RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 MCHR2Q969V1 340 aa13.93□□□□□ -0.18
LIG1-205ENST00000593425 ZNF347Q96SE7 839 aa13.93□□□□□ -0.18
LIG1-205ENST00000593425 ZNF426Q9BUY5 554 aa13.93□□□□□ -0.18
LIG1-205ENST00000593425 C1orf198Q9H425 327 aa13.93□□□□□ -0.18
LIG1-205ENST00000593425 NKIRAS2Q9NYR9 191 aa13.93□□□□□ -0.18
LIG1-205ENST00000593425 ZNF229Q9UJW7 825 aa13.93□□□□□ -0.18
LIG1-205ENST00000593425 SLC7A7Q9UM01 511 aa13.93□□□□□ -0.18
LIG1-205ENST00000593425 TRIM33Q9UPN9 1127 aa13.93□□□□□ -0.18
LIG1-205ENST00000593425 WIPI2Q9Y4P8 454 aa13.93□□□□□ -0.18
LIG1-205ENST00000593425 IGHV1-69-2A0A0G2JMI3 117 aa13.92□□□□□ -0.18
LIG1-205ENST00000593425 TRIM77I1YAP6 450 aa13.92□□□□□ -0.18
LIG1-205ENST00000593425 ENTPD5O75356 428 aa13.92□□□□□ -0.18
LIG1-205ENST00000593425 ERLIN1O75477 346 aa13.92□□□□□ -0.18
LIG1-205ENST00000593425 IGHV2-5P01817 119 aa13.92□□□□□ -0.18
LIG1-205ENST00000593425 MMP7P09237 267 aaPredicted RBP13.92□□□□□ -0.18
LIG1-205ENST00000593425 UMPSP11172 480 aa13.92□□□□□ -0.18
LIG1-205ENST00000593425 EGR1P18146 543 aa13.92□□□□□ -0.18
LIG1-205ENST00000593425 ADRA2CP18825 462 aa13.92□□□□□ -0.18
LIG1-205ENST00000593425 CD247P20963 164 aa13.92□□□□□ -0.18
LIG1-205ENST00000593425 UCP2P55851 309 aa13.92□□□□□ -0.18
LIG1-205ENST00000593425 CLRN1P58418 232 aa13.92□□□□□ -0.18
LIG1-205ENST00000593425 MTPNP58546 118 aa13.92□□□□□ -0.18
LIG1-205ENST00000593425 SELENOVP59797 346 aa13.92□□□□□ -0.18
LIG1-205ENST00000593425 HIST3H3Q16695 136 aa13.92□□□□□ -0.18
LIG1-205ENST00000593425 TSTQ16762 297 aaKnown RBP13.92□□□□□ -0.18
LIG1-205ENST00000593425 TMEM255AQ5JRV8 349 aa13.92□□□□□ -0.18
LIG1-205ENST00000593425 USP51Q70EK9 711 aa13.92□□□□□ -0.18
LIG1-205ENST00000593425 C1QL2Q7Z5L3 287 aa13.92□□□□□ -0.18
LIG1-205ENST00000593425 RBM15BQ8NDT2 890 aaKnown RBP13.92□□□□□ -0.18
LIG1-205ENST00000593425 NOXO1Q8NFA2 376 aa13.92□□□□□ -0.18
LIG1-205ENST00000593425 C11orf40Q8WZ69 217 aa13.92□□□□□ -0.18
LIG1-205ENST00000593425 GCDHQ92947 438 aaPredicted RBP13.92□□□□□ -0.18
LIG1-205ENST00000593425 PRSS27Q9BQR3 290 aa13.92□□□□□ -0.18
LIG1-205ENST00000593425 BCL2L14Q9BZR8 327 aa13.92□□□□□ -0.18
LIG1-205ENST00000593425 SLCO1C1Q9NYB5 712 aa13.92□□□□□ -0.18
LIG1-205ENST00000593425 GPR160Q9UJ42 338 aa13.92□□□□□ -0.18
LIG1-205ENST00000593425 TANC2Q9HCD6 1990 aa13.92□□□□□ -0.18
LIG1-205ENST00000593425 A0A0G2JMP0 313 aa13.91□□□□□ -0.18
LIG1-205ENST00000593425 A0A0X1KG70 313 aa13.91□□□□□ -0.18
LIG1-205ENST00000593425 TRAPPC13A5PLN9 417 aa13.91□□□□□ -0.18
LIG1-205ENST00000593425 BCL10O95999 233 aa13.91□□□□□ -0.18
LIG1-205ENST00000593425 IGHG1P01857 330 aa13.91□□□□□ -0.18
LIG1-205ENST00000593425 ANPEPP15144 967 aa13.91□□□□□ -0.18
LIG1-205ENST00000593425 ATP4BP51164 291 aa13.91□□□□□ -0.18
LIG1-205ENST00000593425 CYP51A1Q16850 503 aa13.91□□□□□ -0.18
LIG1-205ENST00000593425 MMEL1Q495T6 779 aa13.91□□□□□ -0.18
LIG1-205ENST00000593425 NRN1LQ496H8 165 aa13.91□□□□□ -0.18
LIG1-205ENST00000593425 NANOGNBQ7Z5D8 188 aa13.91□□□□□ -0.18
LIG1-205ENST00000593425 DPPA2Q7Z7J5 298 aa13.91□□□□□ -0.18
LIG1-205ENST00000593425 DHDDSQ86SQ9 333 aa13.91□□□□□ -0.18
LIG1-205ENST00000593425 LRRC18Q8N456 261 aa13.91□□□□□ -0.18
LIG1-205ENST00000593425 C3orf56Q8N813 242 aa13.91□□□□□ -0.18
LIG1-205ENST00000593425 OR4M2Q8NGB6 313 aa13.91□□□□□ -0.18
LIG1-205ENST00000593425 OR1J2Q8NGS2 313 aa13.91□□□□□ -0.18
LIG1-205ENST00000593425 OR1J1Q8NGS3 322 aa13.91□□□□□ -0.18
LIG1-205ENST00000593425 TAMM41Q96BW9 452 aa13.91□□□□□ -0.18
LIG1-205ENST00000593425 RAB39BQ96DA2 213 aa13.91□□□□□ -0.18
LIG1-205ENST00000593425 SEPHS2Q99611 448 aa13.91□□□□□ -0.18
LIG1-205ENST00000593425 SLC6A7Q99884 636 aa13.91□□□□□ -0.18
LIG1-205ENST00000593425 MRPL13Q9BYD1 178 aaKnown RBP13.91□□□□□ -0.18
LIG1-205ENST00000593425 ESM1Q9NQ30 184 aa13.91□□□□□ -0.18
LIG1-205ENST00000593425 MEPEQ9NQ76 525 aaPredicted RBP13.91□□□□□ -0.18
LIG1-205ENST00000593425 TENM1Q9UKZ4 2725 aa13.91□□□□□ -0.18
LIG1-205ENST00000593425 IQCMA0A1B0GVH7 501 aa13.9□□□□□ -0.18
LIG1-205ENST00000593425 CLDN25C9JDP6 229 aa13.9□□□□□ -0.18
LIG1-205ENST00000593425 BLOC1S5-TXNDC5H3BN57 136 aa13.9□□□□□ -0.18
LIG1-205ENST00000593425 TPD52L2O43399 206 aaKnown RBP13.9□□□□□ -0.18
LIG1-205ENST00000593425 PTHP01270 115 aa13.9□□□□□ -0.18
LIG1-205ENST00000593425 IGHV3-13P01766 116 aa13.9□□□□□ -0.18
LIG1-205ENST00000593425 F13BP05160 661 aa13.9□□□□□ -0.18
LIG1-205ENST00000593425 MAKP20794 623 aa13.9□□□□□ -0.18
LIG1-205ENST00000593425 RAD52P43351 418 aa13.9□□□□□ -0.18
LIG1-205ENST00000593425 ZNF84P51523 738 aa13.9□□□□□ -0.18
LIG1-205ENST00000593425 TEKQ02763 1124 aa13.9□□□□□ -0.18
LIG1-205ENST00000593425 RPL18Q07020 188 aaKnown RBP13.9□□□□□ -0.18
LIG1-205ENST00000593425 ZNF771Q7L3S4 317 aaPredicted RBP13.9□□□□□ -0.18
LIG1-205ENST00000593425 RETREG3Q86VR2 466 aa13.9□□□□□ -0.18
LIG1-205ENST00000593425 TEX29Q8N6K0 151 aa13.9□□□□□ -0.18
LIG1-205ENST00000593425 SYT14Q8NB59 555 aa13.9□□□□□ -0.18
LIG1-205ENST00000593425 CPEB3Q8NE35 698 aaKnown RBP13.9□□□□□ -0.18
LIG1-205ENST00000593425 LRRC8CQ8TDW0 803 aa13.9□□□□□ -0.18
LIG1-205ENST00000593425 ASB10Q8WXI3 467 aa13.9□□□□□ -0.18
LIG1-205ENST00000593425 ZMYND19Q96E35 227 aaPredicted RBP13.9□□□□□ -0.18
LIG1-205ENST00000593425 MPP4Q96JB8 637 aa13.9□□□□□ -0.18
LIG1-205ENST00000593425 RBM4Q9BWF3 364 aaKnown RBP13.9□□□□□ -0.18
LIG1-205ENST00000593425 SLC19A3Q9BZV2 496 aa13.9□□□□□ -0.18
LIG1-205ENST00000593425 PCDHAC1Q9H158 963 aa13.9□□□□□ -0.18
LIG1-205ENST00000593425 SAP30LQ9HAJ7 183 aa13.9□□□□□ -0.18
LIG1-205ENST00000593425 DECR2Q9NUI1 292 aa13.9□□□□□ -0.18
LIG1-205ENST00000593425 LEF1Q9UJU2 399 aaPredicted RBP13.9□□□□□ -0.18
LIG1-205ENST00000593425 IGKV1D-43A0A0B4J1Z2 117 aa13.89□□□□□ -0.19
LIG1-205ENST00000593425 TRMUO75648 421 aaKnown RBP13.89□□□□□ -0.19
LIG1-205ENST00000593425 SLC2A10O95528 541 aa13.89□□□□□ -0.19
LIG1-205ENST00000593425 HIST1H2ABP04908 130 aa13.89□□□□□ -0.19
LIG1-205ENST00000593425 DRD4P21917 467 aa13.89□□□□□ -0.19
LIG1-205ENST00000593425 CCNOP22674 350 aa13.89□□□□□ -0.19
LIG1-205ENST00000593425 APLNRP35414 380 aa13.89□□□□□ -0.19
LIG1-205ENST00000593425 MPV17P39210 176 aa13.89□□□□□ -0.19
LIG1-205ENST00000593425 WNT5AP41221 380 aa13.89□□□□□ -0.19
LIG1-205ENST00000593425 CRYBA2P53672 197 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms