RNA–Protein interactions for RNA: ENST00000600719.5

RAB11B-204, Transcript of RAB11B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB11B, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-204ENST00000600719 IGFBP2P18065 325 aa12.85□□□□□ -0.35
RAB11B-204ENST00000600719 SH3BGRP55822 239 aaPredicted RBP12.85□□□□□ -0.35
RAB11B-204ENST00000600719 ARF1P84077 181 aaKnown RBP12.85□□□□□ -0.35
RAB11B-204ENST00000600719 SORDQ00796 357 aa12.85□□□□□ -0.35
RAB11B-204ENST00000600719 DBPQ10586 325 aaPredicted RBP12.85□□□□□ -0.35
RAB11B-204ENST00000600719 CRMP1Q14194 572 aa12.85□□□□□ -0.35
RAB11B-204ENST00000600719 TSC22D1Q15714 1073 aa12.85□□□□□ -0.35
RAB11B-204ENST00000600719 GABRA6Q16445 453 aa12.85□□□□□ -0.35
RAB11B-204ENST00000600719 C9orf135Q5VTT2 229 aa12.85□□□□□ -0.35
RAB11B-204ENST00000600719 FOXL2NBQ6ZUU3 175 aa12.85□□□□□ -0.35
RAB11B-204ENST00000600719 ZBTB46Q86UZ6 589 aa12.85□□□□□ -0.35
RAB11B-204ENST00000600719 JAZF1Q86VZ6 243 aa12.85□□□□□ -0.35
RAB11B-204ENST00000600719 OR6V1Q8N148 313 aa12.85□□□□□ -0.35
RAB11B-204ENST00000600719 CYB561A3Q8NBI2 242 aa12.85□□□□□ -0.35
RAB11B-204ENST00000600719 C1orf162Q8NEQ5 155 aaPredicted RBP12.85□□□□□ -0.35
RAB11B-204ENST00000600719 OR1K1Q8NGR3 316 aa12.85□□□□□ -0.35
RAB11B-204ENST00000600719 BCL2L2Q92843 193 aaPredicted RBP12.85□□□□□ -0.35
RAB11B-204ENST00000600719 PTP4A1Q93096 173 aa12.85□□□□□ -0.35
RAB11B-204ENST00000600719 KISS1RQ969F8 398 aaPredicted RBP12.85□□□□□ -0.35
RAB11B-204ENST00000600719 LRRC46Q96FV0 321 aa12.85□□□□□ -0.35
RAB11B-204ENST00000600719 TSSK2Q96PF2 358 aa12.85□□□□□ -0.35
RAB11B-204ENST00000600719 NUAK2Q9H093 628 aa12.85□□□□□ -0.35
RAB11B-204ENST00000600719 OR10A4Q9H209 315 aa12.85□□□□□ -0.35
RAB11B-204ENST00000600719 NELFAQ9H3P2 528 aa12.85□□□□□ -0.35
RAB11B-204ENST00000600719 FAM118AQ9NWS6 357 aa12.85□□□□□ -0.35
RAB11B-204ENST00000600719 NDRG4Q9ULP0 352 aaKnown RBP12.85□□□□□ -0.35
RAB11B-204ENST00000600719 USP9YO00507 2555 aaPredicted RBP12.84□□□□□ -0.35
RAB11B-204ENST00000600719 IGLV1-36A0A0B4J1U3 117 aa12.84□□□□□ -0.35
RAB11B-204ENST00000600719 RIIAD1A6NNX1 92 aa12.84□□□□□ -0.35
RAB11B-204ENST00000600719 H0YJX3 145 aa12.84□□□□□ -0.35
RAB11B-204ENST00000600719 C19orf84I3L1E1 186 aa12.84□□□□□ -0.35
RAB11B-204ENST00000600719 SLC16A6O15403 523 aa12.84□□□□□ -0.35
RAB11B-204ENST00000600719 RENP00797 406 aa12.84□□□□□ -0.35
RAB11B-204ENST00000600719 IFNGP01579 166 aa12.84□□□□□ -0.35
RAB11B-204ENST00000600719 ZNF3P17036 446 aa12.84□□□□□ -0.35
RAB11B-204ENST00000600719 PTDSS1P48651 473 aaKnown RBP12.84□□□□□ -0.35
RAB11B-204ENST00000600719 SLC25A1P53007 311 aa12.84□□□□□ -0.35
RAB11B-204ENST00000600719 TGFBR3Q03167 851 aa12.84□□□□□ -0.35
RAB11B-204ENST00000600719 ETFDHQ16134 617 aa12.84□□□□□ -0.35
RAB11B-204ENST00000600719 FBXW10Q5XX13 1052 aa12.84□□□□□ -0.35
RAB11B-204ENST00000600719 ANKRD16Q6P6B7 361 aa12.84□□□□□ -0.35
RAB11B-204ENST00000600719 C22orf34Q6ZV56 151 aa12.84□□□□□ -0.35
RAB11B-204ENST00000600719 BHLHA15Q7RTS1 189 aaPredicted RBP12.84□□□□□ -0.35
RAB11B-204ENST00000600719 PITX2Q99697 317 aa12.84□□□□□ -0.35
RAB11B-204ENST00000600719 HCAR1Q9BXC0 346 aa12.84□□□□□ -0.35
RAB11B-204ENST00000600719 TEX12Q9BXU0 123 aa12.84□□□□□ -0.35
RAB11B-204ENST00000600719 RPRD1BQ9NQG5 326 aaKnown RBP12.84□□□□□ -0.35
RAB11B-204ENST00000600719 TMEM38BQ9NVV0 291 aa12.84□□□□□ -0.35
RAB11B-204ENST00000600719 TVP23BQ9NYZ1 205 aa12.84□□□□□ -0.35
RAB11B-204ENST00000600719 B9D1Q9UPM9 204 aa12.84□□□□□ -0.35
RAB11B-204ENST00000600719 PRKYO43930 277 aa12.83□□□□□ -0.36
RAB11B-204ENST00000600719 SLC16A7O60669 478 aa12.83□□□□□ -0.36
RAB11B-204ENST00000600719 RAD51DO75771 328 aa12.83□□□□□ -0.36
RAB11B-204ENST00000600719 GGT2P36268 569 aa12.83□□□□□ -0.36
RAB11B-204ENST00000600719 MRPS34P82930 218 aaKnown RBP12.83□□□□□ -0.36
RAB11B-204ENST00000600719 SNAPC1Q16533 368 aa12.83□□□□□ -0.36
RAB11B-204ENST00000600719 NRN1LQ496H8 165 aa12.83□□□□□ -0.36
RAB11B-204ENST00000600719 OR7E24Q6IFN5 339 aa12.83□□□□□ -0.36
RAB11B-204ENST00000600719 STEAP2Q8NFT2 490 aa12.83□□□□□ -0.36
RAB11B-204ENST00000600719 ZNRF4Q8WWF5 429 aa12.83□□□□□ -0.36
RAB11B-204ENST00000600719 NSMAFQ92636 917 aa12.83□□□□□ -0.36
RAB11B-204ENST00000600719 NABP1Q96AH0 204 aa12.83□□□□□ -0.36
RAB11B-204ENST00000600719 S100PBPQ96BU1 408 aa12.83□□□□□ -0.36
RAB11B-204ENST00000600719 PSMG3-AS1Q96PY0 264 aa12.83□□□□□ -0.36
RAB11B-204ENST00000600719 SLC38A2Q96QD8 506 aa12.83□□□□□ -0.36
RAB11B-204ENST00000600719 USB1Q9BQ65 265 aaKnown RBP12.83□□□□□ -0.36
RAB11B-204ENST00000600719 RACGAP1Q9H0H5 632 aa12.83□□□□□ -0.36
RAB11B-204ENST00000600719 FN3KQ9H479 309 aa12.83□□□□□ -0.36
RAB11B-204ENST00000600719 SRA1Q9HD15 236 aaKnown RBP12.83□□□□□ -0.36
RAB11B-204ENST00000600719 HINT3Q9NQE9 182 aaKnown RBP12.83□□□□□ -0.36
RAB11B-204ENST00000600719 FKBP7Q9Y680 259 aa12.83□□□□□ -0.36
RAB11B-204ENST00000600719 LOC100130705A0A1B0GUX0 176 aa12.82□□□□□ -0.36
RAB11B-204ENST00000600719 CIB4A0PJX0 185 aa12.82□□□□□ -0.36
RAB11B-204ENST00000600719 OR5H1A6NKK0 313 aa12.82□□□□□ -0.36
RAB11B-204ENST00000600719 FAM183AA6NL82 134 aa12.82□□□□□ -0.36
RAB11B-204ENST00000600719 M0R129 80 aa12.82□□□□□ -0.36
RAB11B-204ENST00000600719 KHDRBS3O75525 346 aaKnown RBP12.82□□□□□ -0.36
RAB11B-204ENST00000600719 SEC14L2O76054 403 aa12.82□□□□□ -0.36
RAB11B-204ENST00000600719 SPI1P17947 270 aa12.82□□□□□ -0.36
RAB11B-204ENST00000600719 IL32P24001 234 aa12.82□□□□□ -0.36
RAB11B-204ENST00000600719 CRABP1P29762 137 aa12.82□□□□□ -0.36
RAB11B-204ENST00000600719 CDAP32320 146 aa12.82□□□□□ -0.36
RAB11B-204ENST00000600719 ZNF84P51523 738 aa12.82□□□□□ -0.36
RAB11B-204ENST00000600719 ADARB1P78563 741 aaKnown RBP12.82□□□□□ -0.36
RAB11B-204ENST00000600719 HIKESHIQ53FT3 197 aa12.82□□□□□ -0.36
RAB11B-204ENST00000600719 P2RY8Q86VZ1 359 aa12.82□□□□□ -0.36
RAB11B-204ENST00000600719 CPOQ8IVL8 374 aa12.82□□□□□ -0.36
RAB11B-204ENST00000600719 C17orf78Q8N4C9 275 aa12.82□□□□□ -0.36
RAB11B-204ENST00000600719 WDR31Q8NA23 367 aa12.82□□□□□ -0.36
RAB11B-204ENST00000600719 FOXB1Q99853 325 aa12.82□□□□□ -0.36
RAB11B-204ENST00000600719 PRRG3Q9BZD7 231 aa12.82□□□□□ -0.36
RAB11B-204ENST00000600719 ACTR6Q9GZN1 396 aa12.82□□□□□ -0.36
RAB11B-204ENST00000600719 VCXQ9H320 206 aa12.82□□□□□ -0.36
RAB11B-204ENST00000600719 MED20Q9H944 212 aa12.82□□□□□ -0.36
RAB11B-204ENST00000600719 COA3Q9Y2R0 106 aaPredicted RBP12.82□□□□□ -0.36
RAB11B-204ENST00000600719 SPTAN1Q13813 2472 aaKnown RBP12.81□□□□□ -0.36
RAB11B-204ENST00000600719 SCG5P05408 212 aa12.81□□□□□ -0.36
RAB11B-204ENST00000600719 THBDP07204 575 aa12.81□□□□□ -0.36
RAB11B-204ENST00000600719 GAAP10253 952 aa12.81□□□□□ -0.36
RAB11B-204ENST00000600719 CLUP10909 449 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms