RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 C3orf49Q96BT1 292 aa11.35□□□□□ -0.59
SCAF1-202ENST00000595242 EFHD2Q96C19 240 aaPredicted RBP11.35□□□□□ -0.59
SCAF1-202ENST00000595242 ZNF845Q96IR2 970 aaPredicted RBP11.35□□□□□ -0.59
SCAF1-202ENST00000595242 SAMD8Q96LT4 415 aa11.35□□□□□ -0.59
SCAF1-202ENST00000595242 TNFRSF13CQ96RJ3 184 aa11.35□□□□□ -0.59
SCAF1-202ENST00000595242 MND1Q9BWT6 205 aa11.35□□□□□ -0.59
SCAF1-202ENST00000595242 RPS6KB2Q9UBS0 482 aa11.35□□□□□ -0.59
SCAF1-202ENST00000595242 IGHV4-30-2A0A087WSY4 118 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 SLC22A20A6NK97 555 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 EFCAB9A8MZ26 197 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 SCDO00767 359 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 HCRTR2O43614 444 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 NDUFS7O75251 213 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 PPM1BO75688 479 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 DANCRP0C864 163 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 CD8BP10966 210 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 PPP3CBP16298 524 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 ZNF708P17019 499 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 SLC9A3P48764 834 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 TMED10P49755 219 aaKnown RBP11.34□□□□□ -0.59
SCAF1-202ENST00000595242 RGS6P49758 472 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 LHX2P50458 406 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 RNF144AP50876 292 aaPredicted RBP11.34□□□□□ -0.59
SCAF1-202ENST00000595242 GFRA1P56159 465 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 CLDN18P56856 261 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 TMED1Q13445 227 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 FHL1Q13642 323 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 CD226Q15762 336 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 ARMCX4Q5H9R4 360 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 ARMC4Q5T2S8 1044 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 WBP2NLQ6ICG8 309 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 SMARCD3Q6STE5 483 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 BCDIN3DQ7Z5W3 292 aaKnown RBP11.34□□□□□ -0.59
SCAF1-202ENST00000595242 GID4Q8IVV7 300 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 DYNC2LI1Q8TCX1 351 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 LIPHQ8WWY8 451 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 LGALS12Q96DT0 336 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 OR5M11Q96RB7 305 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 MGLLQ99685 303 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 TMEM43Q9BTV4 400 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 LAT2Q9GZY6 243 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 ESRP2Q9H6T0 727 aaKnown RBP11.34□□□□□ -0.59
SCAF1-202ENST00000595242 ISYNA1Q9NPH2 558 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 TAS2R16Q9NYV7 291 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 GDF2Q9UK05 429 aaPredicted RBP11.34□□□□□ -0.59
SCAF1-202ENST00000595242 ERGIC3Q9Y282 383 aa11.34□□□□□ -0.59
SCAF1-202ENST00000595242 EXOGQ9Y2C4 368 aaKnown RBP11.34□□□□□ -0.59
SCAF1-202ENST00000595242 A0A096LNT2 108 aa11.33□□□□□ -0.6
SCAF1-202ENST00000595242 TMEM129A0AVI4 362 aa11.33□□□□□ -0.6
SCAF1-202ENST00000595242 C2orf72A6NCS6 295 aa11.33□□□□□ -0.6
SCAF1-202ENST00000595242 ALG1L2C9J202 215 aa11.33□□□□□ -0.6
SCAF1-202ENST00000595242 ZNF264O43296 627 aa11.33□□□□□ -0.6
SCAF1-202ENST00000595242 EIF4E2O60573 245 aaKnown RBP11.33□□□□□ -0.6
SCAF1-202ENST00000595242 CLPXO76031 633 aa11.33□□□□□ -0.6
SCAF1-202ENST00000595242 SCG5P05408 212 aa11.33□□□□□ -0.6
SCAF1-202ENST00000595242 PNMTP11086 282 aa11.33□□□□□ -0.6
SCAF1-202ENST00000595242 HTR1FP30939 366 aa11.33□□□□□ -0.6
SCAF1-202ENST00000595242 SLC6A8P48029 635 aa11.33□□□□□ -0.6
SCAF1-202ENST00000595242 MTNR1AP48039 350 aa11.33□□□□□ -0.6
SCAF1-202ENST00000595242 MLLT11Q13015 90 aaPredicted RBP11.33□□□□□ -0.6
SCAF1-202ENST00000595242 CLEC12AQ5QGZ9 265 aa11.33□□□□□ -0.6
SCAF1-202ENST00000595242 HLA-DQA1Q5Y7H0 255 aa11.33□□□□□ -0.6
SCAF1-202ENST00000595242 ADAM5Q6NVV9 412 aa11.33□□□□□ -0.6
SCAF1-202ENST00000595242 C12orf54Q6X4T0 127 aa11.33□□□□□ -0.6
SCAF1-202ENST00000595242 CHMP1BQ7LBR1 199 aa11.33□□□□□ -0.6
SCAF1-202ENST00000595242 ATG4DQ86TL0 474 aaPredicted RBP11.33□□□□□ -0.6
SCAF1-202ENST00000595242 WFDC8Q8IUA0 241 aa11.33□□□□□ -0.6
SCAF1-202ENST00000595242 OR13C2Q8NGS9 318 aa11.33□□□□□ -0.6
SCAF1-202ENST00000595242 LILRB1Q8NHL6 650 aaPredicted RBP11.33□□□□□ -0.6
SCAF1-202ENST00000595242 SMAP2Q8WU79 429 aaPredicted RBP11.33□□□□□ -0.6
SCAF1-202ENST00000595242 FBXW5Q969U6 566 aa11.33□□□□□ -0.6
SCAF1-202ENST00000595242 PLEKHA8Q96JA3 519 aa11.33□□□□□ -0.6
SCAF1-202ENST00000595242 OPALINQ96PE5 141 aa11.33□□□□□ -0.6
SCAF1-202ENST00000595242 OR2B2Q9GZK3 357 aa11.33□□□□□ -0.6
SCAF1-202ENST00000595242 ADAM19Q9H013 955 aa11.33□□□□□ -0.6
SCAF1-202ENST00000595242 METTL7AQ9H8H3 244 aa11.33□□□□□ -0.6
SCAF1-202ENST00000595242 HINT3Q9NQE9 182 aaKnown RBP11.33□□□□□ -0.6
SCAF1-202ENST00000595242 CMC2Q9NRP2 79 aa11.33□□□□□ -0.6
SCAF1-202ENST00000595242 EXOSC1Q9Y3B2 195 aaKnown RBP11.33□□□□□ -0.6
SCAF1-202ENST00000595242 M0R3G1 203 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 CCRL2O00421 344 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 OIP5O43482 229 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 AIREO43918 545 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 SSX4O60224 188 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 LMX1BO60663 402 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 ICOSLGO75144 302 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 CBR3O75828 277 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 IGHA1P01876 353 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 GADD45AP24522 165 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 SLC6A6P31641 620 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 CDH11P55287 796 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 NRG3P56975 720 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 COPZ1P61923 177 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 TUBA1BP68363 451 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 PLCXD2Q0VAA5 305 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 FAPQ12884 760 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 DOC2BQ14184 412 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 SPHARQ15513 63 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 MOGQ16653 247 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 NDUFAF6Q330K2 333 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms