RNA–Protein interactions for RNA: ENST00000596386.1

PSMC4-204, Transcript of proteasome 26S subunit, ATPase 4, human

TSL 2

Gene PSMC4, Length 929 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC4-204	ENST00000596386	CLPTM1	O96005	669 aa		13.42	□□□□□ -0.26
PSMC4-204	ENST00000596386	PTH	P01270	115 aa		13.42	□□□□□ -0.26
PSMC4-204	ENST00000596386	IGF2	P01344	180 aa		13.42	□□□□□ -0.26
PSMC4-204	ENST00000596386	F13B	P05160	661 aa		13.42	□□□□□ -0.26
PSMC4-204	ENST00000596386	MSMB	P08118	114 aa		13.42	□□□□□ -0.26
PSMC4-204	ENST00000596386	ITGA2	P17301	1181 aa		13.42	□□□□□ -0.26
PSMC4-204	ENST00000596386	RBM34	P42696	430 aa	Known RBP	13.42	□□□□□ -0.26
PSMC4-204	ENST00000596386	MAGEB1	P43366	347 aa		13.42	□□□□□ -0.26
PSMC4-204	ENST00000596386	ZNF84	P51523	738 aa		13.42	□□□□□ -0.26
PSMC4-204	ENST00000596386	UGT2B15	P54855	530 aa		13.42	□□□□□ -0.26
PSMC4-204	ENST00000596386	ERVS71-1	P61550	626 aa		13.42	□□□□□ -0.26
PSMC4-204	ENST00000596386	TBC1D28	Q2M2D7	210 aa		13.42	□□□□□ -0.26
PSMC4-204	ENST00000596386	ALKBH6	Q3KRA9	238 aa		13.42	□□□□□ -0.26
PSMC4-204	ENST00000596386	METTL21C	Q5VZV1	264 aa		13.42	□□□□□ -0.26
PSMC4-204	ENST00000596386	NANOGP8	Q6NSW7	305 aa		13.42	□□□□□ -0.26
PSMC4-204	ENST00000596386	RBM15B	Q8NDT2	890 aa	Known RBP	13.42	□□□□□ -0.26
PSMC4-204	ENST00000596386	OR1J2	Q8NGS2	313 aa		13.42	□□□□□ -0.26
PSMC4-204	ENST00000596386	ZNF519	Q8TB69	540 aa		13.42	□□□□□ -0.26
PSMC4-204	ENST00000596386	SYNPR	Q8TBG9	265 aa		13.42	□□□□□ -0.26
PSMC4-204	ENST00000596386	ASB10	Q8WXI3	467 aa		13.42	□□□□□ -0.26
PSMC4-204	ENST00000596386	TMEM186	Q96B77	213 aa		13.42	□□□□□ -0.26
PSMC4-204	ENST00000596386	OR51B6	Q9H340	312 aa		13.42	□□□□□ -0.26
PSMC4-204	ENST00000596386	NANOG	Q9H9S0	305 aa		13.42	□□□□□ -0.26
PSMC4-204	ENST00000596386	HINT3	Q9NQE9	182 aa	Known RBP	13.42	□□□□□ -0.26
PSMC4-204	ENST00000596386	HIF1AN	Q9NWT6	349 aa		13.42	□□□□□ -0.26
PSMC4-204	ENST00000596386	TAAR3P	Q9P1P4	343 aa		13.42	□□□□□ -0.26
PSMC4-204	ENST00000596386	SH3GLB1	Q9Y371	365 aa		13.42	□□□□□ -0.26
PSMC4-204	ENST00000596386		A0A0G2JND7	137 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	IQCM	A0A1B0GVH7	501 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	FBP2	O00757	339 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	MGRN1	O60291	552 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	OR7A10	O76100	309 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	OR5F1	O95221	314 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	LCK	P06239	509 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	MMP7	P09237	267 aa	Predicted RBP	13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	GAA	P10253	952 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	RAD52	P43351	418 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	DAP3	P51398	398 aa	Known RBP	13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	ZNF133	P52736	654 aa	Predicted RBP	13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	TAS2R41	P59536	307 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	MYBPC1	Q00872	1141 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	PLP2	Q04941	152 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	CYLC2	Q14093	348 aa	Predicted RBP	13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	PCGF3	Q3KNV8	242 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	MMEL1	Q495T6	779 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	RABL3	Q5HYI8	236 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	C10orf128	Q5T292	105 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	TMEM154	Q6P9G4	183 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	DEF8	Q6ZN54	512 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	CALHM3	Q86XJ0	350 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	NKAIN4	Q8IVV8	208 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	SYT14	Q8NB59	555 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	OR8J3	Q8NGG0	315 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	PFN4	Q8NHR9	129 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	TMEM255B	Q8WV15	326 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	SNX33	Q8WV41	574 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	C11orf40	Q8WZ69	217 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	TSPAN32	Q96QS1	320 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	SH3GL1	Q99961	368 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	BCL2L14	Q9BZR8	327 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	POLR2J2	Q9GZM3	115 aa	Known RBP	13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	POLR2J3	Q9H1A7	115 aa	Known RBP	13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	LRMDA	Q9H2I8	198 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	LPAR2	Q9HBW0	351 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	INIP	Q9NRY2	104 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	C20orf141	Q9NUB4	165 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	SLCO1C1	Q9NYB5	712 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	TREM2	Q9NZC2	230 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	METRN	Q9UJH8	293 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	BAG5	Q9UL15	447 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	GRIP1	Q9Y3R0	1128 aa		13.41	□□□□□ -0.26
PSMC4-204	ENST00000596386	FXYD1	O00168	92 aa		13.4	□□□□□ -0.26
PSMC4-204	ENST00000596386	TRMU	O75648	421 aa	Known RBP	13.4	□□□□□ -0.26
PSMC4-204	ENST00000596386	TSPAN19	P0C672	248 aa		13.4	□□□□□ -0.26
PSMC4-204	ENST00000596386	ACADS	P16219	412 aa		13.4	□□□□□ -0.26
PSMC4-204	ENST00000596386	FUT1	P19526	365 aa		13.4	□□□□□ -0.26
PSMC4-204	ENST00000596386	TNFRSF1B	P20333	461 aa		13.4	□□□□□ -0.26
PSMC4-204	ENST00000596386	AQP2	P41181	271 aa		13.4	□□□□□ -0.26
PSMC4-204	ENST00000596386	UCP2	P55851	309 aa		13.4	□□□□□ -0.26
PSMC4-204	ENST00000596386	LMO4	P61968	165 aa		13.4	□□□□□ -0.26
PSMC4-204	ENST00000596386	CCL8	P80075	99 aa		13.4	□□□□□ -0.26
PSMC4-204	ENST00000596386	LRRC18	Q8N456	261 aa		13.4	□□□□□ -0.26
PSMC4-204	ENST00000596386	OR51F2	Q8NH61	342 aa		13.4	□□□□□ -0.26
PSMC4-204	ENST00000596386	TMEM239	Q8WW34	195 aa		13.4	□□□□□ -0.26
PSMC4-204	ENST00000596386	LIPH	Q8WWY8	451 aa		13.4	□□□□□ -0.26
PSMC4-204	ENST00000596386	SGTB	Q96EQ0	304 aa		13.4	□□□□□ -0.26
PSMC4-204	ENST00000596386	METTL17	Q9H7H0	456 aa	Predicted RBP	13.4	□□□□□ -0.26
PSMC4-204	ENST00000596386	SIAE	Q9HAT2	523 aa		13.4	□□□□□ -0.26
PSMC4-204	ENST00000596386	SMURF2	Q9HAU4	748 aa		13.4	□□□□□ -0.26
PSMC4-204	ENST00000596386	NKIRAS2	Q9NYR9	191 aa		13.4	□□□□□ -0.26
PSMC4-204	ENST00000596386	STX18	Q9P2W9	335 aa	Known RBP	13.4	□□□□□ -0.26
PSMC4-204	ENST00000596386	RIMS3	Q9UJD0	308 aa		13.4	□□□□□ -0.26
PSMC4-204	ENST00000596386	NPIPB13	A6NJU9	1138 aa		13.39	□□□□□ -0.27
PSMC4-204	ENST00000596386	NPIPB4	C9JG80	1138 aa		13.39	□□□□□ -0.27
PSMC4-204	ENST00000596386	SLC2A10	O95528	541 aa		13.39	□□□□□ -0.27
PSMC4-204	ENST00000596386	APLNR	P35414	380 aa		13.39	□□□□□ -0.27
PSMC4-204	ENST00000596386	MRPS34	P82930	218 aa	Known RBP	13.39	□□□□□ -0.27
PSMC4-204	ENST00000596386	HSF2	Q03933	536 aa		13.39	□□□□□ -0.27
PSMC4-204	ENST00000596386	PIN1	Q13526	163 aa	Predicted RBP	13.39	□□□□□ -0.27
PSMC4-204	ENST00000596386	COQ5	Q5HYK3	327 aa		13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms