RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 DAPL1A0PJW8 107 aa19.77■□□□□ 0.76
ATG4D-209ENST00000588857 WISP2O76076 250 aa19.77■□□□□ 0.76
ATG4D-209ENST00000588857 LCKP06239 509 aa19.77■□□□□ 0.76
ATG4D-209ENST00000588857 CSNK1A1P48729 337 aa19.77■□□□□ 0.76
ATG4D-209ENST00000588857 RAB39AQ14964 217 aa19.77■□□□□ 0.76
ATG4D-209ENST00000588857 RNPS1Q15287 305 aaKnown RBP19.77■□□□□ 0.76
ATG4D-209ENST00000588857 ERI1Q8IV48 349 aaKnown RBP19.77■□□□□ 0.76
ATG4D-209ENST00000588857 NANOGP1Q8N7R0 232 aa19.77■□□□□ 0.76
ATG4D-209ENST00000588857 OR6N1Q8NGY5 312 aa19.77■□□□□ 0.76
ATG4D-209ENST00000588857 TMIGD2Q96BF3 282 aa19.77■□□□□ 0.76
ATG4D-209ENST00000588857 TBX5Q99593 518 aa19.77■□□□□ 0.76
ATG4D-209ENST00000588857 SLC25A18Q9H1K4 315 aa19.77■□□□□ 0.76
ATG4D-209ENST00000588857 GTF3C1Q12789 2109 aa19.76■□□□□ 0.75
ATG4D-209ENST00000588857 IGKV3D-15A0A087WSY6 115 aa19.76■□□□□ 0.75
ATG4D-209ENST00000588857 OR14I1A6ND48 311 aa19.76■□□□□ 0.75
ATG4D-209ENST00000588857 TVP23AA6NH52 213 aa19.76■□□□□ 0.75
ATG4D-209ENST00000588857 A6NHS1 94 aa19.76■□□□□ 0.75
ATG4D-209ENST00000588857 SLC22A20A6NK97 555 aa19.76■□□□□ 0.75
ATG4D-209ENST00000588857 SELENOFO60613 162 aa19.76■□□□□ 0.75
ATG4D-209ENST00000588857 AQP8O94778 261 aa19.76■□□□□ 0.75
ATG4D-209ENST00000588857 OR2T7P0C7T2 308 aa19.76■□□□□ 0.75
ATG4D-209ENST00000588857 LIMS3P0CW19 117 aa19.76■□□□□ 0.75
ATG4D-209ENST00000588857 LIMS4P0CW20 117 aa19.76■□□□□ 0.75
ATG4D-209ENST00000588857 PSMB9P28065 219 aa19.76■□□□□ 0.75
ATG4D-209ENST00000588857 TTKP33981 857 aa19.76■□□□□ 0.75
ATG4D-209ENST00000588857 MED22Q15528 200 aa19.76■□□□□ 0.75
ATG4D-209ENST00000588857 ETFDHQ16134 617 aa19.76■□□□□ 0.75
ATG4D-209ENST00000588857 LYPD4Q6UWN0 246 aa19.76■□□□□ 0.75
ATG4D-209ENST00000588857 ZNF367Q7RTV3 350 aa19.76■□□□□ 0.75
ATG4D-209ENST00000588857 AAED1Q7RTV5 226 aa19.76■□□□□ 0.75
ATG4D-209ENST00000588857 MCEMP1Q8IX19 187 aa19.76■□□□□ 0.75
ATG4D-209ENST00000588857 SLC35F2Q8IXU6 374 aa19.76■□□□□ 0.75
ATG4D-209ENST00000588857 OR2T27Q8NH04 317 aa19.76■□□□□ 0.75
ATG4D-209ENST00000588857 NSMAFQ92636 917 aa19.76■□□□□ 0.75
ATG4D-209ENST00000588857 INTS12Q96CB8 462 aaKnown RBP19.76■□□□□ 0.75
ATG4D-209ENST00000588857 GPR137Q96N19 417 aa19.76■□□□□ 0.75
ATG4D-209ENST00000588857 ERVK13-1Q9NX77 482 aa19.76■□□□□ 0.75
ATG4D-209ENST00000588857 COA3Q9Y2R0 106 aaPredicted RBP19.76■□□□□ 0.75
ATG4D-209ENST00000588857 ZNF175Q9Y473 711 aa19.76■□□□□ 0.75
ATG4D-209ENST00000588857 TMEM129A0AVI4 362 aa19.75■□□□□ 0.75
ATG4D-209ENST00000588857 ZNF432O94892 652 aa19.75■□□□□ 0.75
ATG4D-209ENST00000588857 FCGR2AP12318 317 aa19.75■□□□□ 0.75
ATG4D-209ENST00000588857 SELENOPP49908 381 aa19.75■□□□□ 0.75
ATG4D-209ENST00000588857 HIST3H3Q16695 136 aa19.75■□□□□ 0.75
ATG4D-209ENST00000588857 KRTCAP3Q53RY4 240 aa19.75■□□□□ 0.75
ATG4D-209ENST00000588857 PLXDC2Q6UX71 529 aa19.75■□□□□ 0.75
ATG4D-209ENST00000588857 SLC16A9Q7RTY1 509 aa19.75■□□□□ 0.75
ATG4D-209ENST00000588857 TMEM123Q8N131 208 aa19.75■□□□□ 0.75
ATG4D-209ENST00000588857 KLHL36Q8N4N3 616 aa19.75■□□□□ 0.75
ATG4D-209ENST00000588857 SMAP2Q8WU79 429 aaPredicted RBP19.75■□□□□ 0.75
ATG4D-209ENST00000588857 INTS14Q96SY0 518 aa19.75■□□□□ 0.75
ATG4D-209ENST00000588857 GLTPQ9NZD2 209 aa19.75■□□□□ 0.75
ATG4D-209ENST00000588857 B8ZZF3 427 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 SLC43A1O75387 559 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 TFP02787 698 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 QDPRP09417 244 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 NFATC3Q12968 1075 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 SYT6Q5T7P8 510 aaPredicted RBP19.74■□□□□ 0.75
ATG4D-209ENST00000588857 TIGD4Q8IY51 512 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 TEX19Q8NA77 164 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 Q8NA96 180 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 TMEM54Q969K7 222 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 MCHR2Q969V1 340 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 NMD3Q96D46 503 aaKnown RBP19.74■□□□□ 0.75
ATG4D-209ENST00000588857 FOXN4Q96NZ1 517 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 NDUFA13Q9P0J0 144 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 ING1Q9UK53 422 aaPredicted RBP19.74■□□□□ 0.75
ATG4D-209ENST00000588857 NOSIPQ9Y314 301 aaKnown RBP19.74■□□□□ 0.75
ATG4D-209ENST00000588857 BSNQ9UPA5 3926 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 A0A1W2PQL4 384 aaPredicted RBP19.74■□□□□ 0.75
ATG4D-209ENST00000588857 SEC14L2O76054 403 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 GPANK1O95872 356 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 GP2P55259 537 aaKnown RBP19.74■□□□□ 0.75
ATG4D-209ENST00000588857 GALEQ14376 348 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 SPHARQ15513 63 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 TMPRSS11AQ6ZMR5 421 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 P4HA3Q7Z4N8 544 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 GLB1L2Q8IW92 636 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 OR5M9Q8NGP3 310 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 OR13F1Q8NGS4 319 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 TMEM45BQ96B21 275 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 COG8Q96MW5 612 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 OR5M11Q96RB7 305 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 ALG8Q9BVK2 526 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 MARCH7Q9H992 704 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 RNF122Q9H9V4 155 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 PARPBPQ9NWS1 579 aa19.74■□□□□ 0.75
ATG4D-209ENST00000588857 PHF3Q92576 2039 aaKnown RBP19.73■□□□□ 0.75
ATG4D-209ENST00000588857 CFAP46Q8IYW2 2715 aa19.73■□□□□ 0.75
ATG4D-209ENST00000588857 IGKV1D-43A0A0B4J1Z2 117 aa19.73■□□□□ 0.75
ATG4D-209ENST00000588857 SMIM31A0A1B0GVY4 71 aa19.73■□□□□ 0.75
ATG4D-209ENST00000588857 ZNF724A8MTY0 619 aa19.73■□□□□ 0.75
ATG4D-209ENST00000588857 HSMCR30P0CW71 290 aa19.73■□□□□ 0.75
ATG4D-209ENST00000588857 PTGS2P35354 604 aa19.73■□□□□ 0.75
ATG4D-209ENST00000588857 HCCSP53701 268 aa19.73■□□□□ 0.75
ATG4D-209ENST00000588857 WNT4P56705 351 aa19.73■□□□□ 0.75
ATG4D-209ENST00000588857 TIGD6Q17RP2 521 aa19.73■□□□□ 0.75
ATG4D-209ENST00000588857 LRFN4Q6PJG9 635 aa19.73■□□□□ 0.75
ATG4D-209ENST00000588857 SLC25A47Q6Q0C1 308 aa19.73■□□□□ 0.75
ATG4D-209ENST00000588857 TUSC5Q8IXB3 177 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms