RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 ZNF311Q5JNZ3 666 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 CLLU1OSQ5K130 101 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 NIPAL3Q6P499 406 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 C16orf54Q6UWD8 224 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 GLB1LQ6UWU2 654 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 TMPPEQ6ZT21 453 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 SLC24A5Q71RS6 500 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 OVCH1Q7RTY7 1134 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 PNLDC1Q8NA58 520 aaKnown RBP11.45□□□□□ -0.58
CTCFL-218ENST00000608440 OR1J1Q8NGS3 322 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 CASTOR1Q8WTX7 329 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 ASB17Q8WXJ9 295 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 SMIM8Q96KF7 97 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 EIF5A2Q9GZV4 153 aaKnown RBP11.45□□□□□ -0.58
CTCFL-218ENST00000608440 MTFP1Q9UDX5 166 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 IL36AQ9UHA7 158 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 KCNE5Q9UJ90 142 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 KCNG2Q9UJ96 466 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 PUS1Q9Y606 427 aaKnown RBP eCLIP11.45□□□□□ -0.58
CTCFL-218ENST00000608440 TBC1D3BA6NDS4 549 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 C5orf51A6NDU8 294 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 MSGN1A6NI15 193 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 ADAP1O75689 374 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 PTBP3O95758 552 aaKnown RBP11.44□□□□□ -0.58
CTCFL-218ENST00000608440 IL18BPO95998 194 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 TBC1D3HP0C7X1 549 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 FUT1P19526 365 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 SERPINF1P36955 418 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 TSFMP43897 325 aaKnown RBP11.44□□□□□ -0.58
CTCFL-218ENST00000608440 SNRPNP63162 240 aaKnown RBP11.44□□□□□ -0.58
CTCFL-218ENST00000608440 ZNF85Q03923 595 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 ZNF763Q0D2J5 394 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 NR0B2Q15466 257 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 UBE2V2Q15819 145 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 TBC1D3GQ6DHY5 549 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 TMEM220Q6QAJ8 160 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 DEGS2Q6QHC5 323 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 TAS1R1Q7RTX1 841 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 ZNF615Q8N8J6 731 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 OR2T33Q8NG76 320 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 CCDC74BQ96LY2 380 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 RIOK2Q9BVS4 552 aaKnown RBP11.44□□□□□ -0.58
CTCFL-218ENST00000608440 STEAP1Q9UHE8 339 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 HDGFL3Q9Y3E1 203 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 WIF1Q9Y5W5 379 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 SLCO1B1Q9Y6L6 691 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 A0A0G2JN53 185 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 SYNDIG1LA6NDD5 238 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 ZNF724A8MTY0 619 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 C9J4A7 227 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 TBX18O95935 607 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 CXCL1P09341 107 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 CSF1P09603 554 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 PSMB10P40306 273 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 SLC6A12P48065 614 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 TAS2R43P59537 309 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 PFN3P60673 137 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 Q6ZRG5 221 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 ZNF683Q8IZ20 524 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 GALNT16Q8N428 558 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 RNASE8Q8TDE3 154 aaKnown RBP11.44□□□□□ -0.58
CTCFL-218ENST00000608440 MRGPRX3Q96LB0 322 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 HIST1H2BLQ99880 126 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 TCEAL2Q9H3H9 227 aaPredicted RBP11.44□□□□□ -0.58
CTCFL-218ENST00000608440 LMAN1LQ9HAT1 526 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 IL17CQ9P0M4 197 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 ST6GALNAC2Q9UJ37 374 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 CRLS1Q9UJA2 301 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 NTNG1Q9Y2I2 539 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 TRBV2A0A0J9YWF9 115 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 TEX13DA0A0J9YY54 714 aaPredicted RBP11.44□□□□□ -0.58
CTCFL-218ENST00000608440 PIN1P1O15428 100 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 GLSO94925 669 aaPredicted RBP11.44□□□□□ -0.58
CTCFL-218ENST00000608440 DIRAS3O95661 229 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 TGFB1P01137 390 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 MMP7P09237 267 aaPredicted RBP11.44□□□□□ -0.58
CTCFL-218ENST00000608440 OR13C7P0DN81 318 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 HNF1AP20823 631 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 MAOAP21397 527 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 TBX4P57082 545 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 HSPB3Q12988 150 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 HMGN3Q15651 99 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 NKPD1Q17RQ9 610 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 TCTN1Q2MV58 587 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 DNLZQ5SXM8 178 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 STEAP1BQ6NZ63 245 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 VITQ6UXI7 678 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 OR13C2Q8NGS9 318 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 SAT2Q96F10 170 aaPredicted RBP11.44□□□□□ -0.58
CTCFL-218ENST00000608440 PRRC1Q96M27 445 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 CAMK1GQ96NX5 476 aa11.44□□□□□ -0.58
CTCFL-218ENST00000608440 NKX3-1Q99801 234 aaPredicted RBP11.44□□□□□ -0.58
CTCFL-218ENST00000608440 HMGN4O00479 90 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 EPPINO95925 133 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 PLGP00747 810 aaPredicted RBP11.43□□□□□ -0.58
CTCFL-218ENST00000608440 MBPP02686 304 aaPredicted RBP11.43□□□□□ -0.58
CTCFL-218ENST00000608440 GATMP50440 423 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 RPS11P62280 158 aaKnown RBP eCLIP11.43□□□□□ -0.58
CTCFL-218ENST00000608440 RBX1P62877 108 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 EFEMP1Q12805 493 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms