RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 PSMB1P20618 241 aaKnown RBP11.12□□□□□ -0.63
CHMP2A-206ENST00000600118 CRABP1P29762 137 aa11.12□□□□□ -0.63
CHMP2A-206ENST00000600118 CD79BP40259 229 aa11.12□□□□□ -0.63
CHMP2A-206ENST00000600118 SH3BGRP55822 239 aaPredicted RBP11.12□□□□□ -0.63
CHMP2A-206ENST00000600118 SFRP5Q5T4F7 317 aa11.12□□□□□ -0.63
CHMP2A-206ENST00000600118 TTC23Q5W5X9 447 aa11.12□□□□□ -0.63
CHMP2A-206ENST00000600118 IZUMO2Q6UXV1 221 aa11.12□□□□□ -0.63
CHMP2A-206ENST00000600118 STAC2Q6ZMT1 411 aa11.12□□□□□ -0.63
CHMP2A-206ENST00000600118 FOXL2NBQ6ZUU3 175 aa11.12□□□□□ -0.63
CHMP2A-206ENST00000600118 CXorf67Q86X51 503 aaPredicted RBP11.12□□□□□ -0.63
CHMP2A-206ENST00000600118 OR6V1Q8N148 313 aa11.12□□□□□ -0.63
CHMP2A-206ENST00000600118 DHRSXQ8N5I4 330 aa11.12□□□□□ -0.63
CHMP2A-206ENST00000600118 TRUB1Q8WWH5 349 aaKnown RBP11.12□□□□□ -0.63
CHMP2A-206ENST00000600118 TFAP2CQ92754 450 aa11.12□□□□□ -0.63
CHMP2A-206ENST00000600118 PTP4A1Q93096 173 aa11.12□□□□□ -0.63
CHMP2A-206ENST00000600118 TSSK2Q96PF2 358 aa11.12□□□□□ -0.63
CHMP2A-206ENST00000600118 HCAR1Q9BXC0 346 aa11.12□□□□□ -0.63
CHMP2A-206ENST00000600118 NUAK2Q9H093 628 aa11.12□□□□□ -0.63
CHMP2A-206ENST00000600118 RACGAP1Q9H0H5 632 aa11.12□□□□□ -0.63
CHMP2A-206ENST00000600118 KCNJ16Q9NPI9 418 aa11.12□□□□□ -0.63
CHMP2A-206ENST00000600118 RPRD1BQ9NQG5 326 aaKnown RBP11.12□□□□□ -0.63
CHMP2A-206ENST00000600118 GALNT8Q9NY28 637 aa11.12□□□□□ -0.63
CHMP2A-206ENST00000600118 TAS2R16Q9NYV7 291 aa11.12□□□□□ -0.63
CHMP2A-206ENST00000600118 B9D1Q9UPM9 204 aa11.12□□□□□ -0.63
CHMP2A-206ENST00000600118 GPR52Q9Y2T5 361 aa11.12□□□□□ -0.63
CHMP2A-206ENST00000600118 GMPPBQ9Y5P6 360 aa11.12□□□□□ -0.63
CHMP2A-206ENST00000600118 DOPEY1Q5JWR5 2465 aa11.12□□□□□ -0.63
CHMP2A-206ENST00000600118 PCNX1Q96RV3 2341 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 FAM183AA6NL82 134 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 ZNF99A8MXY4 864 aaPredicted RBP11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 SLC16A7O60669 478 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 KHDRBS3O75525 346 aaKnown RBP11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 GABRB1P18505 474 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 CCKARP32238 428 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 CAPGP40121 348 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 CDC42P60953 191 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 SNRPGP62308 76 aaKnown RBP11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 ARF1P84077 181 aaKnown RBP11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 FAM27E3Q08E93 113 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 DBPQ10586 325 aaPredicted RBP11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 ETFDHQ16134 617 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 GABRA6Q16445 453 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 NRN1LQ496H8 165 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 SLC25A30Q5SVS4 291 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 AADACL4Q5VUY2 407 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 ZNF691Q5VV52 312 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 PLBD1Q6P4A8 553 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 DNM1P34Q6PK57 102 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 USP51Q70EK9 711 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 CPOQ8IVL8 374 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 TCEANCQ8N8B7 351 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 ZNF555Q8NEP9 628 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 C1orf162Q8NEQ5 155 aaPredicted RBP11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 OR8J1Q8NGP2 316 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 OR9Q1Q8NGQ5 310 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 OR1K1Q8NGR3 316 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 RHOXF1Q8NHV9 184 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 FAM81AQ8TBF8 368 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 TMEM163Q8TC26 289 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 SSC4DQ8WTU2 575 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 ZNRF4Q8WWF5 429 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 CYGBQ8WWM9 190 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 NSMAFQ92636 917 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 RNASE6Q93091 150 aaKnown RBP11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 UBE2FQ969M7 185 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 PLEKHA8Q96JA3 519 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 MUS81Q96NY9 551 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 IL4I1Q96RQ9 567 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 NELFAQ9H3P2 528 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 MED20Q9H944 212 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 TMEM38BQ9NVV0 291 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 ZNF226Q9NYT6 803 aa11.11□□□□□ -0.63
CHMP2A-206ENST00000600118 PRR23D1E9PI22 279 aaPredicted RBP11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 TLX2O43763 284 aaPredicted RBP11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 LYZL6O75951 148 aa11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 CLIC3O95833 236 aa11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 PRR23D2P0DMB1 279 aaPredicted RBP11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 GAAP10253 952 aa11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 SPI1P17947 270 aa11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 PAICSP22234 425 aaKnown RBP11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 SLC2A5P22732 501 aa11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 UGT2B10P36537 528 aa11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 ZNF84P51523 738 aa11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 MRPS34P82930 218 aaKnown RBP11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 TGFBR3Q03167 851 aa11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 IL18R1Q13478 541 aa11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 C6orf52Q5T4I8 152 aa11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 LINC01590Q5TEZ4 76 aa11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 C9orf135Q5VTT2 229 aa11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 CXXC5Q7LFL8 322 aaKnown RBP11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 GLB1L2Q8IW92 636 aa11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 ENTHD1Q8IYW4 607 aa11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 DEPDC4Q8N2C3 294 aa11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 OR2T4Q8NH00 348 aa11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 BCL2L2Q92843 193 aaPredicted RBP11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 NABP1Q96AH0 204 aa11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 FOXB1Q99853 325 aa11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 HDHD5Q9BXW7 423 aa11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 OR10A4Q9H209 315 aa11.1□□□□□ -0.63
CHMP2A-206ENST00000600118 SRA1Q9HD15 236 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms