RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 RDH5Q92781 318 aa5.19□□□□□ -1.58
VPS25-204ENST00000589577 SLC47A1Q96FL8 570 aa5.19□□□□□ -1.58
VPS25-204ENST00000589577 HSH2DQ96JZ2 352 aa5.19□□□□□ -1.58
VPS25-204ENST00000589577 CLPTM1LQ96KA5 538 aa5.19□□□□□ -1.58
VPS25-204ENST00000589577 SEPHS2Q99611 448 aa5.19□□□□□ -1.58
VPS25-204ENST00000589577 GPA33Q99795 319 aa5.19□□□□□ -1.58
VPS25-204ENST00000589577 POLR2J2Q9GZM3 115 aaKnown RBP5.19□□□□□ -1.58
VPS25-204ENST00000589577 PCDHAC1Q9H158 963 aa5.19□□□□□ -1.58
VPS25-204ENST00000589577 POLR2J3Q9H1A7 115 aaKnown RBP5.19□□□□□ -1.58
VPS25-204ENST00000589577 MAGIXQ9H6Y5 334 aa5.19□□□□□ -1.58
VPS25-204ENST00000589577 TMEM27Q9HBJ8 222 aa5.19□□□□□ -1.58
VPS25-204ENST00000589577 EXOSC3Q9NQT5 275 aaKnown RBP5.19□□□□□ -1.58
VPS25-204ENST00000589577 SLC7A10Q9NS82 523 aa5.19□□□□□ -1.58
VPS25-204ENST00000589577 DCAF13Q9NV06 445 aaKnown RBP5.19□□□□□ -1.58
VPS25-204ENST00000589577 CRNNQ9UBG3 495 aaPredicted RBP5.19□□□□□ -1.58
VPS25-204ENST00000589577 TESQ9UGI8 421 aaKnown RBP5.19□□□□□ -1.58
VPS25-204ENST00000589577 NOSIPQ9Y314 301 aaKnown RBP5.19□□□□□ -1.58
VPS25-204ENST00000589577 SH3GLB1Q9Y371 365 aa5.19□□□□□ -1.58
VPS25-204ENST00000589577 SPIN1Q9Y657 262 aaPredicted RBP5.19□□□□□ -1.58
VPS25-204ENST00000589577 KCNE3Q9Y6H6 103 aa5.19□□□□□ -1.58
VPS25-204ENST00000589577 V9GYQ6 96 aa5.19□□□□□ -1.58
VPS25-204ENST00000589577 DSPPQ9NZW4 1301 aa5.19□□□□□ -1.58
VPS25-204ENST00000589577 TANC2Q9HCD6 1990 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 C5orf63A6NC05 138 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 GJE1A6NN92 205 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 HOXA3O43365 443 aaPredicted RBP5.18□□□□□ -1.58
VPS25-204ENST00000589577 FKBP6O75344 327 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 E2F6O75461 281 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 UGT2B17O75795 530 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 CLPXO76031 633 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 MFN2O95140 757 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 PPP1R3DO95685 299 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 GPANK1O95872 356 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 OPN1MWP04001 364 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 FABP3P05413 133 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 CELA3BP08861 270 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 OPN1MW2P0DN77 364 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 OPN1MW3P0DN78 364 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 RAP2AP10114 183 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 PRKCAP17252 672 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 RYKP34925 604 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 MSX2P35548 267 aaPredicted RBP5.18□□□□□ -1.58
VPS25-204ENST00000589577 EIF1P41567 113 aaKnown RBP5.18□□□□□ -1.58
VPS25-204ENST00000589577 HTR3AP46098 478 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 GZMMP51124 257 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 P2RX1P51575 399 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 TMEM33P57088 247 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 TAS2R41P59536 307 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 ACTR3P61158 418 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 MVKQ03426 396 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 ZNF117Q03924 483 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 PDK3Q15120 406 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 C2orf68Q2NKX9 166 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 KLHL26Q53HC5 615 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 OXLD1Q5BKU9 147 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 ARMCX4Q5H9R4 360 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 TSPO2Q5TGU0 170 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 ANKRD16Q6P6B7 361 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 CBLN3Q6UW01 205 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 ZNF836Q6ZNA1 936 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 VRK2Q86Y07 508 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 ZDHHC21Q8IVQ6 265 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 WDFY1Q8IWB7 410 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 PIK3C3Q8NEB9 887 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 VANGL1Q8TAA9 524 aaPredicted RBP5.18□□□□□ -1.58
VPS25-204ENST00000589577 DNAJA4Q8WW22 397 aaPredicted RBP5.18□□□□□ -1.58
VPS25-204ENST00000589577 GTF3AQ92664 365 aaKnown RBP5.18□□□□□ -1.58
VPS25-204ENST00000589577 TAMM41Q96BW9 452 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 KTI12Q96EK9 354 aaPredicted RBP5.18□□□□□ -1.58
VPS25-204ENST00000589577 PYURFQ96I23 114 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 BOD1Q96IK1 185 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 ZNF347Q96SE7 839 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 FNDC11Q9BVV2 318 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 MRPL37Q9BZE1 423 aaKnown RBP5.18□□□□□ -1.58
VPS25-204ENST00000589577 NDEL1Q9GZM8 345 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 LAT2Q9GZY6 243 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 QRSL1Q9H0R6 528 aaKnown RBP5.18□□□□□ -1.58
VPS25-204ENST00000589577 VCXQ9H320 206 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 SERINC1Q9NRX5 453 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 NECAP2Q9NVZ3 263 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 TMCC3Q9ULS5 477 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 CARD8Q9Y2G2 431 aa5.18□□□□□ -1.58
VPS25-204ENST00000589577 DNAH7Q8WXX0 4024 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 CDHR4A6H8M9 788 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 NPIPB9F8W1W9 429 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 H0YL77 283 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 FMO6PO60774 539 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 LGI1O95970 557 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 WNT11O96014 354 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 IGHV4-38-2P0DP08 117 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 PNMTP11086 282 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 RHCEP18577 417 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 ATP6V1B2P21281 511 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 RPS4Y1P22090 263 aaKnown RBP5.17□□□□□ -1.58
VPS25-204ENST00000589577 CXCR1P25024 350 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 FASP25445 335 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 FKBP2P26885 142 aaKnown RBP5.17□□□□□ -1.58
VPS25-204ENST00000589577 GTF2E2P29084 291 aaKnown RBP5.17□□□□□ -1.58
VPS25-204ENST00000589577 SLC7A1P30825 629 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 RRM2P31350 389 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms