RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 MMP26Q9NRE1 261 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 CPNE7Q9UBL6 633 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 FOXD3Q9UJU5 478 aaPredicted RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 FBXL2Q9UKC9 423 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 GPR55Q9Y2T6 319 aaPredicted RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 MMACHCQ9Y4U1 282 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 MYLKQ15746 1914 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 TTC3P53804 2025 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 A0A1W2PP55 124 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 MFSD2BA6NFX1 497 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 MAGEB4O15481 346 aaPredicted RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 HCRTR2O43614 444 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 JTBO76095 146 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 NKX2-2O95096 273 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 FARS2O95363 451 aaKnown RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 HOXC4P09017 264 aaPredicted RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 SLC25A4P12235 298 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 HNRNPA2B1P22626 353 aaKnown RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 S100PP25815 95 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 GRPRP30550 384 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 NTSR1P30989 418 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 TNFRSF4P43489 277 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 CAMLGP49069 296 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 ARRB1P49407 418 aaPredicted RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 MAP2K6P52564 334 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 LIMK1P53667 647 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 FXYD6P3P58550 94 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 GPR85P60893 370 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 HERV-K104P61576 105 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 MFGE8Q08431 387 aaPredicted RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 PLA2G7Q13093 441 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 PPA1Q15181 289 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 LTB4RQ15722 352 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 PHF19Q5T6S3 580 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 SHEQ5VZ18 495 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 H3F3CQ6NXT2 135 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 MTFR2Q6P444 385 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 LRFN4Q6PJG9 635 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 SLC39A5Q6ZMH5 540 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 TRAPPC6BQ86SZ2 158 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 GKN2Q86XP6 184 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 OR4N5Q8IXE1 308 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 BAP18Q8IXM2 172 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 ZNF679Q8IYX0 411 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 SLC38A6Q8IZM9 456 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 FAM169BQ8N8A8 192 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 MRPL43Q8N983 215 aaKnown RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 OR51L1Q8NGJ5 315 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 OR14K1Q8NGZ2 314 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 PAQR8Q8TEZ7 354 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 KLK6Q92876 244 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 ZDHHC12Q96GR4 267 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 BTF3L4Q96K17 158 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 PDCD1LG2Q9BQ51 273 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 SLC2A4RGQ9NR83 387 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 PPP4R1LQ9P1A2 415 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 OPN4Q9UHM6 478 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 CA5BQ9Y2D0 317 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 PCDHGA9Q9Y5G4 932 aaKnown RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 TANC1Q9C0D5 1861 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 A0A087WUJ7 227 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 TTLL8A6PVC2 850 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 MPTX1A8MV57 137 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 TRIM77I1YAP6 450 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 HAX1O00165 279 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 SOX1O00570 391 aaPredicted RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 FCMRO60667 390 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 B4GALT2O60909 372 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 STK17BO94768 372 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 OR2A4O95047 310 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 ITGA5P08648 1049 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 GSTP1P09211 210 aaKnown RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 HOXB2P14652 356 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 MAKP20794 623 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 FKBP2P26885 142 aaKnown RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 AQP2P41181 271 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 ZNF41P51814 821 aaPredicted RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 POLR2HP52434 150 aaKnown RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 CRYBA2P53672 197 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 HSD17B7P56937 341 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 NTHL1P78549 312 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 ZNF85Q03923 595 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 PLCXD2Q0VAA5 305 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 SSPNQ14714 243 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 PNLIPRP3Q17RR3 467 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 NHLRC3Q5JS37 347 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 PWWP2BQ6NUJ5 590 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 KIAA0907Q7Z7F0 614 aaPredicted RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 ARHGEF39Q8N4T4 335 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 ZNF561Q8N587 486 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 ARRDC1Q8N5I2 433 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 OR4D11Q8NGI4 311 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 PTX4Q96A99 478 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 ORAI1Q96D31 301 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 SLC41A2Q96JW4 573 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 OR2A7Q96R45 310 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 LMF1Q96S06 567 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 SULT4A1Q9BR01 284 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 ZNF426Q9BUY5 554 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 EIF5A2Q9GZV4 153 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms