RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 FAM220AQ7Z4H9 259 aa13.55□□□□□ -0.24
HIF3A-218ENST00000600383 CEACAM19Q7Z692 300 aa13.55□□□□□ -0.24
HIF3A-218ENST00000600383 BORCS5Q969J3 196 aa13.55□□□□□ -0.24
HIF3A-218ENST00000600383 PGLYRP3Q96LB9 341 aa13.55□□□□□ -0.24
HIF3A-218ENST00000600383 AGAP4Q96P64 663 aa13.55□□□□□ -0.24
HIF3A-218ENST00000600383 UCN2Q96RP3 112 aa13.55□□□□□ -0.24
HIF3A-218ENST00000600383 SMAD5Q99717 465 aaKnown RBP13.55□□□□□ -0.24
HIF3A-218ENST00000600383 COQ7Q99807 217 aa13.55□□□□□ -0.24
HIF3A-218ENST00000600383 PDCD1LG2Q9BQ51 273 aa13.55□□□□□ -0.24
HIF3A-218ENST00000600383 FAM173AQ9BQD7 235 aa13.55□□□□□ -0.24
HIF3A-218ENST00000600383 KCNN2Q9H2S1 579 aa13.55□□□□□ -0.24
HIF3A-218ENST00000600383 FANCFQ9NPI8 374 aa13.55□□□□□ -0.24
HIF3A-218ENST00000600383 MRM2Q9UI43 246 aaKnown RBP13.55□□□□□ -0.24
HIF3A-218ENST00000600383 A0A1W2PPK0 400 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 ZNF726A6NNF4 738 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 KRT8P05787 483 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 ENPP1P22413 925 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 GDI2P50395 445 aaKnown RBP13.54□□□□□ -0.24
HIF3A-218ENST00000600383 BLVRAP53004 296 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 ZNF846Q147U1 533 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 CDK5R1Q15078 307 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 FAM27D1Q5T7N8 215 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 RPL22L1Q6P5R6 122 aaKnown RBP13.54□□□□□ -0.24
HIF3A-218ENST00000600383 ADPRHL1Q8NDY3 354 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 OTOSQ8NHW6 89 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 S100ZQ8WXG8 99 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 SLC25A46Q96AG3 418 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 AMELYQ99218 206 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 NXF2Q9GZY0 626 aaKnown RBP13.54□□□□□ -0.24
HIF3A-218ENST00000600383 AKIP1Q9NQ31 210 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 TMEM14AQ9Y6G1 99 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 ZFHX4Q86UP3 3567 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 NPIPB13A6NJU9 1138 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 GJE1A6NN92 205 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 NPIPB4C9JG80 1138 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 OGG1O15527 345 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 TRAF3IP2O43734 574 aaPredicted RBP13.54□□□□□ -0.24
HIF3A-218ENST00000600383 CCL11P51671 97 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 CLDN17P56750 224 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 CSNK2A1P68400 391 aaPredicted RBP13.54□□□□□ -0.24
HIF3A-218ENST00000600383 ACSM3Q53FZ2 586 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 ZNF684Q5T5D7 378 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 LIPNQ5VXI9 398 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 FAM205BPQ63HN1 556 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 DNM1P34Q6PK57 102 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 NHLRC1Q6VVB1 395 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 EGFL6Q8IUX8 553 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 HSD17B8Q92506 261 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 SMIM19Q96E16 107 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 DACH2Q96NX9 599 aa13.54□□□□□ -0.24
HIF3A-218ENST00000600383 PPIL3Q9H2H8 161 aaKnown RBP13.54□□□□□ -0.24
HIF3A-218ENST00000600383 LOC400499M0QZD8 3231 aa13.53□□□□□ -0.24
HIF3A-218ENST00000600383 SHISA3A0PJX4 238 aa13.53□□□□□ -0.24
HIF3A-218ENST00000600383 FAM166BA8MTA8 275 aa13.53□□□□□ -0.24
HIF3A-218ENST00000600383 EIF1BO60739 113 aaKnown RBP13.53□□□□□ -0.24
HIF3A-218ENST00000600383 NCR1O76036 304 aa13.53□□□□□ -0.24
HIF3A-218ENST00000600383 ZNF823P16415 610 aa13.53□□□□□ -0.24
HIF3A-218ENST00000600383 RRADP55042 308 aa13.53□□□□□ -0.24
HIF3A-218ENST00000600383 CARD18P57730 90 aa13.53□□□□□ -0.24
HIF3A-218ENST00000600383 NANOS3P60323 173 aaKnown RBP13.53□□□□□ -0.24
HIF3A-218ENST00000600383 H3F3AP84243 136 aa13.53□□□□□ -0.24
HIF3A-218ENST00000600383 CCDC58Q4VC31 144 aa13.53□□□□□ -0.24
HIF3A-218ENST00000600383 LRRN1Q6UXK5 716 aa13.53□□□□□ -0.24
HIF3A-218ENST00000600383 LINC00299Q6ZSB3 139 aa13.53□□□□□ -0.24
HIF3A-218ENST00000600383 GALNTL5Q7Z4T8 443 aa13.53□□□□□ -0.24
HIF3A-218ENST00000600383 KCTD20Q7Z5Y7 419 aa13.53□□□□□ -0.24
HIF3A-218ENST00000600383 MS4A15Q8N5U1 240 aa13.53□□□□□ -0.24
HIF3A-218ENST00000600383 ZNF775Q96BV0 537 aaPredicted RBP13.53□□□□□ -0.24
HIF3A-218ENST00000600383 SLC25A44Q96H78 314 aaPredicted RBP13.53□□□□□ -0.24
HIF3A-218ENST00000600383 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.53□□□□□ -0.24
HIF3A-218ENST00000600383 QPCTLQ9NXS2 382 aa13.53□□□□□ -0.24
HIF3A-218ENST00000600383 SLCO1C1Q9NYB5 712 aa13.53□□□□□ -0.24
HIF3A-218ENST00000600383 A3GALT2U3KPV4 340 aa13.53□□□□□ -0.24
HIF3A-218ENST00000600383 URB1O60287 2271 aaKnown RBP13.52□□□□□ -0.24
HIF3A-218ENST00000600383 A0A1B0GTH9 108 aa13.52□□□□□ -0.24
HIF3A-218ENST00000600383 CENPBD1B2RD01 187 aa13.52□□□□□ -0.24
HIF3A-218ENST00000600383 KHDRBS3O75525 346 aaKnown RBP13.52□□□□□ -0.24
HIF3A-218ENST00000600383 IGHG1P01857 330 aa13.52□□□□□ -0.24
HIF3A-218ENST00000600383 WT1P19544 449 aaPredicted RBP13.52□□□□□ -0.24
HIF3A-218ENST00000600383 HBMQ6B0K9 141 aa13.52□□□□□ -0.24
HIF3A-218ENST00000600383 KCNE4Q8WWG9 221 aa13.52□□□□□ -0.24
HIF3A-218ENST00000600383 MNTQ99583 582 aa13.52□□□□□ -0.24
HIF3A-218ENST00000600383 NAA11Q9BSU3 229 aaPredicted RBP13.52□□□□□ -0.24
HIF3A-218ENST00000600383 MRPL13Q9BYD1 178 aaKnown RBP13.52□□□□□ -0.24
HIF3A-218ENST00000600383 SRXN1Q9BYN0 137 aa13.52□□□□□ -0.24
HIF3A-218ENST00000600383 WDR12Q9GZL7 423 aaKnown RBP13.52□□□□□ -0.24
HIF3A-218ENST00000600383 SEC61A2Q9H9S3 476 aa13.52□□□□□ -0.24
HIF3A-218ENST00000600383 SIAEQ9HAT2 523 aa13.52□□□□□ -0.24
HIF3A-218ENST00000600383 RASD1Q9Y272 281 aa13.52□□□□□ -0.24
HIF3A-218ENST00000600383 PEX16Q9Y5Y5 336 aa13.52□□□□□ -0.24
HIF3A-218ENST00000600383 SPTBN2O15020 2390 aa13.52□□□□□ -0.25
HIF3A-218ENST00000600383 A0A087WV48 116 aa13.52□□□□□ -0.25
HIF3A-218ENST00000600383 NPIPA2E9PIF3 369 aa13.52□□□□□ -0.25
HIF3A-218ENST00000600383 NPIPA3F8WFD2 350 aa13.52□□□□□ -0.25
HIF3A-218ENST00000600383 FZD7O75084 574 aa13.52□□□□□ -0.25
HIF3A-218ENST00000600383 CELA3AP09093 270 aa13.52□□□□□ -0.25
HIF3A-218ENST00000600383 CD53P19397 219 aa13.52□□□□□ -0.25
HIF3A-218ENST00000600383 POU3F2P20265 443 aaPredicted RBP13.52□□□□□ -0.25
HIF3A-218ENST00000600383 EIF1AXP47813 144 aaKnown RBP13.52□□□□□ -0.25
HIF3A-218ENST00000600383 SUCLG1P53597 346 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms