RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 VRK1Q99986 396 aaPredicted RBP9.08□□□□□ -0.96
CCDC9-203ENST00000596938 ALG12Q9BV10 488 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 FAM107BQ9H098 131 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 C1orf198Q9H425 327 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 GORASP2Q9H8Y8 452 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 NMNAT1Q9HAN9 279 aaPredicted RBP9.08□□□□□ -0.96
CCDC9-203ENST00000596938 SIAEQ9HAT2 523 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 SPAG4Q9NPE6 437 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 DCAF13Q9NV06 445 aaKnown RBP9.08□□□□□ -0.96
CCDC9-203ENST00000596938 RHCGQ9UBD6 479 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 ZNF346Q9UL40 294 aaKnown RBP9.08□□□□□ -0.96
CCDC9-203ENST00000596938 ENPP4Q9Y6X5 453 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 FN1P02751 2386 aaKnown RBP9.08□□□□□ -0.96
CCDC9-203ENST00000596938 ALPK2Q86TB3 2170 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 A0A1W2PRQ8 180 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 SLC22A23A1A5C7 686 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 EFCAB9A8MZ26 197 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 GPRIN2O60269 458 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 PIP5K1CO60331 668 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 CRLF1O75462 422 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 LY6HO94772 140 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 IGHMP01871 453 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 ERCC1P07992 297 aaPredicted RBP9.07□□□□□ -0.96
CCDC9-203ENST00000596938 SAGP10523 405 aaPredicted RBP9.07□□□□□ -0.96
CCDC9-203ENST00000596938 NCK1P16333 377 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 RHCEP18577 417 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 USF1P22415 310 aaPredicted RBP9.07□□□□□ -0.96
CCDC9-203ENST00000596938 SLC9A3P48764 834 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 RPL27P61353 136 aaKnown RBP9.07□□□□□ -0.96
CCDC9-203ENST00000596938 VLDLRP98155 873 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 GALK2Q01415 458 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 DGCR6Q14129 220 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 TMEM249Q2WGJ8 235 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 FAM205BPQ63HN1 556 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 TMEM53Q6P2H8 277 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 TBPL2Q6SJ96 375 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 ZNF730Q6ZMV8 503 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 RRM2BQ7LG56 351 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 SLC16A14Q7RTX9 510 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 OAFQ86UD1 273 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 SVOPLQ8N434 492 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 ZNF540Q8NDQ6 660 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 OR51A7Q8NH64 312 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 HDAC2Q92769 488 aaKnown RBP9.07□□□□□ -0.96
CCDC9-203ENST00000596938 MRPL24Q96A35 216 aaKnown RBP9.07□□□□□ -0.96
CCDC9-203ENST00000596938 C7orf34Q96L11 122 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 RBP7Q96R05 134 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 KCNK17Q96T54 332 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 RNF121Q9H920 327 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 ADA2Q9NZK5 511 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 NDUFAF4Q9P032 175 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 ARL2BPQ9Y2Y0 163 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 UGT2A1Q9Y4X1 527 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 TLN2Q9Y4G6 2542 aa9.07□□□□□ -0.96
CCDC9-203ENST00000596938 A6NIZ1 184 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 SYNGR3O43761 229 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 PTP4A3O75365 173 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 GMNNO75496 209 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 SNAP29O95721 258 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 IGFBP1P08833 259 aaPredicted RBP9.06□□□□□ -0.96
CCDC9-203ENST00000596938 MMP7P09237 267 aaPredicted RBP9.06□□□□□ -0.96
CCDC9-203ENST00000596938 HSD17B1P14061 328 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 NR4A2P43354 598 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 CTXN1P60606 82 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 RAP1BP61224 184 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 RPS23P62266 143 aaKnown RBP9.06□□□□□ -0.96
CCDC9-203ENST00000596938 RAP1AP62834 184 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 MYBPC1Q00872 1141 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 PLP2Q04941 152 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 MSMPQ1L6U9 139 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 ZBED5Q49AG3 693 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 GKAP1Q5VSY0 366 aaPredicted RBP9.06□□□□□ -0.96
CCDC9-203ENST00000596938 FAM27BQ5VT28 67 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 SLC25A47Q6Q0C1 308 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 ARIH2OSQ8N7S6 290 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 ANKS4BQ8N8V4 417 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 RBM15BQ8NDT2 890 aaKnown RBP9.06□□□□□ -0.96
CCDC9-203ENST00000596938 SLC30A7Q8NEW0 376 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 OR1J2Q8NGS2 313 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 SLC7A13Q8TCU3 470 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 FOXN4Q96NZ1 517 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 LRRC37BQ96QE4 947 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 MRPL37Q9BZE1 423 aaKnown RBP9.06□□□□□ -0.96
CCDC9-203ENST00000596938 LRMDAQ9H2I8 198 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 KCNN2Q9H2S1 579 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 MS4A5Q9H3V2 200 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 CD300AQ9UGN4 299 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 EGFL7Q9UHF1 273 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 SLC7A8Q9UHI5 535 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 SAMD4AQ9UPU9 718 aaKnown RBP9.06□□□□□ -0.96
CCDC9-203ENST00000596938 FAM32AQ9Y421 112 aaKnown RBP9.06□□□□□ -0.96
CCDC9-203ENST00000596938 ABCA2Q9BZC7 2435 aa9.06□□□□□ -0.96
CCDC9-203ENST00000596938 TRAV27A0A087WT01 109 aa9.05□□□□□ -0.96
CCDC9-203ENST00000596938 IGKV1D-43A0A0B4J1Z2 117 aa9.05□□□□□ -0.96
CCDC9-203ENST00000596938 IQCMA0A1B0GVH7 501 aa9.05□□□□□ -0.96
CCDC9-203ENST00000596938 SH3PXD2BA1X283 911 aa9.05□□□□□ -0.96
CCDC9-203ENST00000596938 A8MV72 311 aaPredicted RBP9.05□□□□□ -0.96
CCDC9-203ENST00000596938 CDC42EP2O14613 210 aa9.05□□□□□ -0.96
CCDC9-203ENST00000596938 AHCYL1O43865 530 aa9.05□□□□□ -0.96
CCDC9-203ENST00000596938 SLC2A10O95528 541 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms