RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 DPPA2Q7Z7J5 298 aa12.38□□□□□ -0.43
MBD1-220ENST00000589758 WDFY1Q8IWB7 410 aa12.38□□□□□ -0.43
MBD1-220ENST00000589758 SKA3Q8IX90 412 aa12.38□□□□□ -0.43
MBD1-220ENST00000589758 CDK20Q8IZL9 346 aa12.38□□□□□ -0.43
MBD1-220ENST00000589758 ZCCHC24Q8N2G6 241 aaKnown RBP12.38□□□□□ -0.43
MBD1-220ENST00000589758 SLC22A24Q8N4F4 322 aa12.38□□□□□ -0.43
MBD1-220ENST00000589758 LRRC17Q8N6Y2 441 aa12.38□□□□□ -0.43
MBD1-220ENST00000589758 HPS1Q92902 700 aa12.38□□□□□ -0.43
MBD1-220ENST00000589758 HSH2DQ96JZ2 352 aa12.38□□□□□ -0.43
MBD1-220ENST00000589758 ZNF224Q9NZL3 707 aa12.38□□□□□ -0.43
MBD1-220ENST00000589758 SLC7A8Q9UHI5 535 aa12.38□□□□□ -0.43
MBD1-220ENST00000589758 V9GYQ6 96 aa12.38□□□□□ -0.43
MBD1-220ENST00000589758 SLC22A23A1A5C7 686 aa12.37□□□□□ -0.43
MBD1-220ENST00000589758 CENPBD1B2RD01 187 aa12.37□□□□□ -0.43
MBD1-220ENST00000589758 PHF1O43189 567 aaPredicted RBP12.37□□□□□ -0.43
MBD1-220ENST00000589758 DHHO43323 396 aa12.37□□□□□ -0.43
MBD1-220ENST00000589758 MGRN1O60291 552 aa12.37□□□□□ -0.43
MBD1-220ENST00000589758 UBOX5O94941 541 aa12.37□□□□□ -0.43
MBD1-220ENST00000589758 IGHG1P01857 330 aa12.37□□□□□ -0.43
MBD1-220ENST00000589758 MT-ND1P03886 318 aa12.37□□□□□ -0.43
MBD1-220ENST00000589758 SERPINA5P05154 406 aa12.37□□□□□ -0.43
MBD1-220ENST00000589758 TACSTD2P09758 323 aa12.37□□□□□ -0.43
MBD1-220ENST00000589758 PGA4P0DJD7 388 aa12.37□□□□□ -0.43
MBD1-220ENST00000589758 PGA3P0DJD8 388 aa12.37□□□□□ -0.43
MBD1-220ENST00000589758 HSD17B1P14061 328 aa12.37□□□□□ -0.43
MBD1-220ENST00000589758 SRD5A1P18405 259 aa12.37□□□□□ -0.43
MBD1-220ENST00000589758 IGFBP5P24593 272 aa12.37□□□□□ -0.43
MBD1-220ENST00000589758 RBM34P42696 430 aaKnown RBP12.37□□□□□ -0.43
MBD1-220ENST00000589758 PIN1Q13526 163 aaPredicted RBP12.37□□□□□ -0.43
MBD1-220ENST00000589758 RAB39AQ14964 217 aa12.37□□□□□ -0.43
MBD1-220ENST00000589758 FXNQ16595 210 aa12.37□□□□□ -0.43
MBD1-220ENST00000589758 NRN1LQ496H8 165 aa12.37□□□□□ -0.43
MBD1-220ENST00000589758 IFI44LQ53G44 452 aa12.37□□□□□ -0.43
MBD1-220ENST00000589758 HDDC2Q7Z4H3 204 aa12.37□□□□□ -0.43
MBD1-220ENST00000589758 NANOGNBQ7Z5D8 188 aa12.37□□□□□ -0.43
MBD1-220ENST00000589758 PRSS27Q9BQR3 290 aa12.37□□□□□ -0.43
MBD1-220ENST00000589758 MRPL37Q9BZE1 423 aaKnown RBP12.37□□□□□ -0.43
MBD1-220ENST00000589758 C1orf198Q9H425 327 aa12.37□□□□□ -0.43
MBD1-220ENST00000589758 CHODLQ9H9P2 273 aa12.37□□□□□ -0.43
MBD1-220ENST00000589758 MEPEQ9NQ76 525 aaPredicted RBP12.37□□□□□ -0.43
MBD1-220ENST00000589758 TMEM38BQ9NVV0 291 aa12.37□□□□□ -0.43
MBD1-220ENST00000589758 REV1Q9UBZ9 1251 aa12.37□□□□□ -0.43
MBD1-220ENST00000589758 CD300AQ9UGN4 299 aa12.37□□□□□ -0.43
MBD1-220ENST00000589758 RPS6KA6Q9UK32 745 aa12.37□□□□□ -0.43
MBD1-220ENST00000589758 A0A1W2PRG6 482 aa12.36□□□□□ -0.43
MBD1-220ENST00000589758 BLOC1S5-TXNDC5H3BN57 136 aa12.36□□□□□ -0.43
MBD1-220ENST00000589758 OR5F1O95221 314 aa12.36□□□□□ -0.43
MBD1-220ENST00000589758 TGFAP01135 160 aa12.36□□□□□ -0.43
MBD1-220ENST00000589758 PTHP01270 115 aa12.36□□□□□ -0.43
MBD1-220ENST00000589758 IGF2P01344 180 aa12.36□□□□□ -0.43
MBD1-220ENST00000589758 IGFBP1P08833 259 aaPredicted RBP12.36□□□□□ -0.43
MBD1-220ENST00000589758 QDPRP09417 244 aa12.36□□□□□ -0.43
MBD1-220ENST00000589758 FUT1P19526 365 aa12.36□□□□□ -0.43
MBD1-220ENST00000589758 ZNF84P51523 738 aa12.36□□□□□ -0.43
MBD1-220ENST00000589758 CLRN1P58418 232 aa12.36□□□□□ -0.43
MBD1-220ENST00000589758 RIN1Q13671 783 aa12.36□□□□□ -0.43
MBD1-220ENST00000589758 MELKQ14680 651 aa12.36□□□□□ -0.43
MBD1-220ENST00000589758 FAM120AOSQ5T036 256 aa12.36□□□□□ -0.43
MBD1-220ENST00000589758 TMEM53Q6P2H8 277 aa12.36□□□□□ -0.43
MBD1-220ENST00000589758 LRFN4Q6PJG9 635 aa12.36□□□□□ -0.43
MBD1-220ENST00000589758 ARIH2OSQ8N7S6 290 aa12.36□□□□□ -0.43
MBD1-220ENST00000589758 STX18Q9P2W9 335 aaKnown RBP12.36□□□□□ -0.43
MBD1-220ENST00000589758 RHCGQ9UBD6 479 aa12.36□□□□□ -0.43
MBD1-220ENST00000589758 RIMS3Q9UJD0 308 aa12.36□□□□□ -0.43
MBD1-220ENST00000589758 SNX13Q9Y5W8 968 aa12.36□□□□□ -0.43
MBD1-220ENST00000589758 LRP5LA4QPB2 252 aa12.35□□□□□ -0.43
MBD1-220ENST00000589758 MCIDASD6RGH6 385 aa12.35□□□□□ -0.43
MBD1-220ENST00000589758 J3KTA2 159 aa12.35□□□□□ -0.43
MBD1-220ENST00000589758 ARPC2O15144 300 aa12.35□□□□□ -0.43
MBD1-220ENST00000589758 LILRA1O75019 489 aa12.35□□□□□ -0.43
MBD1-220ENST00000589758 OR7A10O76100 309 aa12.35□□□□□ -0.43
MBD1-220ENST00000589758 IFNW1P05000 195 aa12.35□□□□□ -0.43
MBD1-220ENST00000589758 PATE4P0C8F1 98 aa12.35□□□□□ -0.43
MBD1-220ENST00000589758 THRBP10828 461 aa12.35□□□□□ -0.43
MBD1-220ENST00000589758 DAP3P51398 398 aaKnown RBP12.35□□□□□ -0.43
MBD1-220ENST00000589758 RPL18Q07020 188 aaKnown RBP12.35□□□□□ -0.43
MBD1-220ENST00000589758 HIST3H3Q16695 136 aa12.35□□□□□ -0.43
MBD1-220ENST00000589758 SLC36A2Q495M3 483 aa12.35□□□□□ -0.43
MBD1-220ENST00000589758 ZNF584Q8IVC4 421 aa12.35□□□□□ -0.43
MBD1-220ENST00000589758 NKAIN4Q8IVV8 208 aa12.35□□□□□ -0.43
MBD1-220ENST00000589758 PHC2Q8IXK0 858 aa12.35□□□□□ -0.43
MBD1-220ENST00000589758 FAM86B1Q8N7N1 296 aa12.35□□□□□ -0.43
MBD1-220ENST00000589758 TMEM239Q8WW34 195 aa12.35□□□□□ -0.43
MBD1-220ENST00000589758 LIPHQ8WWY8 451 aa12.35□□□□□ -0.43
MBD1-220ENST00000589758 GEMIN6Q8WXD5 167 aaKnown RBP12.35□□□□□ -0.43
MBD1-220ENST00000589758 MCHR2Q969V1 340 aa12.35□□□□□ -0.43
MBD1-220ENST00000589758 SGTBQ96EQ0 304 aa12.35□□□□□ -0.43
MBD1-220ENST00000589758 SYT3Q9BQG1 590 aa12.35□□□□□ -0.43
MBD1-220ENST00000589758 REPIN1Q9BWE0 567 aaKnown RBP12.35□□□□□ -0.43
MBD1-220ENST00000589758 TPK1Q9H3S4 243 aa12.35□□□□□ -0.43
MBD1-220ENST00000589758 RNF121Q9H920 327 aa12.35□□□□□ -0.43
MBD1-220ENST00000589758 INIPQ9NRY2 104 aa12.35□□□□□ -0.43
MBD1-220ENST00000589758 DCAF13Q9NV06 445 aaKnown RBP12.35□□□□□ -0.43
MBD1-220ENST00000589758 GPR160Q9UJ42 338 aa12.35□□□□□ -0.43
MBD1-220ENST00000589758 MAGEL2Q9UJ55 1249 aa12.35□□□□□ -0.43
MBD1-220ENST00000589758 ZNF346Q9UL40 294 aaKnown RBP12.35□□□□□ -0.43
MBD1-220ENST00000589758 F13BP05160 661 aa12.34□□□□□ -0.43
MBD1-220ENST00000589758 ACADSP16219 412 aa12.34□□□□□ -0.43
MBD1-220ENST00000589758 APEX1P27695 318 aaKnown RBP12.34□□□□□ -0.43
MBD1-220ENST00000589758 IFNA8P32881 189 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms