RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 GAB1Q13480 694 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 RUNX2Q13950 521 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 TMEM236Q5W0B7 351 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 SFRP4Q6FHJ7 346 aaPredicted RBP6.78□□□□□ -1.32
SMAD4-209ENST00000589941 PTRHD1Q6GMV3 140 aaKnown RBP6.78□□□□□ -1.32
SMAD4-209ENST00000589941 STAC2Q6ZMT1 411 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 DGAT2L6Q6ZPD8 337 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 TSEN54Q7Z6J9 526 aaKnown RBP6.78□□□□□ -1.32
SMAD4-209ENST00000589941 CCDC190Q86UF4 302 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 ZNF619Q8N2I2 560 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 MCFD2Q8NI22 146 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 ZNF721Q8TF20 911 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 UCN3Q969E3 161 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 ZHX1-C8orf76Q96EF9 292 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 ZNF845Q96IR2 970 aaPredicted RBP6.78□□□□□ -1.32
SMAD4-209ENST00000589941 FOPNLQ96NB1 174 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 HBEGFQ99075 208 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 TBCDQ9BTW9 1192 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 DUSP26Q9BV47 211 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 TRIM2Q9C040 744 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 ACTR6Q9GZN1 396 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 DCSTAMPQ9H295 470 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 RIBC2Q9H4K1 309 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 METTL17Q9H7H0 456 aaPredicted RBP6.78□□□□□ -1.32
SMAD4-209ENST00000589941 CXorf36Q9H7Y0 433 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 PRTFDC1Q9NRG1 225 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 EXD2Q9NVH0 621 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 SNX6Q9UNH7 406 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 C1orf226A1L170 272 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 EVPLLA8MZ36 301 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 C17orf105B2RV13 164 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 CLIC1O00299 241 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 RFXANKO14593 260 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 OXSR1O95747 527 aaPredicted RBP6.77□□□□□ -1.33
SMAD4-209ENST00000589941 FADS2O95864 444 aaKnown RBP6.77□□□□□ -1.33
SMAD4-209ENST00000589941 PDYNP01213 254 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 IFNA16P05015 189 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 LCKP06239 509 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 C8GP07360 202 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 TRAPPC2P0DI81 140 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 TRAPPC2BP0DI82 140 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 PIPP12273 146 aaPredicted RBP6.77□□□□□ -1.33
SMAD4-209ENST00000589941 APEHP13798 732 aaKnown RBP6.77□□□□□ -1.33
SMAD4-209ENST00000589941 HSD3B1P14060 373 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 TCEA1P23193 301 aaKnown RBP6.77□□□□□ -1.33
SMAD4-209ENST00000589941 SERPINB1P30740 379 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 LIPAP38571 399 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 PIK3CBP42338 1070 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 CASP3P42574 277 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 ALDH9A1P49189 494 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 HNMTP50135 292 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 FBXW4P57775 412 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 KCNJ10P78508 379 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 IFITM2Q01629 132 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 ID2Q02363 134 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 BSPH1Q075Z2 132 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 LRRC74AQ0VAA2 488 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 RAB32Q13637 225 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 GUSBP1Q15486 140 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 TSC22D1Q15714 1073 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 MPEG1Q2M385 716 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 NCMAPQ5T1S8 102 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 ATAD3BQ5T9A4 648 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 RNLSQ5VYX0 342 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 OR4F3Q6IEY1 312 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 CCDC80Q76M96 950 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 ZNF367Q7RTV3 350 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 PAGE2Q7Z2X7 111 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 C1orf52Q8N6N3 182 aaKnown RBP6.77□□□□□ -1.33
SMAD4-209ENST00000589941 MORN4Q8NDC4 146 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 ZNF540Q8NDQ6 660 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 OR8K3Q8NH51 312 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 OR14A16Q8NHC5 309 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 SETD6Q8TBK2 473 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 RPL3LQ92901 407 aaKnown RBP6.77□□□□□ -1.33
SMAD4-209ENST00000589941 MYDGFQ969H8 173 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 COL21A1Q96P44 957 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 CCDC32Q9BV29 185 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 CDCA4Q9BXL8 241 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 CCDC90BQ9GZT6 254 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 RACGAP1Q9H0H5 632 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 KLK15Q9H2R5 256 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 ESM1Q9NQ30 184 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 CCDC177Q9NQR7 707 aaPredicted RBP6.77□□□□□ -1.33
SMAD4-209ENST00000589941 KRT84Q9NSB2 600 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 TEX10Q9NXF1 929 aaPredicted RBP6.77□□□□□ -1.33
SMAD4-209ENST00000589941 THUMPD1Q9NXG2 353 aaKnown RBP6.77□□□□□ -1.33
SMAD4-209ENST00000589941 EHD3Q9NZN3 535 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 CNOT2Q9NZN8 540 aaKnown RBP6.77□□□□□ -1.33
SMAD4-209ENST00000589941 CNIH4Q9P003 139 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 PDP1Q9P0J1 537 aaPredicted RBP6.77□□□□□ -1.33
SMAD4-209ENST00000589941 MKLN1Q9UL63 735 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 CORO2BQ9UQ03 480 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 WBP11Q9Y2W2 641 aaKnown RBP6.77□□□□□ -1.33
SMAD4-209ENST00000589941 GRIP1Q9Y3R0 1128 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 ANGPTL3Q9Y5C1 460 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 PEX16Q9Y5Y5 336 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 CLCA3PQ9Y6N3 262 aa6.77□□□□□ -1.33
SMAD4-209ENST00000589941 SHISA9B4DS77 424 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 LOC110117498-PIK3R3F6TDL0 507 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms