RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 GIPC3Q8TF64 312 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 FOXN4Q96NZ1 517 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 SLC38A2Q96QD8 506 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 KCNK17Q96T54 332 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 FOXC2Q99958 501 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 MMADHCQ9H3L0 296 aaPredicted RBP9.67□□□□□ -0.86
LIG1-211ENST00000596457 EGLN3Q9H6Z9 239 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 YY1AP1Q9H869 796 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 SEC61A2Q9H9S3 476 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 OBP2BQ9NPH6 170 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 MOKQ9UQ07 419 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 MGAT4BQ9UQ53 548 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 PRR14LQ5THK1 2151 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 IGKV1D-43A0A0B4J1Z2 117 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 ZNF503-AS2A6NEH8 195 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 NPIPB13A6NJU9 1138 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 CENPBD1B2RD01 187 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 NPIPB4C9JG80 1138 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 HS3ST1O14792 307 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 FARS2O95363 451 aaKnown RBP9.66□□□□□ -0.86
LIG1-211ENST00000596457 CELA3BP08861 270 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 OR8G3PP0DMU2 310 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 NR2C1P13056 603 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 CBR1P16152 277 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 FPR3P25089 353 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 NOS3P29474 1203 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 SLC6A6P31641 620 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 GSSP48637 474 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 CENPAP49450 140 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 RAB1AP62820 205 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 KRR1Q13601 381 aaKnown RBP9.66□□□□□ -0.86
LIG1-211ENST00000596457 HIST3H3Q16695 136 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 GSG1Q2KHT4 349 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 ZNF672Q499Z4 452 aaPredicted RBP9.66□□□□□ -0.86
LIG1-211ENST00000596457 MESTQ5EB52 335 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 CLEC12AQ5QGZ9 265 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 THEM4Q5T1C6 240 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 FAM205BPQ63HN1 556 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 SLC25A47Q6Q0C1 308 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 DPY19L2P2Q6ZN68 376 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 SLC16A14Q7RTX9 510 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 TMEM179BQ7Z7N9 219 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 OR10G2Q8NGC3 310 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 FBXW5Q969U6 566 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 SLCO4A1Q96BD0 722 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 BOD1Q96IK1 185 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 CCL19Q99731 98 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 TMEM204Q9BSN7 226 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 ALG12Q9BV10 488 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 KCNN2Q9H2S1 579 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 HEATR1Q9H583 2144 aaKnown RBP9.66□□□□□ -0.86
LIG1-211ENST00000596457 DENND2DQ9H6A0 471 aaPredicted RBP9.66□□□□□ -0.86
LIG1-211ENST00000596457 NRIP3Q9NQ35 241 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 TMEM38BQ9NVV0 291 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 CISD1Q9NZ45 108 aaKnown RBP9.66□□□□□ -0.86
LIG1-211ENST00000596457 PDP1Q9P0J1 537 aaPredicted RBP9.66□□□□□ -0.86
LIG1-211ENST00000596457 CSMD2Q7Z408 3487 aa9.66□□□□□ -0.86
LIG1-211ENST00000596457 RAI1Q7Z5J4 1906 aaPredicted RBP9.65□□□□□ -0.86
LIG1-211ENST00000596457 SHISA9B4DS77 424 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 ATP6V1G2-DDX39BF2Z307 99 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 IMPA2O14732 288 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 ATE1O95260 518 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 RAB36O95755 333 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 IGFBP1P08833 259 aaPredicted RBP9.65□□□□□ -0.86
LIG1-211ENST00000596457 CECR9P0C854 216 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 SDHAP31040 664 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 ARR3P36575 388 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 GUCA1AP43080 201 aaPredicted RBP9.65□□□□□ -0.86
LIG1-211ENST00000596457 GIPRP48546 466 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 ART1P52961 327 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 CCNIQ14094 377 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 RAB39AQ14964 217 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 ETFDHQ16134 617 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 SLC35F1Q5T1Q4 408 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 C10orf128Q5T292 105 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 GPR139Q6DWJ6 353 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 TMEM53Q6P2H8 277 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 LEG1Q6P5S2 330 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 VHLLQ6RSH7 139 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 ASRGL1Q7L266 308 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 FAM122BQ7Z309 247 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 JAZF1Q86VZ6 243 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 CCDC36Q8IYA8 594 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 OR52L1Q8NGH7 329 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 FGFBP3Q8TAT2 258 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 REPIN1Q9BWE0 567 aaKnown RBP9.65□□□□□ -0.86
LIG1-211ENST00000596457 CXXC4Q9H2H0 198 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 NOX3Q9HBY0 568 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 TBC1D23Q9NUY8 699 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.65□□□□□ -0.86
LIG1-211ENST00000596457 LAMP3Q9UQV4 416 aa9.65□□□□□ -0.86
LIG1-211ENST00000596457 SLC22A23A1A5C7 686 aa9.64□□□□□ -0.87
LIG1-211ENST00000596457 PRSS37A4D1T9 235 aa9.64□□□□□ -0.87
LIG1-211ENST00000596457 E7EQL1 145 aa9.64□□□□□ -0.87
LIG1-211ENST00000596457 SLC16A7O60669 478 aa9.64□□□□□ -0.87
LIG1-211ENST00000596457 ENTPD5O75356 428 aa9.64□□□□□ -0.87
LIG1-211ENST00000596457 UBL3O95164 117 aa9.64□□□□□ -0.87
LIG1-211ENST00000596457 SOX14O95416 240 aa9.64□□□□□ -0.87
LIG1-211ENST00000596457 RENP00797 406 aa9.64□□□□□ -0.87
LIG1-211ENST00000596457 CRYAAP02489 173 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms