RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 MT-ATP6P00846 226 aa12.63□□□□□ -0.39
PNKP-202ENST00000593706 ADORA3P0DMS8 318 aa12.63□□□□□ -0.39
PNKP-202ENST00000593706 GAAP10253 952 aa12.63□□□□□ -0.39
PNKP-202ENST00000593706 COX4I1P13073 169 aa12.63□□□□□ -0.39
PNKP-202ENST00000593706 TNFRSF1BP20333 461 aa12.63□□□□□ -0.39
PNKP-202ENST00000593706 ZNF74Q16587 644 aa12.63□□□□□ -0.39
PNKP-202ENST00000593706 FXNQ16595 210 aa12.63□□□□□ -0.39
PNKP-202ENST00000593706 ALKBH6Q3KRA9 238 aa12.63□□□□□ -0.39
PNKP-202ENST00000593706 FAHD2BQ6P2I3 314 aaPredicted RBP12.63□□□□□ -0.39
PNKP-202ENST00000593706 PXKQ7Z7A4 578 aa12.63□□□□□ -0.39
PNKP-202ENST00000593706 SLC15A3Q8IY34 581 aa12.63□□□□□ -0.39
PNKP-202ENST00000593706 OR2T12Q8NG77 320 aa12.63□□□□□ -0.39
PNKP-202ENST00000593706 SNX33Q8WV41 574 aa12.63□□□□□ -0.39
PNKP-202ENST00000593706 YIPF5Q969M3 257 aa12.63□□□□□ -0.39
PNKP-202ENST00000593706 FAHD2AQ96GK7 314 aa12.63□□□□□ -0.39
PNKP-202ENST00000593706 MPP4Q96JB8 637 aa12.63□□□□□ -0.39
PNKP-202ENST00000593706 SLC19A3Q9BZV2 496 aa12.63□□□□□ -0.39
PNKP-202ENST00000593706 MEPEQ9NQ76 525 aaPredicted RBP12.63□□□□□ -0.39
PNKP-202ENST00000593706 SLC7A7Q9UM01 511 aa12.63□□□□□ -0.39
PNKP-202ENST00000593706 TRAV20A0A0B4J274 112 aa12.62□□□□□ -0.39
PNKP-202ENST00000593706 NME4O00746 187 aa12.62□□□□□ -0.39
PNKP-202ENST00000593706 WNT9BO14905 357 aa12.62□□□□□ -0.39
PNKP-202ENST00000593706 SPRY1O43609 319 aaPredicted RBP12.62□□□□□ -0.39
PNKP-202ENST00000593706 CCDC22O60826 627 aa12.62□□□□□ -0.39
PNKP-202ENST00000593706 ENTPD5O75356 428 aa12.62□□□□□ -0.39
PNKP-202ENST00000593706 DRD4P21917 467 aa12.62□□□□□ -0.39
PNKP-202ENST00000593706 BIDP55957 195 aa12.62□□□□□ -0.39
PNKP-202ENST00000593706 TMEM33P57088 247 aa12.62□□□□□ -0.39
PNKP-202ENST00000593706 SELENOVP59797 346 aa12.62□□□□□ -0.39
PNKP-202ENST00000593706 MRPS11P82912 194 aaKnown RBP12.62□□□□□ -0.39
PNKP-202ENST00000593706 CYBRD1Q53TN4 286 aa12.62□□□□□ -0.39
PNKP-202ENST00000593706 RGS7BPQ6MZT1 257 aaPredicted RBP12.62□□□□□ -0.39
PNKP-202ENST00000593706 HACD2Q6Y1H2 254 aa12.62□□□□□ -0.39
PNKP-202ENST00000593706 ARPINQ7Z6K5 226 aa12.62□□□□□ -0.39
PNKP-202ENST00000593706 MICU2Q8IYU8 434 aa12.62□□□□□ -0.39
PNKP-202ENST00000593706 TEX29Q8N6K0 151 aa12.62□□□□□ -0.39
PNKP-202ENST00000593706 C3orf56Q8N813 242 aa12.62□□□□□ -0.39
PNKP-202ENST00000593706 ZMYND19Q96E35 227 aaPredicted RBP12.62□□□□□ -0.39
PNKP-202ENST00000593706 POLR2J2Q9GZM3 115 aaKnown RBP12.62□□□□□ -0.39
PNKP-202ENST00000593706 RACGAP1Q9H0H5 632 aa12.62□□□□□ -0.39
PNKP-202ENST00000593706 POLR2J3Q9H1A7 115 aaKnown RBP12.62□□□□□ -0.39
PNKP-202ENST00000593706 OR51B6Q9H340 312 aa12.62□□□□□ -0.39
PNKP-202ENST00000593706 GPR160Q9UJ42 338 aa12.62□□□□□ -0.39
PNKP-202ENST00000593706 BAG5Q9UL15 447 aa12.62□□□□□ -0.39
PNKP-202ENST00000593706 CDC14BO60729 498 aa12.61□□□□□ -0.39
PNKP-202ENST00000593706 FARS2O95363 451 aaKnown RBP12.61□□□□□ -0.39
PNKP-202ENST00000593706 SERPINA5P05154 406 aa12.61□□□□□ -0.39
PNKP-202ENST00000593706 ASAH2BP0C7U1 165 aa12.61□□□□□ -0.39
PNKP-202ENST00000593706 PATE4P0C8F1 98 aa12.61□□□□□ -0.39
PNKP-202ENST00000593706 FAM157BP0CG42 384 aa12.61□□□□□ -0.39
PNKP-202ENST00000593706 EPHA1P21709 976 aa12.61□□□□□ -0.39
PNKP-202ENST00000593706 KDELR2P33947 212 aa12.61□□□□□ -0.39
PNKP-202ENST00000593706 MAGEB1P43366 347 aa12.61□□□□□ -0.39
PNKP-202ENST00000593706 KLF3P57682 345 aaPredicted RBP12.61□□□□□ -0.39
PNKP-202ENST00000593706 TMEM154Q6P9G4 183 aa12.61□□□□□ -0.39
PNKP-202ENST00000593706 PIWIL3Q7Z3Z3 882 aaKnown RBP12.61□□□□□ -0.39
PNKP-202ENST00000593706 ZNF584Q8IVC4 421 aa12.61□□□□□ -0.39
PNKP-202ENST00000593706 SKA3Q8IX90 412 aa12.61□□□□□ -0.39
PNKP-202ENST00000593706 LRRC17Q8N6Y2 441 aa12.61□□□□□ -0.39
PNKP-202ENST00000593706 SLC30A7Q8NEW0 376 aa12.61□□□□□ -0.39
PNKP-202ENST00000593706 OR5J2Q8NH18 312 aa12.61□□□□□ -0.39
PNKP-202ENST00000593706 SLC26A7Q8TE54 656 aa12.61□□□□□ -0.39
PNKP-202ENST00000593706 GCDHQ92947 438 aaPredicted RBP12.61□□□□□ -0.39
PNKP-202ENST00000593706 ELAC2Q9BQ52 826 aaKnown RBP12.61□□□□□ -0.39
PNKP-202ENST00000593706 CDH20Q9HBT6 801 aa12.61□□□□□ -0.39
PNKP-202ENST00000593706 TAS2R5Q9NYW4 299 aa12.61□□□□□ -0.39
PNKP-202ENST00000593706 TAAR3PQ9P1P4 343 aa12.61□□□□□ -0.39
PNKP-202ENST00000593706 ABCD2Q9UBJ2 740 aa12.61□□□□□ -0.39
PNKP-202ENST00000593706 PCDHB10Q9UN67 800 aa12.61□□□□□ -0.39
PNKP-202ENST00000593706 SH3GLB1Q9Y371 365 aa12.61□□□□□ -0.39
PNKP-202ENST00000593706 ELOVL7A1L3X0 281 aa12.6□□□□□ -0.39
PNKP-202ENST00000593706 TRIM77I1YAP6 450 aa12.6□□□□□ -0.39
PNKP-202ENST00000593706 SNX3O60493 162 aa12.6□□□□□ -0.39
PNKP-202ENST00000593706 SHOX2O60902 331 aaPredicted RBP12.6□□□□□ -0.39
PNKP-202ENST00000593706 RP2O75695 350 aa12.6□□□□□ -0.39
PNKP-202ENST00000593706 OR5F1O95221 314 aa12.6□□□□□ -0.39
PNKP-202ENST00000593706 IGF2P01344 180 aa12.6□□□□□ -0.39
PNKP-202ENST00000593706 LCKP06239 509 aa12.6□□□□□ -0.39
PNKP-202ENST00000593706 OR8G3PP0DMU2 310 aa12.6□□□□□ -0.39
PNKP-202ENST00000593706 ANPEPP15144 967 aa12.6□□□□□ -0.39
PNKP-202ENST00000593706 FUT4P22083 530 aa12.6□□□□□ -0.39
PNKP-202ENST00000593706 RBM34P42696 430 aaKnown RBP12.6□□□□□ -0.39
PNKP-202ENST00000593706 OR1E2P47887 323 aa12.6□□□□□ -0.39
PNKP-202ENST00000593706 SLC7A2P52569 658 aa12.6□□□□□ -0.39
PNKP-202ENST00000593706 UGT2B15P54855 530 aa12.6□□□□□ -0.39
PNKP-202ENST00000593706 CCL8P80075 99 aa12.6□□□□□ -0.39
PNKP-202ENST00000593706 MYBPC1Q00872 1141 aa12.6□□□□□ -0.39
PNKP-202ENST00000593706 LIPEQ05469 1076 aa12.6□□□□□ -0.39
PNKP-202ENST00000593706 ZP4Q12836 540 aa12.6□□□□□ -0.39
PNKP-202ENST00000593706 LRRC23Q53EV4 343 aaPredicted RBP12.6□□□□□ -0.39
PNKP-202ENST00000593706 AVPI1Q5T686 147 aa12.6□□□□□ -0.39
PNKP-202ENST00000593706 TMEM53Q6P2H8 277 aa12.6□□□□□ -0.39
PNKP-202ENST00000593706 SLC35D2Q76EJ3 337 aa12.6□□□□□ -0.39
PNKP-202ENST00000593706 SLC22A24Q8N4F4 322 aa12.6□□□□□ -0.39
PNKP-202ENST00000593706 ICA1LQ8NDH6 482 aa12.6□□□□□ -0.39
PNKP-202ENST00000593706 ZNF566Q969W8 418 aa12.6□□□□□ -0.39
PNKP-202ENST00000593706 RAB39BQ96DA2 213 aa12.6□□□□□ -0.39
PNKP-202ENST00000593706 C1orf198Q9H425 327 aa12.6□□□□□ -0.39
PNKP-202ENST00000593706 ZNF665Q9H7R5 613 aa12.6□□□□□ -0.39
PNKP-202ENST00000593706 RNF121Q9H920 327 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms