RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 GSTA2P09210 222 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 OR4E1P0C645 316 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 UBCP0CG48 685 aaKnown RBP3.99□□□□□ -1.77
SMAD4-216ENST00000593223 CALM1P0DP23 149 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 CALM2P0DP24 149 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 CALM3P0DP25 149 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 PSKH1P11801 424 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 ATF6P18850 670 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 PRPS1L1P21108 318 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 STK19P49842 368 aaPredicted RBP3.99□□□□□ -1.77
SMAD4-216ENST00000593223 PLK1P53350 603 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 UCNP55089 124 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 RAB4BP61018 213 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 BTG1P62324 171 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 ARF6P62330 175 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 OGDHQ02218 1023 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 MED21Q13503 144 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 PEX6Q13608 980 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 CYTH1Q15438 398 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 ZNF528Q3MIS6 628 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 SFT2D3Q587I9 215 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 ARMCX4Q5H9R4 360 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 MARCH8Q5T0T0 291 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 N4BP2L1Q5TBK1 243 aaPredicted RBP3.99□□□□□ -1.77
SMAD4-216ENST00000593223 CWC27Q6UX04 472 aaKnown RBP3.99□□□□□ -1.77
SMAD4-216ENST00000593223 PARGQ86W56 976 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 MMAAQ8IVH4 418 aaKnown RBP3.99□□□□□ -1.77
SMAD4-216ENST00000593223 CMTM8Q8IZV2 173 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 ZNF786Q8N393 782 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 CLDN19Q8N6F1 224 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 C8orf31Q8N9H6 132 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 CCDC197Q8NCU1 140 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 OR9Q2Q8NGE9 314 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 OR6M1Q8NGM8 313 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 OR4D5Q8NGN0 318 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 OR6Q1Q8NGQ2 317 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 OR2L2Q8NH16 312 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 NPRL2Q8WTW4 380 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 TMEM239Q8WW34 195 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 FAM3CQ92520 227 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 RASL10AQ92737 203 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 RPL3LQ92901 407 aaKnown RBP3.99□□□□□ -1.77
SMAD4-216ENST00000593223 CPNE4Q96A23 557 aaPredicted RBP3.99□□□□□ -1.77
SMAD4-216ENST00000593223 C10orf35Q96D05 121 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 DNAJC1Q96KC8 554 aaKnown RBP3.99□□□□□ -1.77
SMAD4-216ENST00000593223 B3GALT6Q96L58 329 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 JSRP1Q96MG2 331 aaPredicted RBP3.99□□□□□ -1.77
SMAD4-216ENST00000593223 OPALINQ96PE5 141 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 TAAR1Q96RJ0 339 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 CYP2S1Q96SQ9 504 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 CIB1Q99828 191 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 P2RY13Q9BPV8 354 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 SOSTQ9BQB4 213 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 IMP3Q9NV31 184 aaKnown RBP3.99□□□□□ -1.77
SMAD4-216ENST00000593223 MRPL39Q9NYK5 338 aaKnown RBP3.99□□□□□ -1.77
SMAD4-216ENST00000593223 PTTG3PQ9NZH4 202 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 LHX3Q9UBR4 397 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 CLN8Q9UBY8 286 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 SCML1Q9UN30 329 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 GSTK1Q9Y2Q3 226 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 KPTNQ9Y664 436 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 URGCP-MRPS24S4R325 110 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 FBN2P35556 2912 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 NEDD4P46934 1319 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 KALRNO60229 2985 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 IGHV4-30-2A0A087WSY4 118 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 KCNE1BA0A087WTH5 132 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 A0A1W2PNV4 684 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 GOLGA6L10A6NI86 522 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 NPIPA7E9PJI5 369 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 H0YJX3 145 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 DLGAP1O14490 977 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 MBTPS2O43462 519 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 LATO43561 262 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 ETHE1O95571 254 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 PRB1P04280 392 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 CD3GP09693 182 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 NPIPA8P0DM63 369 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 ATP1B2P14415 290 aaPredicted RBP3.98□□□□□ -1.77
SMAD4-216ENST00000593223 UQCRBP14927 111 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 NCK1P16333 377 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 BGNP21810 368 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 ALDH3A1P30838 453 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 CYLC1P35663 651 aaPredicted RBP3.98□□□□□ -1.77
SMAD4-216ENST00000593223 LIMK2P53671 638 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 PLA2G16P53816 162 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 ATP5J2P56134 94 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 RIPK4P57078 832 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 OR2B6P58173 313 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 KRTAP10-12P60413 245 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 ACTBP60709 375 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 RAB10P61026 200 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 ACTA2P62736 377 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 VSNL1P62760 191 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 HERVK_113P63132 956 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 ERVK-8P63133 956 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 ACTG1P63261 375 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 ACTG2P63267 376 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 ACTC1P68032 377 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 ACTA1P68133 377 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms