RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 PARGQ86W56 976 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 OR4S1Q8NGB4 309 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 OR4K17Q8NGC6 315 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 RSRP1Q9BUV0 290 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 ALG12Q9BV10 488 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 RHOFQ9HBH0 211 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 DOCK9Q9BZ29 2069 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 GATCO43716 136 aaKnown RBP11.29□□□□□ -0.6
CDCA3-212ENST00000604599 CDC40O60508 579 aaKnown RBP eCLIP11.29□□□□□ -0.6
CDCA3-212ENST00000604599 SRPX2O60687 465 aaPredicted RBP11.29□□□□□ -0.6
CDCA3-212ENST00000604599 RPS4Y1P22090 263 aaKnown RBP11.29□□□□□ -0.6
CDCA3-212ENST00000604599 VAMP1P23763 118 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 HSD17B2P37059 387 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 ZNF684Q5T5D7 378 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 C9orf131Q5VYM1 1079 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 SLC39A5Q6ZMH5 540 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 JAZF1Q86VZ6 243 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 LILRB2Q8N423 598 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 OR13C8Q8NGS7 320 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 HIST1H2BAQ96A08 127 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 FAM3DQ96BQ1 224 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 SEH1LQ96EE3 360 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 ZC3H10Q96K80 434 aaKnown RBP11.29□□□□□ -0.6
CDCA3-212ENST00000604599 TMEM100Q9NV29 134 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 VSIG4Q9Y279 399 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 ENTPD2Q9Y5L3 495 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 CSAG2Q9Y5P2 127 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 TRBV5-5A0A0J9YX44 114 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 C13orf42A0A1B0GVH6 325 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 POM121BA6NF01 834 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 CLN5O75503 358 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 EFEMP2O95967 443 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 CYB5AP00167 134 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 FOLR2P14207 255 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 ZNF14P17017 642 aaPredicted RBP11.29□□□□□ -0.6
CDCA3-212ENST00000604599 PBX2P40425 430 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 SKP1P63208 163 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 SRSF4Q08170 494 aaKnown RBP11.29□□□□□ -0.6
CDCA3-212ENST00000604599 MST1LQ2TV78 715 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 TMPPEQ6ZT21 453 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 MTSS1LQ765P7 747 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 TCEAL8Q8IYN2 117 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 IRF7Q92985 503 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 FOXRED1Q96CU9 486 aaPredicted RBP11.29□□□□□ -0.6
CDCA3-212ENST00000604599 ADAD1Q96M93 576 aaKnown RBP11.29□□□□□ -0.6
CDCA3-212ENST00000604599 SLC6A7Q99884 636 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 MICU1Q9BPX6 476 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 WDR77Q9BQA1 342 aaPredicted RBP11.29□□□□□ -0.6
CDCA3-212ENST00000604599 SGIP1Q9BQI5 828 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 CST11Q9H112 138 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 OR2S2Q9NQN1 319 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 SMCO4Q9NRQ5 59 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 WBP1LQ9NX94 342 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 PCDHGA1Q9Y5H4 931 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 TRPM6Q9BX84 2022 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.29□□□□□ -0.6
CDCA3-212ENST00000604599 C5orf51A6NDU8 294 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 ELOA3DA6NLF2 546 aaPredicted RBP11.29□□□□□ -0.6
CDCA3-212ENST00000604599 ZNF736B4DX44 427 aaPredicted RBP11.29□□□□□ -0.6
CDCA3-212ENST00000604599 VEGFDO43915 354 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 SOD2P04179 222 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 NQO2P16083 231 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 ELOA3BQ3SY89 546 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 LEG1Q6P5S2 330 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 SHISA5Q8N114 240 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 PLPP7Q8NBV4 271 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 ELOA3Q8NG57 546 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 ZNF417Q8TAU3 575 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 TSEN15Q8WW01 171 aaKnown RBP11.29□□□□□ -0.6
CDCA3-212ENST00000604599 ISOC2Q96AB3 205 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 MSRAQ9UJ68 235 aa11.29□□□□□ -0.6
CDCA3-212ENST00000604599 TVP23AA6NH52 213 aa11.28□□□□□ -0.6
CDCA3-212ENST00000604599 RDH16O75452 317 aa11.28□□□□□ -0.6
CDCA3-212ENST00000604599 MELTFP08582 738 aa11.28□□□□□ -0.6
CDCA3-212ENST00000604599 TACSTD2P09758 323 aa11.28□□□□□ -0.6
CDCA3-212ENST00000604599 PRF1P14222 555 aa11.28□□□□□ -0.6
CDCA3-212ENST00000604599 FLT3LGP49771 235 aa11.28□□□□□ -0.6
CDCA3-212ENST00000604599 CXADRP78310 365 aa11.28□□□□□ -0.6
CDCA3-212ENST00000604599 MLF2Q15773 248 aaPredicted RBP11.28□□□□□ -0.6
CDCA3-212ENST00000604599 LINC01590Q5TEZ4 76 aa11.28□□□□□ -0.6
CDCA3-212ENST00000604599 OTPQ5XKR4 325 aa11.28□□□□□ -0.6
CDCA3-212ENST00000604599 METRNLQ641Q3 311 aa11.28□□□□□ -0.6
CDCA3-212ENST00000604599 FAM219AQ8IW50 185 aa11.28□□□□□ -0.6
CDCA3-212ENST00000604599 PAQR4Q8N4S7 273 aaPredicted RBP11.28□□□□□ -0.6
CDCA3-212ENST00000604599 SLC30A7Q8NEW0 376 aa11.28□□□□□ -0.6
CDCA3-212ENST00000604599 MKI67P46013 3256 aaKnown RBP11.28□□□□□ -0.6
CDCA3-212ENST00000604599 ZNF735P0CB33 412 aa11.28□□□□□ -0.6
CDCA3-212ENST00000604599 FAM157CP0CG43 387 aa11.28□□□□□ -0.6
CDCA3-212ENST00000604599 PRKAR2AP13861 404 aaKnown RBP11.28□□□□□ -0.6
CDCA3-212ENST00000604599 CCKBRP32239 447 aa11.28□□□□□ -0.6
CDCA3-212ENST00000604599 RBM34P42696 430 aaKnown RBP11.28□□□□□ -0.6
CDCA3-212ENST00000604599 IL13RA1P78552 427 aa11.28□□□□□ -0.6
CDCA3-212ENST00000604599 CAP1Q01518 475 aa11.28□□□□□ -0.6
CDCA3-212ENST00000604599 RAB11BQ15907 218 aa11.28□□□□□ -0.6
CDCA3-212ENST00000604599 OR52W1Q6IF63 320 aa11.28□□□□□ -0.6
CDCA3-212ENST00000604599 IL34Q6ZMJ4 242 aa11.28□□□□□ -0.6
CDCA3-212ENST00000604599 ARRDC3Q96B67 414 aa11.28□□□□□ -0.6
CDCA3-212ENST00000604599 RRNAD1Q96FB5 475 aaKnown RBP11.28□□□□□ -0.6
CDCA3-212ENST00000604599 TCEAL7Q9BRU2 100 aa11.28□□□□□ -0.6
CDCA3-212ENST00000604599 CHMP1AQ9HD42 196 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms