RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 CD79AP11912 226 aa13.07□□□□□ -0.32
TGFB1-202ENST00000597453 DAOP14920 347 aa13.07□□□□□ -0.32
TGFB1-202ENST00000597453 ZNF14P17017 642 aaPredicted RBP13.07□□□□□ -0.32
TGFB1-202ENST00000597453 NR4A1P22736 598 aa13.07□□□□□ -0.32
TGFB1-202ENST00000597453 AHCYP23526 432 aa13.07□□□□□ -0.32
TGFB1-202ENST00000597453 MSX2P35548 267 aaPredicted RBP13.07□□□□□ -0.32
TGFB1-202ENST00000597453 UGT2B15P54855 530 aa13.07□□□□□ -0.32
TGFB1-202ENST00000597453 FAM120AOSQ5T036 256 aa13.07□□□□□ -0.32
TGFB1-202ENST00000597453 PXKQ7Z7A4 578 aa13.07□□□□□ -0.32
TGFB1-202ENST00000597453 CYP4Z1Q86W10 505 aa13.07□□□□□ -0.32
TGFB1-202ENST00000597453 FAM86B1Q8N7N1 296 aa13.07□□□□□ -0.32
TGFB1-202ENST00000597453 IL17RDQ8NFM7 739 aa13.07□□□□□ -0.32
TGFB1-202ENST00000597453 OR6N1Q8NGY5 312 aa13.07□□□□□ -0.32
TGFB1-202ENST00000597453 OR5J2Q8NH18 312 aa13.07□□□□□ -0.32
TGFB1-202ENST00000597453 NEU4Q8WWR8 484 aaPredicted RBP13.07□□□□□ -0.32
TGFB1-202ENST00000597453 FNDC11Q9BVV2 318 aa13.07□□□□□ -0.32
TGFB1-202ENST00000597453 DYNLRB1Q9NP97 96 aa13.07□□□□□ -0.32
TGFB1-202ENST00000597453 B3GAT2Q9NPZ5 323 aa13.07□□□□□ -0.32
TGFB1-202ENST00000597453 NANSQ9NR45 359 aa13.07□□□□□ -0.32
TGFB1-202ENST00000597453 MAN2C1Q9NTJ4 1040 aa13.07□□□□□ -0.32
TGFB1-202ENST00000597453 TAS2R1Q9NYW7 299 aa13.07□□□□□ -0.32
TGFB1-202ENST00000597453 ZNF229Q9UJW7 825 aa13.07□□□□□ -0.32
TGFB1-202ENST00000597453 POFUT2Q9Y2G5 429 aa13.07□□□□□ -0.32
TGFB1-202ENST00000597453 HTR3EA5X5Y0 456 aa13.06□□□□□ -0.32
TGFB1-202ENST00000597453 ZNF726A6NNF4 738 aa13.06□□□□□ -0.32
TGFB1-202ENST00000597453 VSTM5A8MXK1 200 aa13.06□□□□□ -0.32
TGFB1-202ENST00000597453 C11orf98E9PRG8 122 aa13.06□□□□□ -0.32
TGFB1-202ENST00000597453 FFAR1O14842 300 aa13.06□□□□□ -0.32
TGFB1-202ENST00000597453 CH25HO95992 272 aa13.06□□□□□ -0.32
TGFB1-202ENST00000597453 ADRA2AP08913 450 aa13.06□□□□□ -0.32
TGFB1-202ENST00000597453 ASAH2BP0C7U1 165 aa13.06□□□□□ -0.32
TGFB1-202ENST00000597453 ADORA3P0DMS8 318 aa13.06□□□□□ -0.32
TGFB1-202ENST00000597453 ZNF35P13682 527 aa13.06□□□□□ -0.32
TGFB1-202ENST00000597453 IFNGR1P15260 489 aa13.06□□□□□ -0.32
TGFB1-202ENST00000597453 GIFP27352 417 aa13.06□□□□□ -0.32
TGFB1-202ENST00000597453 IL2RGP31785 369 aa13.06□□□□□ -0.32
TGFB1-202ENST00000597453 YAP1P46937 504 aaKnown RBP13.06□□□□□ -0.32
TGFB1-202ENST00000597453 CSNK1A1P48729 337 aa13.06□□□□□ -0.32
TGFB1-202ENST00000597453 BIDP55957 195 aa13.06□□□□□ -0.32
TGFB1-202ENST00000597453 TRAM2Q15035 370 aa13.06□□□□□ -0.32
TGFB1-202ENST00000597453 TSEN54Q7Z6J9 526 aaKnown RBP13.06□□□□□ -0.32
TGFB1-202ENST00000597453 ZNF540Q8NDQ6 660 aa13.06□□□□□ -0.32
TGFB1-202ENST00000597453 PFN4Q8NHR9 129 aa13.06□□□□□ -0.32
TGFB1-202ENST00000597453 PYURFQ96I23 114 aa13.06□□□□□ -0.32
TGFB1-202ENST00000597453 FOXB1Q99853 325 aa13.06□□□□□ -0.32
TGFB1-202ENST00000597453 MRPL37Q9BZE1 423 aaKnown RBP13.06□□□□□ -0.32
TGFB1-202ENST00000597453 MUC13Q9H3R2 512 aa13.06□□□□□ -0.32
TGFB1-202ENST00000597453 TPK1Q9H3S4 243 aa13.06□□□□□ -0.32
TGFB1-202ENST00000597453 ANKRD19PQ9H560 264 aa13.06□□□□□ -0.32
TGFB1-202ENST00000597453 ACTR3BQ9P1U1 418 aa13.06□□□□□ -0.32
TGFB1-202ENST00000597453 FBXO9Q9UK97 447 aaPredicted RBP13.06□□□□□ -0.32
TGFB1-202ENST00000597453 MED31Q9Y3C7 131 aa13.06□□□□□ -0.32
TGFB1-202ENST00000597453 CMAHPQ9Y471 501 aa13.06□□□□□ -0.32
TGFB1-202ENST00000597453 LYNX1G3V0Z9 82 aa13.05□□□□□ -0.32
TGFB1-202ENST00000597453 OR7A10O76100 309 aa13.05□□□□□ -0.32
TGFB1-202ENST00000597453 TGFAP01135 160 aa13.05□□□□□ -0.32
TGFB1-202ENST00000597453 SEMG1P04279 462 aa13.05□□□□□ -0.32
TGFB1-202ENST00000597453 PATE4P0C8F1 98 aa13.05□□□□□ -0.32
TGFB1-202ENST00000597453 LYNX1P0DP58 116 aa13.05□□□□□ -0.32
TGFB1-202ENST00000597453 SRD5A1P18405 259 aa13.05□□□□□ -0.32
TGFB1-202ENST00000597453 GIPRP48546 466 aa13.05□□□□□ -0.32
TGFB1-202ENST00000597453 PTDSS1P48651 473 aaKnown RBP13.05□□□□□ -0.32
TGFB1-202ENST00000597453 SRSF2Q01130 221 aaKnown RBP13.05□□□□□ -0.32
TGFB1-202ENST00000597453 ZP4Q12836 540 aa13.05□□□□□ -0.32
TGFB1-202ENST00000597453 KRTAP24-1Q3LI83 254 aa13.05□□□□□ -0.32
TGFB1-202ENST00000597453 C10orf67Q8IYJ2 551 aa13.05□□□□□ -0.32
TGFB1-202ENST00000597453 ZNF786Q8N393 782 aa13.05□□□□□ -0.32
TGFB1-202ENST00000597453 LRRC17Q8N6Y2 441 aa13.05□□□□□ -0.32
TGFB1-202ENST00000597453 FGFBP3Q8TAT2 258 aa13.05□□□□□ -0.32
TGFB1-202ENST00000597453 LIPHQ8WWY8 451 aa13.05□□□□□ -0.32
TGFB1-202ENST00000597453 TMEM54Q969K7 222 aa13.05□□□□□ -0.32
TGFB1-202ENST00000597453 MRPL24Q96A35 216 aaKnown RBP13.05□□□□□ -0.32
TGFB1-202ENST00000597453 SGTBQ96EQ0 304 aa13.05□□□□□ -0.32
TGFB1-202ENST00000597453 C7orf34Q96L11 122 aa13.05□□□□□ -0.32
TGFB1-202ENST00000597453 TAS2R5Q9NYW4 299 aa13.05□□□□□ -0.32
TGFB1-202ENST00000597453 NDUFAF4Q9P032 175 aa13.05□□□□□ -0.32
TGFB1-202ENST00000597453 LILRA1O75019 489 aa13.04□□□□□ -0.32
TGFB1-202ENST00000597453 OR6A2O95222 327 aa13.04□□□□□ -0.32
TGFB1-202ENST00000597453 HIST1H2ABP04908 130 aa13.04□□□□□ -0.32
TGFB1-202ENST00000597453 ERCC1P07992 297 aaPredicted RBP13.04□□□□□ -0.32
TGFB1-202ENST00000597453 TACSTD2P09758 323 aa13.04□□□□□ -0.32
TGFB1-202ENST00000597453 UMPSP11172 480 aa13.04□□□□□ -0.32
TGFB1-202ENST00000597453 ITGA2P17301 1181 aa13.04□□□□□ -0.32
TGFB1-202ENST00000597453 RHCEP18577 417 aa13.04□□□□□ -0.32
TGFB1-202ENST00000597453 FUT4P22083 530 aa13.04□□□□□ -0.32
TGFB1-202ENST00000597453 RAB1AP62820 205 aa13.04□□□□□ -0.32
TGFB1-202ENST00000597453 MELKQ14680 651 aa13.04□□□□□ -0.32
TGFB1-202ENST00000597453 TRIP10Q15642 601 aa13.04□□□□□ -0.32
TGFB1-202ENST00000597453 MTX3Q5HYI7 312 aa13.04□□□□□ -0.32
TGFB1-202ENST00000597453 SLC35D2Q76EJ3 337 aa13.04□□□□□ -0.32
TGFB1-202ENST00000597453 HIST3H2AQ7L7L0 130 aa13.04□□□□□ -0.32
TGFB1-202ENST00000597453 NANOGNBQ7Z5D8 188 aa13.04□□□□□ -0.32
TGFB1-202ENST00000597453 ZNF584Q8IVC4 421 aa13.04□□□□□ -0.32
TGFB1-202ENST00000597453 SKA3Q8IX90 412 aa13.04□□□□□ -0.32
TGFB1-202ENST00000597453 OR6X1Q8NH79 312 aa13.04□□□□□ -0.32
TGFB1-202ENST00000597453 UBASH3BQ8TF42 649 aa13.04□□□□□ -0.32
TGFB1-202ENST00000597453 ACOT11Q8WXI4 607 aaPredicted RBP13.04□□□□□ -0.32
TGFB1-202ENST00000597453 HIST1H2ACQ93077 130 aa13.04□□□□□ -0.32
TGFB1-202ENST00000597453 SNX18Q96RF0 628 aa13.04□□□□□ -0.32
TGFB1-202ENST00000597453 SYT3Q9BQG1 590 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms