RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 THEM4Q5T1C6 240 aa12.74□□□□□ -0.37
SF3A2-204ENST00000589118 SPATC1Q76KD6 591 aa12.74□□□□□ -0.37
SF3A2-204ENST00000589118 PIWIL3Q7Z3Z3 882 aaKnown RBP12.74□□□□□ -0.37
SF3A2-204ENST00000589118 TREML1Q86YW5 311 aa12.74□□□□□ -0.37
SF3A2-204ENST00000589118 C10orf111Q8N326 155 aa12.74□□□□□ -0.37
SF3A2-204ENST00000589118 LRRC18Q8N456 261 aa12.74□□□□□ -0.37
SF3A2-204ENST00000589118 ADPRHL1Q8NDY3 354 aa12.74□□□□□ -0.37
SF3A2-204ENST00000589118 CPEB3Q8NE35 698 aaKnown RBP12.74□□□□□ -0.37
SF3A2-204ENST00000589118 ASPNQ9BXN1 380 aa12.74□□□□□ -0.37
SF3A2-204ENST00000589118 SLITRK2Q9H156 845 aa12.74□□□□□ -0.37
SF3A2-204ENST00000589118 DENND2DQ9H6A0 471 aaPredicted RBP12.74□□□□□ -0.37
SF3A2-204ENST00000589118 TMEM38BQ9NVV0 291 aa12.74□□□□□ -0.37
SF3A2-204ENST00000589118 GLTPQ9NZD2 209 aa12.74□□□□□ -0.37
SF3A2-204ENST00000589118 GPR160Q9UJ42 338 aa12.74□□□□□ -0.37
SF3A2-204ENST00000589118 IFT52Q9Y366 437 aa12.74□□□□□ -0.37
SF3A2-204ENST00000589118 SASH3O75995 380 aa12.73□□□□□ -0.37
SF3A2-204ENST00000589118 TGDSO95455 350 aa12.73□□□□□ -0.37
SF3A2-204ENST00000589118 IGHV3-13P01766 116 aa12.73□□□□□ -0.37
SF3A2-204ENST00000589118 ADORA3P0DMS8 318 aa12.73□□□□□ -0.37
SF3A2-204ENST00000589118 KITP10721 976 aa12.73□□□□□ -0.37
SF3A2-204ENST00000589118 IDO1P14902 403 aa12.73□□□□□ -0.37
SF3A2-204ENST00000589118 WNT5AP41221 380 aa12.73□□□□□ -0.37
SF3A2-204ENST00000589118 MRPL19P49406 292 aaKnown RBP12.73□□□□□ -0.37
SF3A2-204ENST00000589118 MMP15P51511 669 aa12.73□□□□□ -0.37
SF3A2-204ENST00000589118 PDCD4Q53EL6 469 aaKnown RBP12.73□□□□□ -0.37
SF3A2-204ENST00000589118 SLC35D2Q76EJ3 337 aa12.73□□□□□ -0.37
SF3A2-204ENST00000589118 ZNF101Q8IZC7 436 aa12.73□□□□□ -0.37
SF3A2-204ENST00000589118 LSMEM1Q8N8F7 131 aa12.73□□□□□ -0.37
SF3A2-204ENST00000589118 IPCEF1Q8WWN9 437 aaPredicted RBP12.73□□□□□ -0.37
SF3A2-204ENST00000589118 STON2Q8WXE9 905 aa12.73□□□□□ -0.37
SF3A2-204ENST00000589118 POP5Q969H6 163 aaKnown RBP12.73□□□□□ -0.37
SF3A2-204ENST00000589118 SLC25A28Q96A46 364 aa12.73□□□□□ -0.37
SF3A2-204ENST00000589118 ELMOD3Q96FG2 381 aa12.73□□□□□ -0.37
SF3A2-204ENST00000589118 GPA33Q99795 319 aa12.73□□□□□ -0.37
SF3A2-204ENST00000589118 MS4A7Q9GZW8 240 aaPredicted RBP12.73□□□□□ -0.37
SF3A2-204ENST00000589118 ARMC7Q9H6L4 198 aa12.73□□□□□ -0.37
SF3A2-204ENST00000589118 MRPL39Q9NYK5 338 aaKnown RBP12.73□□□□□ -0.37
SF3A2-204ENST00000589118 SLC22A23A1A5C7 686 aa12.72□□□□□ -0.37
SF3A2-204ENST00000589118 DHHO43323 396 aa12.72□□□□□ -0.37
SF3A2-204ENST00000589118 FOXH1O75593 365 aa12.72□□□□□ -0.37
SF3A2-204ENST00000589118 QDPRP09417 244 aa12.72□□□□□ -0.37
SF3A2-204ENST00000589118 ZNF12P17014 697 aa12.72□□□□□ -0.37
SF3A2-204ENST00000589118 CDH12P55289 794 aa12.72□□□□□ -0.37
SF3A2-204ENST00000589118 OR1Q1Q15612 314 aa12.72□□□□□ -0.37
SF3A2-204ENST00000589118 TMEM53Q6P2H8 277 aa12.72□□□□□ -0.37
SF3A2-204ENST00000589118 ULK3Q6PHR2 472 aa12.72□□□□□ -0.37
SF3A2-204ENST00000589118 EPGNQ6UW88 154 aa12.72□□□□□ -0.37
SF3A2-204ENST00000589118 SLC16A14Q7RTX9 510 aa12.72□□□□□ -0.37
SF3A2-204ENST00000589118 PXKQ7Z7A4 578 aa12.72□□□□□ -0.37
SF3A2-204ENST00000589118 NFKBIDQ8NI38 313 aa12.72□□□□□ -0.37
SF3A2-204ENST00000589118 SLC25A40Q8TBP6 338 aa12.72□□□□□ -0.37
SF3A2-204ENST00000589118 LRRC8CQ8TDW0 803 aa12.72□□□□□ -0.37
SF3A2-204ENST00000589118 SLC47A1Q96FL8 570 aa12.72□□□□□ -0.37
SF3A2-204ENST00000589118 CCT8L2Q96SF2 557 aa12.72□□□□□ -0.37
SF3A2-204ENST00000589118 C12orf10Q9HB07 376 aa12.72□□□□□ -0.37
SF3A2-204ENST00000589118 CACYBPQ9HB71 228 aaKnown RBP12.72□□□□□ -0.37
SF3A2-204ENST00000589118 MSL2Q9HCI7 577 aa12.72□□□□□ -0.37
SF3A2-204ENST00000589118 TCF7L2Q9NQB0 619 aa12.72□□□□□ -0.37
SF3A2-204ENST00000589118 SDR39U1Q9NRG7 319 aaPredicted RBP12.72□□□□□ -0.37
SF3A2-204ENST00000589118 TAS2R5Q9NYW4 299 aa12.72□□□□□ -0.37
SF3A2-204ENST00000589118 PRDM4Q9UKN5 801 aa12.72□□□□□ -0.37
SF3A2-204ENST00000589118 INSIG2Q9Y5U4 225 aa12.72□□□□□ -0.37
SF3A2-204ENST00000589118 USH1CQ9Y6N9 552 aa12.72□□□□□ -0.37
SF3A2-204ENST00000589118 IGHV2-70P01814 119 aa12.71□□□□□ -0.37
SF3A2-204ENST00000589118 CD80P33681 288 aa12.71□□□□□ -0.37
SF3A2-204ENST00000589118 RGNQ15493 299 aa12.71□□□□□ -0.37
SF3A2-204ENST00000589118 TBC1D28Q2M2D7 210 aa12.71□□□□□ -0.37
SF3A2-204ENST00000589118 MMEL1Q495T6 779 aa12.71□□□□□ -0.37
SF3A2-204ENST00000589118 RHOUQ7L0Q8 258 aa12.71□□□□□ -0.37
SF3A2-204ENST00000589118 SNX32Q86XE0 403 aa12.71□□□□□ -0.37
SF3A2-204ENST00000589118 SCAIQ8N9R8 606 aa12.71□□□□□ -0.37
SF3A2-204ENST00000589118 OR9I1Q8NGQ6 314 aa12.71□□□□□ -0.37
SF3A2-204ENST00000589118 DNAJA4Q8WW22 397 aaPredicted RBP12.71□□□□□ -0.37
SF3A2-204ENST00000589118 ZNF347Q96SE7 839 aa12.71□□□□□ -0.37
SF3A2-204ENST00000589118 ZBTB18Q99592 522 aa12.71□□□□□ -0.37
SF3A2-204ENST00000589118 BCL2L14Q9BZR8 327 aa12.71□□□□□ -0.37
SF3A2-204ENST00000589118 BCL2L10Q9HD36 194 aa12.71□□□□□ -0.37
SF3A2-204ENST00000589118 INTS9Q9NV88 658 aaKnown RBP12.71□□□□□ -0.37
SF3A2-204ENST00000589118 ZIM2Q9NZV7 527 aa12.71□□□□□ -0.37
SF3A2-204ENST00000589118 FBXL3Q9UKT7 428 aa12.71□□□□□ -0.37
SF3A2-204ENST00000589118 NPTNQ9Y639 398 aa12.71□□□□□ -0.37
SF3A2-204ENST00000589118 LOC100509620A0A075B734 347 aa12.7□□□□□ -0.38
SF3A2-204ENST00000589118 A0A0B4J2E0 115 aa12.7□□□□□ -0.38
SF3A2-204ENST00000589118 A0A1B0GX12 115 aa12.7□□□□□ -0.38
SF3A2-204ENST00000589118 HOXA3O43365 443 aaPredicted RBP12.7□□□□□ -0.38
SF3A2-204ENST00000589118 MFN2O95140 757 aa12.7□□□□□ -0.38
SF3A2-204ENST00000589118 SNAP29O95721 258 aa12.7□□□□□ -0.38
SF3A2-204ENST00000589118 IGHMP01871 453 aa12.7□□□□□ -0.38
SF3A2-204ENST00000589118 IL6P05231 212 aa12.7□□□□□ -0.38
SF3A2-204ENST00000589118 MMP7P09237 267 aaPredicted RBP12.7□□□□□ -0.38
SF3A2-204ENST00000589118 GCH1P30793 250 aa12.7□□□□□ -0.38
SF3A2-204ENST00000589118 CDAP32320 146 aa12.7□□□□□ -0.38
SF3A2-204ENST00000589118 SLC6A9P48067 706 aa12.7□□□□□ -0.38
SF3A2-204ENST00000589118 PABPC1L2AQ5JQF8 200 aa12.7□□□□□ -0.38
SF3A2-204ENST00000589118 C6orf10Q5SRN2 563 aa12.7□□□□□ -0.38
SF3A2-204ENST00000589118 C16orf87Q6PH81 154 aa12.7□□□□□ -0.38
SF3A2-204ENST00000589118 SLC2A7Q6PXP3 512 aa12.7□□□□□ -0.38
SF3A2-204ENST00000589118 C5orf46Q6UWT4 87 aa12.7□□□□□ -0.38
SF3A2-204ENST00000589118 MSANTD1Q6ZTZ1 278 aa12.7□□□□□ -0.38
SF3A2-204ENST00000589118 SYT14Q8NB59 555 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms