RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 WNT9BO14905 357 aa10.71□□□□□ -0.69
TRIM28-212ENST00000597995 PPIHO43447 177 aaKnown RBP10.71□□□□□ -0.69
TRIM28-212ENST00000597995 ENTPD5O75356 428 aa10.71□□□□□ -0.69
TRIM28-212ENST00000597995 RP2O75695 350 aa10.71□□□□□ -0.69
TRIM28-212ENST00000597995 SERPINI2O75830 405 aa10.71□□□□□ -0.69
TRIM28-212ENST00000597995 ASAH2BP0C7U1 165 aa10.71□□□□□ -0.69
TRIM28-212ENST00000597995 ADORA3P0DMS8 318 aa10.71□□□□□ -0.69
TRIM28-212ENST00000597995 B4GALT1P15291 398 aa10.71□□□□□ -0.69
TRIM28-212ENST00000597995 KDELR2P33947 212 aa10.71□□□□□ -0.69
TRIM28-212ENST00000597995 OR1E2P47887 323 aa10.71□□□□□ -0.69
TRIM28-212ENST00000597995 GIPRP48546 466 aa10.71□□□□□ -0.69
TRIM28-212ENST00000597995 SELENOVP59797 346 aa10.71□□□□□ -0.69
TRIM28-212ENST00000597995 HILS1P60008 231 aa10.71□□□□□ -0.69
TRIM28-212ENST00000597995 ACTG1P63261 375 aa10.71□□□□□ -0.69
TRIM28-212ENST00000597995 MYBPC1Q00872 1141 aa10.71□□□□□ -0.69
TRIM28-212ENST00000597995 ZP4Q12836 540 aa10.71□□□□□ -0.69
TRIM28-212ENST00000597995 CAMK2DQ13557 499 aa10.71□□□□□ -0.69
TRIM28-212ENST00000597995 MAD2L1BPQ15013 274 aaPredicted RBP10.71□□□□□ -0.69
TRIM28-212ENST00000597995 TTC33Q6PID6 262 aaPredicted RBP10.71□□□□□ -0.69
TRIM28-212ENST00000597995 SLC15A3Q8IY34 581 aa10.71□□□□□ -0.69
TRIM28-212ENST00000597995 C3orf56Q8N813 242 aa10.71□□□□□ -0.69
TRIM28-212ENST00000597995 PCYOX1LQ8NBM8 494 aa10.71□□□□□ -0.69
TRIM28-212ENST00000597995 RASSF5Q8WWW0 418 aa10.71□□□□□ -0.69
TRIM28-212ENST00000597995 GCDHQ92947 438 aaPredicted RBP10.71□□□□□ -0.69
TRIM28-212ENST00000597995 MPP4Q96JB8 637 aa10.71□□□□□ -0.69
TRIM28-212ENST00000597995 RBM4Q9BWF3 364 aaKnown RBP10.71□□□□□ -0.69
TRIM28-212ENST00000597995 NARFLQ9H6Q4 476 aa10.71□□□□□ -0.69
TRIM28-212ENST00000597995 LPAR2Q9HBW0 351 aa10.71□□□□□ -0.69
TRIM28-212ENST00000597995 MYEF2Q9P2K5 600 aaKnown RBP10.71□□□□□ -0.69
TRIM28-212ENST00000597995 DUSP13Q9UII6 198 aa10.71□□□□□ -0.69
TRIM28-212ENST00000597995 GPR160Q9UJ42 338 aa10.71□□□□□ -0.69
TRIM28-212ENST00000597995 A0A1W2PPW3 197 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 SLC22A23A1A5C7 686 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 SLC22A2O15244 555 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 PNPP00491 289 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 NAT2P11245 290 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 COX4I1P13073 169 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 EGR1P18146 543 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 EPHA1P21709 976 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 AHCYP23526 432 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 LIMS1P48059 325 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 UGT2B15P54855 530 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 BIDP55957 195 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 PIN1Q13526 163 aaPredicted RBP10.7□□□□□ -0.7
TRIM28-212ENST00000597995 RAB39AQ14964 217 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 CYBRD1Q53TN4 286 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 HSP90B2PQ58FF3 399 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 ACSM5Q6NUN0 579 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 C8orf82Q6P1X6 216 aaPredicted RBP10.7□□□□□ -0.7
TRIM28-212ENST00000597995 FAHD2BQ6P2I3 314 aaPredicted RBP10.7□□□□□ -0.7
TRIM28-212ENST00000597995 ERICH5Q6P6B1 374 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 PEG10Q86TG7 708 aaKnown RBP10.7□□□□□ -0.7
TRIM28-212ENST00000597995 MICU2Q8IYU8 434 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 PFN4Q8NHR9 129 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 RP9Q8TA86 221 aaKnown RBP10.7□□□□□ -0.7
TRIM28-212ENST00000597995 TMEM255BQ8WV15 326 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 FAHD2AQ96GK7 314 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 SLC19A3Q9BZV2 496 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 G6PC2Q9NQR9 355 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 C20orf141Q9NUB4 165 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 GID8Q9NWU2 228 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 NKIRAS2Q9NYR9 191 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 RIMS3Q9UJD0 308 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 ZNF229Q9UJW7 825 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 BAG5Q9UL15 447 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 FZR1Q9UM11 496 aa10.7□□□□□ -0.7
TRIM28-212ENST00000597995 IGLV3-9A0A075B6K5 115 aa10.69□□□□□ -0.7
TRIM28-212ENST00000597995 ELOVL7A1L3X0 281 aa10.69□□□□□ -0.7
TRIM28-212ENST00000597995 C17orf100A8MU93 164 aa10.69□□□□□ -0.7
TRIM28-212ENST00000597995 NME4O00746 187 aa10.69□□□□□ -0.7
TRIM28-212ENST00000597995 NCR1O76036 304 aa10.69□□□□□ -0.7
TRIM28-212ENST00000597995 OR8G3PP0DMU2 310 aa10.69□□□□□ -0.7
TRIM28-212ENST00000597995 CSNK1A1P48729 337 aa10.69□□□□□ -0.7
TRIM28-212ENST00000597995 TEKQ02763 1124 aa10.69□□□□□ -0.7
TRIM28-212ENST00000597995 MELKQ14680 651 aa10.69□□□□□ -0.7
TRIM28-212ENST00000597995 NKPD1Q17RQ9 610 aa10.69□□□□□ -0.7
TRIM28-212ENST00000597995 PCGF3Q3KNV8 242 aa10.69□□□□□ -0.7
TRIM28-212ENST00000597995 LRRC23Q53EV4 343 aaPredicted RBP10.69□□□□□ -0.7
TRIM28-212ENST00000597995 RGS7BPQ6MZT1 257 aaPredicted RBP10.69□□□□□ -0.7
TRIM28-212ENST00000597995 C1orf229Q6ZS94 237 aaPredicted RBP10.69□□□□□ -0.7
TRIM28-212ENST00000597995 SLC35D2Q76EJ3 337 aa10.69□□□□□ -0.7
TRIM28-212ENST00000597995 DPPA2Q7Z7J5 298 aa10.69□□□□□ -0.7
TRIM28-212ENST00000597995 ZNF584Q8IVC4 421 aa10.69□□□□□ -0.7
TRIM28-212ENST00000597995 SKA3Q8IX90 412 aa10.69□□□□□ -0.7
TRIM28-212ENST00000597995 SLC22A24Q8N4F4 322 aa10.69□□□□□ -0.7
TRIM28-212ENST00000597995 OR2T12Q8NG77 320 aa10.69□□□□□ -0.7
TRIM28-212ENST00000597995 OR6X1Q8NH79 312 aa10.69□□□□□ -0.7
TRIM28-212ENST00000597995 TMEM54Q969K7 222 aa10.69□□□□□ -0.7
TRIM28-212ENST00000597995 NANSQ9NR45 359 aa10.69□□□□□ -0.7
TRIM28-212ENST00000597995 SLCO1C1Q9NYB5 712 aa10.69□□□□□ -0.7
TRIM28-212ENST00000597995 GLTPQ9NZD2 209 aa10.69□□□□□ -0.7
TRIM28-212ENST00000597995 A4GNTQ9UNA3 340 aa10.69□□□□□ -0.7
TRIM28-212ENST00000597995 SNX13Q9Y5W8 968 aa10.69□□□□□ -0.7
TRIM28-212ENST00000597995 J3QLI3 93 aa10.68□□□□□ -0.7
TRIM28-212ENST00000597995 OR5F1O95221 314 aa10.68□□□□□ -0.7
TRIM28-212ENST00000597995 MT-ND1P03886 318 aa10.68□□□□□ -0.7
TRIM28-212ENST00000597995 TSPAN19P0C672 248 aa10.68□□□□□ -0.7
TRIM28-212ENST00000597995 ZNF250P15622 560 aa10.68□□□□□ -0.7
TRIM28-212ENST00000597995 CRYBB2P43320 205 aa10.68□□□□□ -0.7
TRIM28-212ENST00000597995 MAGEB1P43366 347 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms