RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 HLA-DQA2P01906 255 aa16.45■□□□□ 0.22
SSBP4-212ENST00000601919 CDK1P06493 297 aa16.45■□□□□ 0.22
SSBP4-212ENST00000601919 DCKP27707 260 aa16.45■□□□□ 0.22
SSBP4-212ENST00000601919 ZNF84P51523 738 aa16.45■□□□□ 0.22
SSBP4-212ENST00000601919 ZNF133P52736 654 aaPredicted RBP16.45■□□□□ 0.22
SSBP4-212ENST00000601919 FMODQ06828 376 aa16.45■□□□□ 0.22
SSBP4-212ENST00000601919 ST3GAL4Q11206 333 aa16.45■□□□□ 0.22
SSBP4-212ENST00000601919 C10orf128Q5T292 105 aa16.45■□□□□ 0.22
SSBP4-212ENST00000601919 SLC25A47Q6Q0C1 308 aa16.45■□□□□ 0.22
SSBP4-212ENST00000601919 FAM214BQ7L5A3 538 aa16.45■□□□□ 0.22
SSBP4-212ENST00000601919 PRSS48Q7RTY5 328 aa16.45■□□□□ 0.22
SSBP4-212ENST00000601919 ABHD12BQ7Z5M8 362 aaPredicted RBP16.45■□□□□ 0.22
SSBP4-212ENST00000601919 GLB1L2Q8IW92 636 aa16.45■□□□□ 0.22
SSBP4-212ENST00000601919 WDFY1Q8IWB7 410 aa16.45■□□□□ 0.22
SSBP4-212ENST00000601919 C9orf106Q8NAJ2 232 aa16.45■□□□□ 0.22
SSBP4-212ENST00000601919 OR51G2Q8NGK0 314 aa16.45■□□□□ 0.22
SSBP4-212ENST00000601919 KISS1RQ969F8 398 aaPredicted RBP16.45■□□□□ 0.22
SSBP4-212ENST00000601919 LGALS12Q96DT0 336 aa16.45■□□□□ 0.22
SSBP4-212ENST00000601919 ZMYND19Q96E35 227 aaPredicted RBP16.45■□□□□ 0.22
SSBP4-212ENST00000601919 TMEM80Q96HE8 168 aa16.45■□□□□ 0.22
SSBP4-212ENST00000601919 MYCBPQ99417 103 aaPredicted RBP16.45■□□□□ 0.22
SSBP4-212ENST00000601919 EXOGQ9Y2C4 368 aaKnown RBP16.45■□□□□ 0.22
SSBP4-212ENST00000601919 ZZEF1O43149 2961 aa16.44■□□□□ 0.22
SSBP4-212ENST00000601919 MYL12AP19105 171 aa16.44■□□□□ 0.22
SSBP4-212ENST00000601919 NTF4P34130 210 aa16.44■□□□□ 0.22
SSBP4-212ENST00000601919 STK11Q15831 433 aa16.44■□□□□ 0.22
SSBP4-212ENST00000601919 LINC01590Q5TEZ4 76 aa16.44■□□□□ 0.22
SSBP4-212ENST00000601919 RTL6Q6ICC9 239 aa16.44■□□□□ 0.22
SSBP4-212ENST00000601919 LRFN4Q6PJG9 635 aa16.44■□□□□ 0.22
SSBP4-212ENST00000601919 ZNF773Q6PK81 442 aa16.44■□□□□ 0.22
SSBP4-212ENST00000601919 DOLPP1Q86YN1 238 aa16.44■□□□□ 0.22
SSBP4-212ENST00000601919 NSMAFQ92636 917 aa16.44■□□□□ 0.22
SSBP4-212ENST00000601919 CCDC90BQ9GZT6 254 aa16.44■□□□□ 0.22
SSBP4-212ENST00000601919 VCX3AQ9NNX9 186 aa16.44■□□□□ 0.22
SSBP4-212ENST00000601919 FGF20Q9NP95 211 aaPredicted RBP16.44■□□□□ 0.22
SSBP4-212ENST00000601919 CHCHD3Q9NX63 227 aaKnown RBP16.44■□□□□ 0.22
SSBP4-212ENST00000601919 UPB1Q9UBR1 384 aa16.44■□□□□ 0.22
SSBP4-212ENST00000601919 SCOCQ9UIL1 159 aa16.44■□□□□ 0.22
SSBP4-212ENST00000601919 DIMT1Q9UNQ2 313 aaKnown RBP16.44■□□□□ 0.22
SSBP4-212ENST00000601919 COA3Q9Y2R0 106 aaPredicted RBP16.44■□□□□ 0.22
SSBP4-212ENST00000601919 FAM215AQ9Y5M1 114 aa16.44■□□□□ 0.22
SSBP4-212ENST00000601919 FAM171A2A8MVW0 826 aa16.43■□□□□ 0.22
SSBP4-212ENST00000601919 ZNF587BE7ETH6 402 aa16.43■□□□□ 0.22
SSBP4-212ENST00000601919 DHHO43323 396 aa16.43■□□□□ 0.22
SSBP4-212ENST00000601919 HRGP04196 525 aa16.43■□□□□ 0.22
SSBP4-212ENST00000601919 STSP08842 583 aa16.43■□□□□ 0.22
SSBP4-212ENST00000601919 SBK2P0C263 348 aa16.43■□□□□ 0.22
SSBP4-212ENST00000601919 LAP3P28838 519 aa16.43■□□□□ 0.22
SSBP4-212ENST00000601919 ACTC1P68032 377 aa16.43■□□□□ 0.22
SSBP4-212ENST00000601919 ACTA1P68133 377 aa16.43■□□□□ 0.22
SSBP4-212ENST00000601919 HSF2Q03933 536 aa16.43■□□□□ 0.22
SSBP4-212ENST00000601919 GUSBP1Q15486 140 aa16.43■□□□□ 0.22
SSBP4-212ENST00000601919 SVOPQ8N4V2 548 aa16.43■□□□□ 0.22
SSBP4-212ENST00000601919 CNEP1R1Q8N9A8 125 aa16.43■□□□□ 0.22
SSBP4-212ENST00000601919 OR52I1Q8NGK6 324 aa16.43■□□□□ 0.22
SSBP4-212ENST00000601919 OR6K3Q8NGY3 331 aa16.43■□□□□ 0.22
SSBP4-212ENST00000601919 INTS14Q96SY0 518 aa16.43■□□□□ 0.22
SSBP4-212ENST00000601919 MNTQ99583 582 aa16.43■□□□□ 0.22
SSBP4-212ENST00000601919 RBM24Q9BX46 236 aaKnown RBP16.43■□□□□ 0.22
SSBP4-212ENST00000601919 MRPS26Q9BYN8 205 aaKnown RBP16.43■□□□□ 0.22
SSBP4-212ENST00000601919 ADGRL4Q9HBW9 690 aa16.43■□□□□ 0.22
SSBP4-212ENST00000601919 INPP5EQ9NRR6 644 aa16.43■□□□□ 0.22
SSBP4-212ENST00000601919 PAK1IP1Q9NWT1 392 aaPredicted RBP16.43■□□□□ 0.22
SSBP4-212ENST00000601919 ERVK-18Q9QC07 812 aa16.43■□□□□ 0.22
SSBP4-212ENST00000601919 EXOSC1Q9Y3B2 195 aaKnown RBP16.43■□□□□ 0.22
SSBP4-212ENST00000601919 PHF3Q92576 2039 aaKnown RBP16.43■□□□□ 0.22
SSBP4-212ENST00000601919 PRRC2CQ9Y520 2896 aaKnown RBP16.42■□□□□ 0.22
SSBP4-212ENST00000601919 A0A1W2PPL8 197 aa16.42■□□□□ 0.22
SSBP4-212ENST00000601919 UPK3AO75631 287 aa16.42■□□□□ 0.22
SSBP4-212ENST00000601919 TMIGD3P0DMS9 266 aaPredicted RBP16.42■□□□□ 0.22
SSBP4-212ENST00000601919 ZNF823P16415 610 aa16.42■□□□□ 0.22
SSBP4-212ENST00000601919 OR3A2P47893 321 aa16.42■□□□□ 0.22
SSBP4-212ENST00000601919 TUBA4AP68366 448 aa16.42■□□□□ 0.22
SSBP4-212ENST00000601919 ETFDHQ16134 617 aa16.42■□□□□ 0.22
SSBP4-212ENST00000601919 RNLSQ5VYX0 342 aa16.42■□□□□ 0.22
SSBP4-212ENST00000601919 TMEM211Q6ICI0 200 aa16.42■□□□□ 0.22
SSBP4-212ENST00000601919 B3GLCTQ6Y288 498 aa16.42■□□□□ 0.22
SSBP4-212ENST00000601919 SLC16A9Q7RTY1 509 aa16.42■□□□□ 0.22
SSBP4-212ENST00000601919 NUFIP2Q7Z417 695 aaKnown RBP16.42■□□□□ 0.22
SSBP4-212ENST00000601919 ERI1Q8IV48 349 aaKnown RBP16.42■□□□□ 0.22
SSBP4-212ENST00000601919 GCNT2Q8N0V5 402 aa16.42■□□□□ 0.22
SSBP4-212ENST00000601919 UBE2J2Q8N2K1 259 aa16.42■□□□□ 0.22
SSBP4-212ENST00000601919 ACBD7Q8N6N7 88 aa16.42■□□□□ 0.22
SSBP4-212ENST00000601919 ZNF511Q8NB15 262 aa16.42■□□□□ 0.22
SSBP4-212ENST00000601919 OR10H5Q8NGA6 315 aa16.42■□□□□ 0.22
SSBP4-212ENST00000601919 MRPL48Q96GC5 212 aaKnown RBP16.42■□□□□ 0.22
SSBP4-212ENST00000601919 TTYH2Q9BSA4 534 aa16.42■□□□□ 0.22
SSBP4-212ENST00000601919 RHNO1Q9BSD3 238 aa16.42■□□□□ 0.22
SSBP4-212ENST00000601919 YIPF3Q9GZM5 350 aa16.42■□□□□ 0.22
SSBP4-212ENST00000601919 MARCH7Q9H992 704 aa16.42■□□□□ 0.22
SSBP4-212ENST00000601919 SEC61A2Q9H9S3 476 aa16.42■□□□□ 0.22
SSBP4-212ENST00000601919 KCNG2Q9UJ96 466 aa16.42■□□□□ 0.22
SSBP4-212ENST00000601919 COMMD3-BMI1R4GMX3 469 aa16.42■□□□□ 0.22
SSBP4-212ENST00000601919 USP24Q9UPU5 2620 aa16.42■□□□□ 0.22
SSBP4-212ENST00000601919 CACNA1BQ00975 2339 aa16.41■□□□□ 0.22
SSBP4-212ENST00000601919 TMCC2O75069 709 aa16.41■□□□□ 0.22
SSBP4-212ENST00000601919 CNOT4O95628 575 aaKnown RBP16.41■□□□□ 0.22
SSBP4-212ENST00000601919 MRPL3P09001 348 aaKnown RBP16.41■□□□□ 0.22
SSBP4-212ENST00000601919 OR2T7P0C7T2 308 aa16.41■□□□□ 0.22
SSBP4-212ENST00000601919 GLI4P10075 376 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms