RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 CCDC28BQ9BUN5 200 aa6.31□□□□□ -1.4
VAT1-209ENST00000592388 SPATA5L1Q9BVQ7 753 aa6.31□□□□□ -1.4
VAT1-209ENST00000592388 OR51B6Q9H340 312 aa6.31□□□□□ -1.4
VAT1-209ENST00000592388 TMEM38AQ9H6F2 299 aa6.31□□□□□ -1.4
VAT1-209ENST00000592388 ZMAT3Q9HA38 289 aaKnown RBP6.31□□□□□ -1.4
VAT1-209ENST00000592388 TMEM27Q9HBJ8 222 aa6.31□□□□□ -1.4
VAT1-209ENST00000592388 MED4Q9NPJ6 270 aa6.31□□□□□ -1.4
VAT1-209ENST00000592388 MRPL39Q9NYK5 338 aaKnown RBP6.31□□□□□ -1.4
VAT1-209ENST00000592388 SELENONQ9NZV5 590 aa6.31□□□□□ -1.4
VAT1-209ENST00000592388 SLC13A4Q9UKG4 626 aa6.31□□□□□ -1.4
VAT1-209ENST00000592388 ANGPT4Q9Y264 503 aa6.31□□□□□ -1.4
VAT1-209ENST00000592388 POFUT2Q9Y2G5 429 aa6.31□□□□□ -1.4
VAT1-209ENST00000592388 MMP24Q9Y5R2 645 aa6.31□□□□□ -1.4
VAT1-209ENST00000592388 DNAH1Q9P2D7 4330 aa6.31□□□□□ -1.4
VAT1-209ENST00000592388 TENM2Q9NT68 2774 aa6.31□□□□□ -1.4
VAT1-209ENST00000592388 A0A0G2JMP0 313 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 A0A0X1KG70 313 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 LOC102725191A0A1B0GVB3 256 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 ZNF726A6NNF4 738 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 M0R233 179 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 CHP2O43745 196 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 CH25HO95992 272 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 TFP02787 698 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 FAM157BP0CG42 384 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 ADORA3P0DMS8 318 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 SAGP10523 405 aaPredicted RBP6.3□□□□□ -1.4
VAT1-209ENST00000592388 NAT2P11245 290 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 CCL2P13500 99 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 ZNF35P13682 527 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 HOXB1P14653 301 aaPredicted RBP6.3□□□□□ -1.4
VAT1-209ENST00000592388 TNFRSF1BP20333 461 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 CD247P20963 164 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 NR4A1P22736 598 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 PPIBP23284 216 aaKnown RBP6.3□□□□□ -1.4
VAT1-209ENST00000592388 GPR6P46095 362 aaPredicted RBP6.3□□□□□ -1.4
VAT1-209ENST00000592388 CRYBA2P53672 197 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 HNRNPA0Q13151 305 aaKnown RBP6.3□□□□□ -1.4
VAT1-209ENST00000592388 ZNF74Q16587 644 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 TAF9Q16594 264 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 RUNDC3AQ59EK9 446 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 ENTPD8Q5MY95 495 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 ELFN2Q5R3F8 820 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 KPRPQ5T749 579 aaPredicted RBP6.3□□□□□ -1.4
VAT1-209ENST00000592388 SAMD5Q5TGI4 173 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 NET1Q7Z628 596 aaPredicted RBP6.3□□□□□ -1.4
VAT1-209ENST00000592388 SKA3Q8IX90 412 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 BCL6BQ8N143 479 aaPredicted RBP6.3□□□□□ -1.4
VAT1-209ENST00000592388 C11orf65Q8NCR3 313 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 OR4M2Q8NGB6 313 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 OR5J2Q8NH18 312 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 ADAMTS16Q8TE57 1224 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 DYDC1Q8WWB3 177 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 GTF3AQ92664 365 aaKnown RBP6.3□□□□□ -1.4
VAT1-209ENST00000592388 YIPF5Q969M3 257 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 TAMM41Q96BW9 452 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 ZNF48Q96MX3 618 aaPredicted RBP6.3□□□□□ -1.4
VAT1-209ENST00000592388 ANKRD27Q96NW4 1050 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 TSPAN32Q96QS1 320 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 ZNF607Q96SK3 696 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 SH3GL3Q99963 347 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 TMEM43Q9BTV4 400 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 ZNF385DQ9H6B1 395 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 C7orf69Q9H7B7 122 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 B3GAT2Q9NPZ5 323 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 SLC7A7Q9UM01 511 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 CMAHPQ9Y471 501 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 NOX1Q9Y5S8 564 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 GMEB1Q9Y692 573 aa6.3□□□□□ -1.4
VAT1-209ENST00000592388 A0A1W2PPW3 197 aa6.29□□□□□ -1.4
VAT1-209ENST00000592388 PRORSD1PA6NEY8 169 aa6.29□□□□□ -1.4
VAT1-209ENST00000592388 EVPLLA8MZ36 301 aa6.29□□□□□ -1.4
VAT1-209ENST00000592388 M0QX08 132 aa6.29□□□□□ -1.4
VAT1-209ENST00000592388 RNF13O43567 381 aa6.29□□□□□ -1.4
VAT1-209ENST00000592388 ERLIN1O75477 346 aa6.29□□□□□ -1.4
VAT1-209ENST00000592388 SERPINB7O75635 380 aa6.29□□□□□ -1.4
VAT1-209ENST00000592388 UBL3O95164 117 aa6.29□□□□□ -1.4
VAT1-209ENST00000592388 MPZL1O95297 269 aa6.29□□□□□ -1.4
VAT1-209ENST00000592388 TGDSO95455 350 aa6.29□□□□□ -1.4
VAT1-209ENST00000592388 RAB36O95755 333 aa6.29□□□□□ -1.4
VAT1-209ENST00000592388 CLPTM1O96005 669 aa6.29□□□□□ -1.4
VAT1-209ENST00000592388 ERCC1P07992 297 aaPredicted RBP6.29□□□□□ -1.4
VAT1-209ENST00000592388 PAX7P23759 505 aa6.29□□□□□ -1.4
VAT1-209ENST00000592388 COL8A2P25067 703 aa6.29□□□□□ -1.4
VAT1-209ENST00000592388 GLRXP35754 106 aa6.29□□□□□ -1.4
VAT1-209ENST00000592388 MAGEB1P43366 347 aa6.29□□□□□ -1.4
VAT1-209ENST00000592388 ATP4BP51164 291 aa6.29□□□□□ -1.4
VAT1-209ENST00000592388 RAB1AP62820 205 aa6.29□□□□□ -1.4
VAT1-209ENST00000592388 CBX1P83916 185 aa6.29□□□□□ -1.4
VAT1-209ENST00000592388 MYBPC1Q00872 1141 aa6.29□□□□□ -1.4
VAT1-209ENST00000592388 COL10A1Q03692 680 aa6.29□□□□□ -1.4
VAT1-209ENST00000592388 GLO1Q04760 184 aa6.29□□□□□ -1.4
VAT1-209ENST00000592388 SF3A3Q12874 501 aaKnown RBP eCLIP6.29□□□□□ -1.4
VAT1-209ENST00000592388 SLC9A3R2Q15599 337 aa6.29□□□□□ -1.4
VAT1-209ENST00000592388 FXNQ16595 210 aa6.29□□□□□ -1.4
VAT1-209ENST00000592388 TRMT5Q32P41 509 aaKnown RBP6.29□□□□□ -1.4
VAT1-209ENST00000592388 SWT1Q5T5J6 900 aaKnown RBP6.29□□□□□ -1.4
VAT1-209ENST00000592388 GKAP1Q5VSY0 366 aaPredicted RBP6.29□□□□□ -1.4
VAT1-209ENST00000592388 OLFML2AQ68BL7 652 aa6.29□□□□□ -1.4
VAT1-209ENST00000592388 ZNF613Q6PF04 617 aa6.29□□□□□ -1.4
VAT1-209ENST00000592388 LRFN4Q6PJG9 635 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms