474 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 ZNF626Q68DY1 528 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 WBP2NLQ6ICG8 309 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 Q6ZS52 159 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 KRT77Q7Z794 578 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 LRRTM1Q86UE6 522 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 ACBD4Q8NC06 268 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 FAM3DQ96BQ1 224 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 CMBLQ96DG6 245 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 MESP1Q9BRJ9 268 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 SDK2Q58EX2 2172 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 EML5Q05BV3 1969 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 PCNX3Q9H6A9 2034 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 GGT3PA6NGU5 568 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 ZNF264O43296 627 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 LMX1BO60663 402 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 PRAF2O60831 178 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 PLATP00750 562 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 AMY2AP04746 511 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 RAB40ALP0C0E4 278 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 KIR3DL2P43630 455 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 AKR1C2P52895 323 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 ADAM8P78325 824 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 AKR1C1Q04828 323 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 EXOSC6Q5RKV6 272 aaKnown RBP12.72□□□□□ -0.37
COL6A1-207ENST00000612273 RAB40AQ8WXH6 277 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 TOE1Q96GM8 510 aaKnown RBP12.72□□□□□ -0.37
COL6A1-207ENST00000612273 LMF2Q9BU23 707 aaKnown RBP12.72□□□□□ -0.37
COL6A1-207ENST00000612273 PDCD10Q9BUL8 212 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 MFFQ9GZY8 342 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 OPN4Q9UHM6 478 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 PLEKHA6Q9Y2H5 1048 aa12.72□□□□□ -0.37
COL6A1-207ENST00000612273 PCP4L1A6NKN8 68 aa12.71□□□□□ -0.37
COL6A1-207ENST00000612273 F5H5P2 479 aa12.71□□□□□ -0.37
COL6A1-207ENST00000612273 H0YIG0 161 aa12.71□□□□□ -0.37
COL6A1-207ENST00000612273 CTDSPLO15194 276 aa12.71□□□□□ -0.37
COL6A1-207ENST00000612273 ALOX12BO75342 701 aa12.71□□□□□ -0.37
COL6A1-207ENST00000612273 CTAG2O75638 210 aa12.71□□□□□ -0.37
COL6A1-207ENST00000612273 SLC25A12O75746 678 aa12.71□□□□□ -0.37
COL6A1-207ENST00000612273 NMBP08949 121 aa12.71□□□□□ -0.37
COL6A1-207ENST00000612273 ALOX5APP20292 161 aa12.71□□□□□ -0.37
COL6A1-207ENST00000612273 PRSS3P35030 304 aa12.71□□□□□ -0.37
COL6A1-207ENST00000612273 RAP2BP61225 183 aa12.71□□□□□ -0.37
COL6A1-207ENST00000612273 VWA2Q5GFL6 755 aa12.71□□□□□ -0.37
COL6A1-207ENST00000612273 FAM122BQ7Z309 247 aa12.71□□□□□ -0.37
COL6A1-207ENST00000612273 CMIPQ8IY22 773 aa12.71□□□□□ -0.37
COL6A1-207ENST00000612273 CHST4Q8NCG5 386 aa12.71□□□□□ -0.37
COL6A1-207ENST00000612273 CASTOR1Q8WTX7 329 aa12.71□□□□□ -0.37
COL6A1-207ENST00000612273 NKX2-4Q9H2Z4 354 aa12.71□□□□□ -0.37
COL6A1-207ENST00000612273 UBQLN4Q9NRR5 601 aa12.71□□□□□ -0.37
COL6A1-207ENST00000612273 IGHV3-20A0A0C4DH32 117 aa12.71□□□□□ -0.38
COL6A1-207ENST00000612273 TMEM235A6NFC5 223 aa12.71□□□□□ -0.38
COL6A1-207ENST00000612273 NPIPB9F8W1W9 429 aa12.71□□□□□ -0.38
COL6A1-207ENST00000612273 RLN2P04090 185 aa12.71□□□□□ -0.38
COL6A1-207ENST00000612273 RAG2P55895 527 aa12.71□□□□□ -0.38
COL6A1-207ENST00000612273 MFGE8Q08431 387 aaPredicted RBP12.71□□□□□ -0.38
COL6A1-207ENST00000612273 EIF2B5Q13144 721 aaKnown RBP12.71□□□□□ -0.38
COL6A1-207ENST00000612273 RBMS2Q15434 407 aaKnown RBP12.71□□□□□ -0.38
COL6A1-207ENST00000612273 TAF13Q15543 124 aa12.71□□□□□ -0.38
COL6A1-207ENST00000612273 TMEM81Q6P7N7 255 aa12.71□□□□□ -0.38
COL6A1-207ENST00000612273 OR2AK2Q8NG84 335 aa12.71□□□□□ -0.38
COL6A1-207ENST00000612273 KLHL15Q96M94 604 aa12.71□□□□□ -0.38
COL6A1-207ENST00000612273 SPACA5Q96QH8 159 aa12.71□□□□□ -0.38
COL6A1-207ENST00000612273 SLC38A3Q99624 504 aa12.71□□□□□ -0.38
COL6A1-207ENST00000612273 GABRG3Q99928 467 aa12.71□□□□□ -0.38
COL6A1-207ENST00000612273 POFUT1Q9H488 388 aa12.71□□□□□ -0.38
COL6A1-207ENST00000612273 OBP2AQ9NY56 170 aa12.71□□□□□ -0.38
COL6A1-207ENST00000612273 TAS2R4Q9NYW5 299 aa12.71□□□□□ -0.38
COL6A1-207ENST00000612273 STEAP1Q9UHE8 339 aa12.71□□□□□ -0.38
COL6A1-207ENST00000612273 MUC22E2RYF6 1773 aaPredicted RBP12.7□□□□□ -0.38
COL6A1-207ENST00000612273 GIPP09681 153 aaPredicted RBP12.7□□□□□ -0.38
COL6A1-207ENST00000612273 GABRG2P18507 467 aa12.7□□□□□ -0.38
COL6A1-207ENST00000612273 MAPK3P27361 379 aaPredicted RBP12.7□□□□□ -0.38
COL6A1-207ENST00000612273 TNFRSF4P43489 277 aa12.7□□□□□ -0.38
COL6A1-207ENST00000612273 DLX5P56178 289 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms